RNA–Protein interactions for RNA: ENST00000468655.1

RPL13A-203, Transcript of ribosomal protein L13a, humanhuman

TSL 2

Gene RPL13A, Length 407 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-203ENST00000468655 NISCHQ9Y2I1 1504 aa23.32■■□□□ 1.32
RPL13A-203ENST00000468655 ABCC9O60706 1549 aa21.92■■□□□ 1.1
RPL13A-203ENST00000468655 DNAJC5BQ9UF47 199 aa21.25■□□□□ 0.99
RPL13A-203ENST00000468655 CCDC180Q9P1Z9 1646 aa21.22■□□□□ 0.99
RPL13A-203ENST00000468655 RB1CC1Q8TDY2 1594 aa20.56■□□□□ 0.88
RPL13A-203ENST00000468655 PABPN1Q86U42 306 aaKnown RBP eCLIP20.29■□□□□ 0.84
RPL13A-203ENST00000468655 NACADO15069 1562 aa20.26■□□□□ 0.83
RPL13A-203ENST00000468655 DNAJC5Q9H3Z4 198 aa20.07■□□□□ 0.8
RPL13A-203ENST00000468655 UNC13AQ9UPW8 1703 aa20.01■□□□□ 0.79
RPL13A-203ENST00000468655 BICRAQ9NZM4 1560 aa20■□□□□ 0.79
RPL13A-203ENST00000468655 DCAF8L2P0C7V8 631 aa19.91■□□□□ 0.78
RPL13A-203ENST00000468655 CECR2Q9BXF3 1484 aa19.86■□□□□ 0.77
RPL13A-203ENST00000468655 MYO15BQ96JP2 1530 aa19.79■□□□□ 0.76
RPL13A-203ENST00000468655 CC2D2AQ9P2K1 1620 aa19.76■□□□□ 0.75
RPL13A-203ENST00000468655 SHROOM4Q9ULL8 1493 aa19.73■□□□□ 0.75
RPL13A-203ENST00000468655 EIF4G1Q04637 1599 aaKnown RBP19.57■□□□□ 0.72
RPL13A-203ENST00000468655 SCRIBQ14160 1630 aa19.25■□□□□ 0.67
RPL13A-203ENST00000468655 CUX2O14529 1486 aa19.25■□□□□ 0.67
RPL13A-203ENST00000468655 DCAF1Q9Y4B6 1507 aa19.25■□□□□ 0.67
RPL13A-203ENST00000468655 ZCCHC6Q5VYS8 1495 aaKnown RBP19.18■□□□□ 0.66
RPL13A-203ENST00000468655 ERCC6Q03468 1493 aa19■□□□□ 0.63
RPL13A-203ENST00000468655 TRIM41Q8WV44 630 aa18.82■□□□□ 0.6
RPL13A-203ENST00000468655 NCAPD3P42695 1498 aa18.74■□□□□ 0.59
RPL13A-203ENST00000468655 NESP48681 1621 aa18.63■□□□□ 0.57
RPL13A-203ENST00000468655 THOC2Q8NI27 1593 aaKnown RBP18.59■□□□□ 0.57
RPL13A-203ENST00000468655 ATAD2BQ9ULI0 1458 aa18.56■□□□□ 0.56
RPL13A-203ENST00000468655 HMGXB3Q12766 1538 aa18.52■□□□□ 0.56
RPL13A-203ENST00000468655 SMARCA2P51531 1590 aa18.47■□□□□ 0.55
RPL13A-203ENST00000468655 LAMC3Q9Y6N6 1575 aa18.39■□□□□ 0.53
RPL13A-203ENST00000468655 PDS5BQ9NTI5 1447 aa18.33■□□□□ 0.53
RPL13A-203ENST00000468655 BAZ1BQ9UIG0 1483 aaKnown RBP18.33■□□□□ 0.52
RPL13A-203ENST00000468655 SMARCA4P51532 1647 aa18.32■□□□□ 0.52
RPL13A-203ENST00000468655 KIF21AQ7Z4S6 1674 aa18.31■□□□□ 0.52
RPL13A-203ENST00000468655 BAZ1AQ9NRL2 1556 aaPredicted RBP18.24■□□□□ 0.51
RPL13A-203ENST00000468655 OSCARQ8IYS5 282 aa18.22■□□□□ 0.51
RPL13A-203ENST00000468655 MRC2Q9UBG0 1479 aa18.21■□□□□ 0.51
RPL13A-203ENST00000468655 WDR62O43379 1518 aa18.2■□□□□ 0.5
RPL13A-203ENST00000468655 PEG3Q9GZU2 1588 aa18.19■□□□□ 0.5
RPL13A-203ENST00000468655 CADPSQ9ULU8 1353 aa18.12■□□□□ 0.49
RPL13A-203ENST00000468655 RIMBP3CA6NJZ7 1639 aa18.04■□□□□ 0.48
RPL13A-203ENST00000468655 RIMBP3BA6NNM3 1639 aa18.04■□□□□ 0.48
RPL13A-203ENST00000468655 RIMBP3Q9UFD9 1639 aa18.04■□□□□ 0.48
RPL13A-203ENST00000468655 CEP164Q9UPV0 1460 aa17.98■□□□□ 0.47
RPL13A-203ENST00000468655 ARHGEF11O15085 1522 aa17.94■□□□□ 0.46
RPL13A-203ENST00000468655 MROH2BQ7Z745 1585 aa17.94■□□□□ 0.46
RPL13A-203ENST00000468655 FANCD2Q9BXW9 1451 aa17.9■□□□□ 0.46
RPL13A-203ENST00000468655 AEBP2Q6ZN18 517 aaPredicted RBP17.87■□□□□ 0.45
RPL13A-203ENST00000468655 TRHP20396 242 aaPredicted RBP17.85■□□□□ 0.45
RPL13A-203ENST00000468655 CYB5RLQ6IPT4 315 aa17.83■□□□□ 0.44
RPL13A-203ENST00000468655 URB2Q14146 1524 aaKnown RBP17.8■□□□□ 0.44
RPL13A-203ENST00000468655 CFTRP13569 1480 aa17.77■□□□□ 0.44
RPL13A-203ENST00000468655 ARAP1Q96P48 1450 aa17.72■□□□□ 0.43
RPL13A-203ENST00000468655 ZNF608Q9ULD9 1512 aaPredicted RBP17.7■□□□□ 0.42
RPL13A-203ENST00000468655 IFT140Q96RY7 1462 aa17.67■□□□□ 0.42
RPL13A-203ENST00000468655 WIZO95785 1651 aa17.64■□□□□ 0.41
RPL13A-203ENST00000468655 RSF1Q96T23 1441 aaPredicted RBP17.63■□□□□ 0.41
RPL13A-203ENST00000468655 EIF4G3O43432 1585 aaKnown RBP17.54■□□□□ 0.4
RPL13A-203ENST00000468655 CHD1O14646 1710 aa17.5■□□□□ 0.39
RPL13A-203ENST00000468655 TOPBP1Q92547 1522 aa17.47■□□□□ 0.39
RPL13A-203ENST00000468655 FBLN2P98095 1184 aa17.44■□□□□ 0.38
RPL13A-203ENST00000468655 AQRO60306 1485 aaKnown RBP eCLIP17.44■□□□□ 0.389e-19■■■■■ 38.3
RPL13A-203ENST00000468655 TOP2AP11388 1531 aaKnown RBP17.42■□□□□ 0.38
RPL13A-203ENST00000468655 PRDM2Q13029 1718 aa17.42■□□□□ 0.38
RPL13A-203ENST00000468655 ABCC8Q09428 1581 aa17.4■□□□□ 0.38
RPL13A-203ENST00000468655 CLASP1Q7Z460 1538 aa17.37■□□□□ 0.37
RPL13A-203ENST00000468655 TARBP1Q13395 1621 aaKnown RBP17.36■□□□□ 0.37
RPL13A-203ENST00000468655 DNMBPQ6XZF7 1577 aa17.34■□□□□ 0.37
RPL13A-203ENST00000468655 SYNJ1O43426 1573 aa17.27■□□□□ 0.35
RPL13A-203ENST00000468655 POLA1P09884 1462 aaPredicted RBP17.26■□□□□ 0.35
RPL13A-203ENST00000468655 GAPVD1Q14C86 1478 aa17.24■□□□□ 0.35
RPL13A-203ENST00000468655 SNAPC4Q5SXM2 1469 aa17.24■□□□□ 0.35
RPL13A-203ENST00000468655 ILDR1Q86SU0 546 aaPredicted RBP17.23■□□□□ 0.35
RPL13A-203ENST00000468655 CCDC88BA6NC98 1476 aa17.23■□□□□ 0.35
RPL13A-203ENST00000468655 CHMP7Q8WUX9 453 aaPredicted RBP17.22■□□□□ 0.35
RPL13A-203ENST00000468655 TDRD9Q8NDG6 1382 aaKnown RBP17.22■□□□□ 0.35
RPL13A-203ENST00000468655 MAGI1Q96QZ7 1491 aaPredicted RBP17.19■□□□□ 0.34
RPL13A-203ENST00000468655 RAD54L2Q9Y4B4 1467 aa17.18■□□□□ 0.34
RPL13A-203ENST00000468655 WDR97A6NE52 1622 aa17.17■□□□□ 0.34
RPL13A-203ENST00000468655 SOGA1O94964 1423 aa17.15■□□□□ 0.34
RPL13A-203ENST00000468655 SYNJ2O15056 1496 aa17.14■□□□□ 0.33
RPL13A-203ENST00000468655 GRIN2BQ13224 1484 aa17.11■□□□□ 0.33
RPL13A-203ENST00000468655 FGD5Q6ZNL6 1462 aa17.03■□□□□ 0.32
RPL13A-203ENST00000468655 KDM4FA0A1W2PPD8 638 aa17.01■□□□□ 0.31
RPL13A-203ENST00000468655 ERCC6L2Q5T890 1561 aa17.01■□□□□ 0.31
RPL13A-203ENST00000468655 KIF13AQ9H1H9 1805 aa16.98■□□□□ 0.31
RPL13A-203ENST00000468655 CEP170Q5SW79 1584 aa16.92■□□□□ 0.3
RPL13A-203ENST00000468655 PBRM1Q86U86 1689 aa16.91■□□□□ 0.3
RPL13A-203ENST00000468655 CUX1P39880 1505 aa16.9■□□□□ 0.3
RPL13A-203ENST00000468655 GRIN2AQ12879 1464 aa16.88■□□□□ 0.29
RPL13A-203ENST00000468655 ABCC10Q5T3U5 1492 aa16.88■□□□□ 0.29
RPL13A-203ENST00000468655 NUP160Q12769 1436 aa16.87■□□□□ 0.29
RPL13A-203ENST00000468655 FAM69CQ0P6D2 419 aa16.87■□□□□ 0.29
RPL13A-203ENST00000468655 SHROOM2Q13796 1616 aa16.85■□□□□ 0.29
RPL13A-203ENST00000468655 ABCA5Q8WWZ7 1642 aa16.84■□□□□ 0.29
RPL13A-203ENST00000468655 ABCA10Q8WWZ4 1543 aa16.82■□□□□ 0.28
RPL13A-203ENST00000468655 KDM6BO15054 1643 aa16.81■□□□□ 0.28
RPL13A-203ENST00000468655 MAPKBP1O60336 1514 aa16.8■□□□□ 0.28
RPL13A-203ENST00000468655 DIP2BQ9P265 1576 aa16.79■□□□□ 0.28
RPL13A-203ENST00000468655 ADAMTS12P58397 1594 aa16.77■□□□□ 0.27
RPL13A-203ENST00000468655 PRG4Q92954 1404 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms