Protein–RNA interactions for Protein: Q9Y221

NIP7, 60S ribosome subunit biogenesis protein NIP7 homolog, humanhuman

Known RBP eCLIP

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7Q9Y221 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.244e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-212ENST00000548551 543 ntTSL 213.35□□□□□ -0.274e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-221ENST00000551258 966 ntTSL 513.32□□□□□ -0.284e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-224ENST00000551914 402 ntTSL 313.16□□□□□ -0.34e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-213ENST00000548568 1127 ntTSL 1 (best)12.93□□□□□ -0.344e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-208ENST00000547191 680 ntTSL 512.93□□□□□ -0.344e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-210ENST00000547475 792 ntTSL 312.82□□□□□ -0.364e-6■□□□□ 10.9
NIP7Q9Y221 CYB5R3-202ENST00000361740 2938 ntTSL 2 BASIC12.41□□□□□ -0.424e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-211ENST00000548495 651 ntTSL 312.23□□□□□ -0.454e-6■□□□□ 10.9
NIP7Q9Y221 ERBB2-204ENST00000541774 4341 ntTSL 5 BASIC11.95□□□□□ -0.54e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-207ENST00000547173 864 ntTSL 310.96□□□□□ -0.654e-6■□□□□ 10.9
NIP7Q9Y221 AL512328.1-201ENST00000412344 536 ntTSL 3 BASIC14.09□□□□□ -0.159e-11■□□□□ 10.8
NIP7Q9Y221 POR-224ENST00000496888 939 ntTSL 221.86■■□□□ 1.093e-7■□□□□ 10.8
NIP7Q9Y221 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.753e-7■□□□□ 10.8
NIP7Q9Y221 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.48■□□□□ 0.713e-7■□□□□ 10.8
NIP7Q9Y221 POR-221ENST00000487247 853 ntTSL 219.08■□□□□ 0.643e-7■□□□□ 10.8
NIP7Q9Y221 POR-223ENST00000495770 559 ntTSL 219.05■□□□□ 0.643e-7■□□□□ 10.8
NIP7Q9Y221 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.57■□□□□ 0.563e-7■□□□□ 10.8
NIP7Q9Y221 POR-217ENST00000460892 603 ntTSL 217.39■□□□□ 0.373e-7■□□□□ 10.8
NIP7Q9Y221 A2M-210ENST00000542567 563 ntTSL 49.08□□□□□ -0.964e-18■□□□□ 10.8
NIP7Q9Y221 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.651e-9■□□□□ 10.7
NIP7Q9Y221 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.631e-9■□□□□ 10.7
NIP7Q9Y221 FN1-220ENST00000480024 576 ntTSL 28.83□□□□□ -14e-46■□□□□ 10.6
NIP7Q9Y221 RPL4-207ENST00000564647 1110 ntTSL 26.89□□□□□ -1.311e-323■□□□□ 10.6
NIP7Q9Y221 snoU18.1-201ENST00000629629 71 ntBASIC1.06□□□□□ -2.241e-323■□□□□ 10.6
NIP7Q9Y221 SNORD18B-201ENST00000365659 72 ntBASIC0.44□□□□□ -2.341e-323■□□□□ 10.6
NIP7Q9Y221 TF-211ENST00000485977 580 ntTSL 324.18■■□□□ 1.463e-17■□□□□ 10.6
NIP7Q9Y221 TF-201ENST00000402696 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.13e-17■□□□□ 10.6
NIP7Q9Y221 SNORD116-25-201ENST00000516517 92 ntBASIC0.7□□□□□ -2.35e-21■□□□□ 10.6
NIP7Q9Y221 SNORD116-15-201ENST00000384445 92 ntBASIC-0.1□□□□□ -2.432e-12■□□□□ 10.5
NIP7Q9Y221 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.241e-20■□□□□ 10.5
NIP7Q9Y221 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.024e-8■□□□□ 10.4
NIP7Q9Y221 ATP1A1-211ENST00000537345 3763 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.314e-8■□□□□ 10.4
NIP7Q9Y221 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.39□□□□□ -1.234e-8■□□□□ 10.4
NIP7Q9Y221 RPL13A-205ENST00000474171 521 ntTSL 214.78□□□□□ -0.041e-74■□□□□ 10.4
NIP7Q9Y221 RPL13A-207ENST00000476300 619 ntTSL 312.63□□□□□ -0.391e-74■□□□□ 10.4
NIP7Q9Y221 RPL13A-203ENST00000468655 407 ntTSL 212.16□□□□□ -0.461e-74■□□□□ 10.4
NIP7Q9Y221 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.711e-6■□□□□ 10.4
NIP7Q9Y221 SERPINF1-203ENST00000570820 820 ntTSL 217.15■□□□□ 0.347e-10■□□□□ 10.4
NIP7Q9Y221 SERPINF1-207ENST00000572048 573 ntTSL 212.74□□□□□ -0.377e-10■□□□□ 10.4
NIP7Q9Y221 SERPINF1-209ENST00000573763 729 ntTSL 310.51□□□□□ -0.737e-10■□□□□ 10.4
NIP7Q9Y221 GPC3-203ENST00000406757 836 ntTSL 210.51□□□□□ -0.733e-13■□□□□ 10.4
NIP7Q9Y221 C3-206ENST00000596179 280 ntTSL 31.95□□□□□ -2.11e-24■□□□□ 10.3
NIP7Q9Y221 TF-202ENST00000414694 546 ntTSL 424.18■■□□□ 1.468e-63■□□□□ 10.3
NIP7Q9Y221 TF-203ENST00000460531 577 ntTSL 424.18■■□□□ 1.468e-63■□□□□ 10.3
NIP7Q9Y221 TF-212ENST00000493011 999 ntTSL 224.18■■□□□ 1.468e-63■□□□□ 10.3
NIP7Q9Y221 TF-213ENST00000494430 594 ntTSL 424.18■■□□□ 1.468e-63■□□□□ 10.3
NIP7Q9Y221 TF-208ENST00000474287 645 ntTSL 223.02■■□□□ 1.288e-63■□□□□ 10.3
NIP7Q9Y221 TF-206ENST00000466911 526 ntTSL 420.84■□□□□ 0.938e-63■□□□□ 10.3
NIP7Q9Y221 TF-209ENST00000475382 586 ntTSL 411.63□□□□□ -0.558e-63■□□□□ 10.3
NIP7Q9Y221 TF-214ENST00000498622 719 ntTSL 210.92□□□□□ -0.668e-63■□□□□ 10.3
NIP7Q9Y221 TFP1-201ENST00000460564 572 ntTSL 4 BASIC9.35□□□□□ -0.918e-63■□□□□ 10.3
NIP7Q9Y221 SNORD4A-201ENST00000459174 72 ntBASIC-0.26□□□□□ -2.458e-40■□□□□ 10.2
NIP7Q9Y221 FN1-226ENST00000496542 695 ntTSL 217.08■□□□□ 0.322e-32■□□□□ 10.2
NIP7Q9Y221 C3-208ENST00000596548 576 ntTSL 33.43□□□□□ -1.868e-23■□□□□ 10.2
NIP7Q9Y221 FN1-217ENST00000471193 496 ntTSL 314.64□□□□□ -0.074e-53■□□□□ 10.2
NIP7Q9Y221 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC21.31■■□□□ 13e-23■□□□□ 10.2
NIP7Q9Y221 RPS3A-209ENST00000510993 762 ntTSL 517.05■□□□□ 0.323e-23■□□□□ 10.2
NIP7Q9Y221 RPS3A-206ENST00000507485 1526 ntTSL 1 (best)11.99□□□□□ -0.493e-23■□□□□ 10.2
NIP7Q9Y221 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.63e-23■□□□□ 10.2
NIP7Q9Y221 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC7.18□□□□□ -1.263e-23■□□□□ 10.2
NIP7Q9Y221 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.14□□□□□ -1.593e-23■□□□□ 10.2
NIP7Q9Y221 RPS3A-211ENST00000512797 686 ntTSL 24.14□□□□□ -1.753e-23■□□□□ 10.2
NIP7Q9Y221 RPS3A-214ENST00000515818 572 ntTSL 53.58□□□□□ -1.843e-23■□□□□ 10.2
NIP7Q9Y221 RPS3A-205ENST00000507327 674 ntTSL 23.47□□□□□ -1.853e-23■□□□□ 10.2
NIP7Q9Y221 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.61□□□□□ -1.993e-23■□□□□ 10.2
NIP7Q9Y221 RPS3A-213ENST00000515792 671 ntTSL 32.61□□□□□ -1.993e-23■□□□□ 10.2
NIP7Q9Y221 SNORD73A-201ENST00000386062 65 ntBASIC2.12□□□□□ -2.073e-23■□□□□ 10.2
NIP7Q9Y221 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.693e-10■□□□□ 10.1
NIP7Q9Y221 RPL13A-208ENST00000477613 796 ntTSL 522.84■■□□□ 1.256e-75■□□□□ 10.1
NIP7Q9Y221 RPL13A-206ENST00000476268 1623 ntTSL 322.02■■□□□ 1.126e-75■□□□□ 10.1
NIP7Q9Y221 RPL13A-209ENST00000479992 850 ntTSL 320.62■□□□□ 0.896e-75■□□□□ 10.1
NIP7Q9Y221 RPL13A-202ENST00000467825 660 ntTSL 519.75■□□□□ 0.756e-75■□□□□ 10.1
NIP7Q9Y221 RPL13A-204ENST00000472481 728 ntTSL 219.6■□□□□ 0.736e-75■□□□□ 10.1
NIP7Q9Y221 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.76e-75■□□□□ 10.1
NIP7Q9Y221 RPL13A-214ENST00000624069 1122 ntTSL 1 (best)19.42■□□□□ 0.76e-75■□□□□ 10.1
NIP7Q9Y221 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC17.98■□□□□ 0.476e-75■□□□□ 10.1
NIP7Q9Y221 RPL13A-210ENST00000484279 794 ntTSL 517.98■□□□□ 0.476e-75■□□□□ 10.1
NIP7Q9Y221 RPL13A-212ENST00000488946 2312 ntTSL 216.76■□□□□ 0.276e-75■□□□□ 10.1
NIP7Q9Y221 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC26.78■■□□□ 1.882e-10■□□□□ 10.1
NIP7Q9Y221 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.771e-6■□□□□ 10.1
NIP7Q9Y221 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.762e-10■□□□□ 10.1
NIP7Q9Y221 BAG6-250ENST00000451898 993 ntTSL 324.64■■□□□ 1.541e-6■□□□□ 10.1
NIP7Q9Y221 CTSD-209ENST00000637158 1200 ntTSL 524.24■■□□□ 1.474e-13■□□□□ 10.1
NIP7Q9Y221 IER3-202ENST00000376377 1350 ntBASIC24.24■■□□□ 1.471e-6■□□□□ 10.1
NIP7Q9Y221 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.432e-10■□□□□ 10.1
NIP7Q9Y221 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.321e-6■□□□□ 10.1
NIP7Q9Y221 BAG6-243ENST00000434444 766 ntTSL 322.74■■□□□ 1.231e-6■□□□□ 10.1
NIP7Q9Y221 BAG6-248ENST00000441054 654 ntTSL 322.74■■□□□ 1.231e-6■□□□□ 10.1
NIP7Q9Y221 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.131e-6■□□□□ 10.1
NIP7Q9Y221 BAG6-240ENST00000424480 1056 ntTSL 222.05■■□□□ 1.121e-6■□□□□ 10.1
NIP7Q9Y221 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.074e-13■□□□□ 10.1
NIP7Q9Y221 RPL29-208ENST00000492277 537 ntTSL 321.51■■□□□ 1.032e-10■□□□□ 10.1
NIP7Q9Y221 CTSD-205ENST00000438213 946 ntTSL 221.12■□□□□ 0.974e-13■□□□□ 10.1
NIP7Q9Y221 AC068580.4-204ENST00000427721 1007 ntTSL 221.01■□□□□ 0.954e-13■□□□□ 10.1
NIP7Q9Y221 CTSD-204ENST00000433655 2006 ntTSL 519.94■□□□□ 0.784e-13■□□□□ 10.1
NIP7Q9Y221 BAG6-251ENST00000452994 880 ntTSL 319.94■□□□□ 0.781e-6■□□□□ 10.1
NIP7Q9Y221 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.754e-13■□□□□ 10.1
NIP7Q9Y221 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.744e-13■□□□□ 10.1
NIP7Q9Y221 CTSD-202ENST00000367196 907 ntTSL 519.56■□□□□ 0.724e-13■□□□□ 10.1
Retrieved 100 of 1,619 protein–RNA pairs in 181.8 ms