RNA–Protein interactions for RNA: ENST00000510993.1

RPS3A-209, Transcript of ribosomal protein S3A, humanhuman

TSL 5

Gene RPS3A, Length 762 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-209ENST00000510993 NISCHQ9Y2I1 1504 aa32.81■■■□□ 2.84
RPS3A-209ENST00000510993 CCDC180Q9P1Z9 1646 aa29.54■■■□□ 2.32
RPS3A-209ENST00000510993 ABCC9O60706 1549 aa29.43■■■□□ 2.3
RPS3A-209ENST00000510993 RB1CC1Q8TDY2 1594 aa28.05■■■□□ 2.08
RPS3A-209ENST00000510993 NACADO15069 1562 aa27.88■■■□□ 2.05
RPS3A-209ENST00000510993 DNAJC5BQ9UF47 199 aa27.76■■■□□ 2.03
RPS3A-209ENST00000510993 MYO15BQ96JP2 1530 aa27.59■■■□□ 2.01
RPS3A-209ENST00000510993 UNC13AQ9UPW8 1703 aa27.53■■■□□ 2
RPS3A-209ENST00000510993 BICRAQ9NZM4 1560 aa27.39■■□□□ 1.98
RPS3A-209ENST00000510993 PABPN1Q86U42 306 aaKnown RBP eCLIP27.3■■□□□ 1.96
RPS3A-209ENST00000510993 DCAF8L2P0C7V8 631 aa27.27■■□□□ 1.96
RPS3A-209ENST00000510993 ZCCHC6Q5VYS8 1495 aaKnown RBP27.23■■□□□ 1.95
RPS3A-209ENST00000510993 DCAF1Q9Y4B6 1507 aa27.19■■□□□ 1.94
RPS3A-209ENST00000510993 SHROOM4Q9ULL8 1493 aa27■■□□□ 1.91
RPS3A-209ENST00000510993 SCRIBQ14160 1630 aa26.77■■□□□ 1.88
RPS3A-209ENST00000510993 CC2D2AQ9P2K1 1620 aa26.68■■□□□ 1.86
RPS3A-209ENST00000510993 EIF4G1Q04637 1599 aaKnown RBP26.63■■□□□ 1.85
RPS3A-209ENST00000510993 CECR2Q9BXF3 1484 aa26.55■■□□□ 1.84
RPS3A-209ENST00000510993 AEBP2Q6ZN18 517 aaPredicted RBP26.17■■□□□ 1.78
RPS3A-209ENST00000510993 NCAPD3P42695 1498 aa25.76■■□□□ 1.71
RPS3A-209ENST00000510993 ATAD2BQ9ULI0 1458 aa25.65■■□□□ 1.7
RPS3A-209ENST00000510993 SMARCA4P51532 1647 aa25.63■■□□□ 1.69
RPS3A-209ENST00000510993 HMGXB3Q12766 1538 aa25.6■■□□□ 1.69
RPS3A-209ENST00000510993 SMARCA2P51531 1590 aa25.54■■□□□ 1.68
RPS3A-209ENST00000510993 CUX2O14529 1486 aa25.49■■□□□ 1.67
RPS3A-209ENST00000510993 DNAJC5Q9H3Z4 198 aa25.49■■□□□ 1.67
RPS3A-209ENST00000510993 PEG3Q9GZU2 1588 aa25.48■■□□□ 1.67
RPS3A-209ENST00000510993 BAZ1AQ9NRL2 1556 aaPredicted RBP25.44■■□□□ 1.66
RPS3A-209ENST00000510993 ERCC6Q03468 1493 aa25.34■■□□□ 1.65
RPS3A-209ENST00000510993 NESP48681 1621 aa25.33■■□□□ 1.65
RPS3A-209ENST00000510993 BAZ1BQ9UIG0 1483 aaKnown RBP25.31■■□□□ 1.64
RPS3A-209ENST00000510993 MROH2BQ7Z745 1585 aa25.27■■□□□ 1.64
RPS3A-209ENST00000510993 THOC2Q8NI27 1593 aaKnown RBP25.2■■□□□ 1.62
RPS3A-209ENST00000510993 CHIC1Q5VXU3 224 aa25.19■■□□□ 1.62
RPS3A-209ENST00000510993 LAMC3Q9Y6N6 1575 aa25.16■■□□□ 1.62
RPS3A-209ENST00000510993 KIF21AQ7Z4S6 1674 aa25.04■■□□□ 1.6
RPS3A-209ENST00000510993 WIZO95785 1651 aa24.94■■□□□ 1.58
RPS3A-209ENST00000510993 PDS5BQ9NTI5 1447 aa24.92■■□□□ 1.58
RPS3A-209ENST00000510993 CADPSQ9ULU8 1353 aa24.9■■□□□ 1.58
RPS3A-209ENST00000510993 WDR62O43379 1518 aa24.81■■□□□ 1.56
RPS3A-209ENST00000510993 MRC2Q9UBG0 1479 aa24.77■■□□□ 1.56
RPS3A-209ENST00000510993 RSF1Q96T23 1441 aaPredicted RBP24.69■■□□□ 1.54
RPS3A-209ENST00000510993 CFTRP13569 1480 aa24.67■■□□□ 1.54
RPS3A-209ENST00000510993 TOP2AP11388 1531 aaKnown RBP24.65■■□□□ 1.54
RPS3A-209ENST00000510993 CEP164Q9UPV0 1460 aa24.62■■□□□ 1.53
RPS3A-209ENST00000510993 FANCD2Q9BXW9 1451 aa24.61■■□□□ 1.53
RPS3A-209ENST00000510993 URB2Q14146 1524 aaKnown RBP24.49■■□□□ 1.51
RPS3A-209ENST00000510993 PRDM2Q13029 1718 aa24.44■■□□□ 1.5
RPS3A-209ENST00000510993 CCDC88BA6NC98 1476 aa24.32■■□□□ 1.48
RPS3A-209ENST00000510993 TOPBP1Q92547 1522 aa24.17■■□□□ 1.46
RPS3A-209ENST00000510993 ZNF608Q9ULD9 1512 aaPredicted RBP24.17■■□□□ 1.46
RPS3A-209ENST00000510993 IFT140Q96RY7 1462 aa24.16■■□□□ 1.46
RPS3A-209ENST00000510993 OSCARQ8IYS5 282 aa24.12■■□□□ 1.45
RPS3A-209ENST00000510993 TRIM41Q8WV44 630 aa24.12■■□□□ 1.45
RPS3A-209ENST00000510993 DNMBPQ6XZF7 1577 aa24.09■■□□□ 1.45
RPS3A-209ENST00000510993 EIF4G3O43432 1585 aaKnown RBP24.06■■□□□ 1.44
RPS3A-209ENST00000510993 ABCC8Q09428 1581 aa24.05■■□□□ 1.44
RPS3A-209ENST00000510993 TARBP1Q13395 1621 aaKnown RBP24.05■■□□□ 1.44
RPS3A-209ENST00000510993 RIMBP3CA6NJZ7 1639 aa24.01■■□□□ 1.43
RPS3A-209ENST00000510993 RIMBP3BA6NNM3 1639 aa24.01■■□□□ 1.43
RPS3A-209ENST00000510993 RIMBP3Q9UFD9 1639 aa24.01■■□□□ 1.43
RPS3A-209ENST00000510993 POLA1P09884 1462 aaPredicted RBP23.94■■□□□ 1.42
RPS3A-209ENST00000510993 ARHGEF11O15085 1522 aa23.92■■□□□ 1.42
RPS3A-209ENST00000510993 CHD1O14646 1710 aa23.87■■□□□ 1.41
RPS3A-209ENST00000510993 AQRO60306 1485 aaKnown RBP eCLIP23.87■■□□□ 1.412e-9■■■■■ 54.2
RPS3A-209ENST00000510993 WDR97A6NE52 1622 aa23.79■■□□□ 1.4
RPS3A-209ENST00000510993 RAD54L2Q9Y4B4 1467 aa23.79■■□□□ 1.4
RPS3A-209ENST00000510993 CUX1P39880 1505 aa23.76■■□□□ 1.39
RPS3A-209ENST00000510993 FGD5Q6ZNL6 1462 aa23.73■■□□□ 1.39
RPS3A-209ENST00000510993 ARAP1Q96P48 1450 aa23.7■■□□□ 1.38
RPS3A-209ENST00000510993 SOGA1O94964 1423 aa23.7■■□□□ 1.38
RPS3A-209ENST00000510993 CLASP1Q7Z460 1538 aa23.68■■□□□ 1.38
RPS3A-209ENST00000510993 TDRD9Q8NDG6 1382 aaKnown RBP23.66■■□□□ 1.38
RPS3A-209ENST00000510993 SNAPC4Q5SXM2 1469 aa23.65■■□□□ 1.38
RPS3A-209ENST00000510993 MAGI1Q96QZ7 1491 aaPredicted RBP23.62■■□□□ 1.37
RPS3A-209ENST00000510993 GRIN2BQ13224 1484 aa23.56■■□□□ 1.36
RPS3A-209ENST00000510993 ABCA5Q8WWZ7 1642 aa23.54■■□□□ 1.36
RPS3A-209ENST00000510993 PBRM1Q86U86 1689 aa23.52■■□□□ 1.36
RPS3A-209ENST00000510993 SYNJ2O15056 1496 aa23.52■■□□□ 1.36
RPS3A-209ENST00000510993 CYB5RLQ6IPT4 315 aa23.52■■□□□ 1.36
RPS3A-209ENST00000510993 ABCA10Q8WWZ4 1543 aa23.52■■□□□ 1.36
RPS3A-209ENST00000510993 SYNJ1O43426 1573 aa23.52■■□□□ 1.36
RPS3A-209ENST00000510993 FBLN2P98095 1184 aa23.48■■□□□ 1.35
RPS3A-209ENST00000510993 GAPVD1Q14C86 1478 aa23.46■■□□□ 1.35
RPS3A-209ENST00000510993 BIVM-ERCC5R4GMW8 1640 aa23.38■■□□□ 1.33
RPS3A-209ENST00000510993 CHMP7Q8WUX9 453 aaPredicted RBP23.37■■□□□ 1.33
RPS3A-209ENST00000510993 TOP2BQ02880 1626 aa23.36■■□□□ 1.33
RPS3A-209ENST00000510993 ADAMTS12P58397 1594 aa23.34■■□□□ 1.33
RPS3A-209ENST00000510993 GRIN2AQ12879 1464 aa23.3■■□□□ 1.32
RPS3A-209ENST00000510993 NUP160Q12769 1436 aa23.29■■□□□ 1.32
RPS3A-209ENST00000510993 WRNQ14191 1432 aaPredicted RBP eCLIP23.28■■□□□ 1.32
RPS3A-209ENST00000510993 CEP170Q5SW79 1584 aa23.27■■□□□ 1.32
RPS3A-209ENST00000510993 ERCC6L2Q5T890 1561 aa23.26■■□□□ 1.31
RPS3A-209ENST00000510993 SHROOM2Q13796 1616 aa23.25■■□□□ 1.31
RPS3A-209ENST00000510993 SUPT5HO00267 1087 aaKnown RBP23.21■■□□□ 1.31
RPS3A-209ENST00000510993 ERICH3Q5RHP9 1530 aa23.2■■□□□ 1.3
RPS3A-209ENST00000510993 TRHP20396 242 aaPredicted RBP23.17■■□□□ 1.3
RPS3A-209ENST00000510993 FHAD1B1AJZ9 1412 aa23.16■■□□□ 1.3
RPS3A-209ENST00000510993 RUSC2Q8N2Y8 1516 aa23.03■■□□□ 1.28
RPS3A-209ENST00000510993 PRG4Q92954 1404 aaPredicted RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms