RNA–Protein interactions for RNA: ENST00000512690.5

RPS3A-210, Transcript of ribosomal protein S3A, humanhuman

TSL 3 BASIC

Gene RPS3A, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-210ENST00000512690 AEBP2Q6ZN18 517 aaPredicted RBP20.3■□□□□ 0.84
RPS3A-210ENST00000512690 CHIC1Q5VXU3 224 aa19.38■□□□□ 0.69
RPS3A-210ENST00000512690 SENP3Q9H4L4 574 aaPredicted RBP17.19■□□□□ 0.34
RPS3A-210ENST00000512690 PHF23Q9BUL5 403 aaPredicted RBP17.08■□□□□ 0.32
RPS3A-210ENST00000512690 FOXD1Q16676 465 aa16.13■□□□□ 0.17
RPS3A-210ENST00000512690 PLPPR3Q6T4P5 718 aa15.57■□□□□ 0.08
RPS3A-210ENST00000512690 PPP6R1Q9UPN7 881 aa15.21■□□□□ 0.03
RPS3A-210ENST00000512690 ADRA2BP18089 450 aa15.19■□□□□ 0.02
RPS3A-210ENST00000512690 PIAS4Q8N2W9 510 aaPredicted RBP15.02■□□□□ -0
RPS3A-210ENST00000512690 MSH5O43196 834 aa15.01□□□□□ -0.01
RPS3A-210ENST00000512690 POTEDQ86YR6 584 aa14.87□□□□□ -0.03
RPS3A-210ENST00000512690 MAPK8IP2Q13387 824 aaPredicted RBP13.92□□□□□ -0.18
RPS3A-210ENST00000512690 SCAF1Q9H7N4 1312 aaKnown RBP13.74□□□□□ -0.21
RPS3A-210ENST00000512690 PPP4R3CPQ6ZMV5 832 aa13.74□□□□□ -0.21
RPS3A-210ENST00000512690 DMRT2Q9Y5R5 561 aa13.66□□□□□ -0.22
RPS3A-210ENST00000512690 NISCHQ9Y2I1 1504 aa13.59□□□□□ -0.23
RPS3A-210ENST00000512690 CNKSR2Q8WXI2 1034 aa13.37□□□□□ -0.27
RPS3A-210ENST00000512690 DCAF8L1A6NGE4 600 aa13.21□□□□□ -0.29
RPS3A-210ENST00000512690 NCBP3Q53F19 620 aaKnown RBP13.21□□□□□ -0.29
RPS3A-210ENST00000512690 HOXD11P31277 338 aaPredicted RBP13.2□□□□□ -0.3
RPS3A-210ENST00000512690 RNF216Q9NWF9 866 aaPredicted RBP13.17□□□□□ -0.3
RPS3A-210ENST00000512690 NPM3O75607 178 aaKnown RBP13.09□□□□□ -0.31
RPS3A-210ENST00000512690 KCNA4P22459 653 aa13.09□□□□□ -0.31
RPS3A-210ENST00000512690 CACNB1Q02641 598 aaPredicted RBP12.97□□□□□ -0.33
RPS3A-210ENST00000512690 RNF39Q9H2S5 420 aa12.86□□□□□ -0.35
RPS3A-210ENST00000512690 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.67□□□□□ -0.385e-8■■□□□ 14.3
RPS3A-210ENST00000512690 C1QBPQ07021 282 aaKnown RBP12.63□□□□□ -0.39
RPS3A-210ENST00000512690 DNAJC5BQ9UF47 199 aa12.63□□□□□ -0.39
RPS3A-210ENST00000512690 SLC4A2P04920 1241 aa12.45□□□□□ -0.42
RPS3A-210ENST00000512690 U3KPZ7 1027 aaPredicted RBP12.41□□□□□ -0.42
RPS3A-210ENST00000512690 SLC4A1APQ9BWU0 796 aaKnown RBP12.38□□□□□ -0.43
RPS3A-210ENST00000512690 SPINK5Q9NQ38 1064 aaPredicted RBP12.22□□□□□ -0.45
RPS3A-210ENST00000512690 CAPN15O75808 1086 aa12.17□□□□□ -0.46
RPS3A-210ENST00000512690 CCDC180Q9P1Z9 1646 aa12.1□□□□□ -0.47
RPS3A-210ENST00000512690 FOXD4L1Q9NU39 408 aa12.07□□□□□ -0.48
RPS3A-210ENST00000512690 TRHP20396 242 aaPredicted RBP12.06□□□□□ -0.48
RPS3A-210ENST00000512690 ZBTB22O15209 634 aa12.05□□□□□ -0.48
RPS3A-210ENST00000512690 MYCNP04198 464 aaPredicted RBP12.04□□□□□ -0.48
RPS3A-210ENST00000512690 DSG3P32926 999 aa12.04□□□□□ -0.48
RPS3A-210ENST00000512690 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.03□□□□□ -0.48
RPS3A-210ENST00000512690 HNRNPUL2Q1KMD3 747 aaKnown RBP12.03□□□□□ -0.48
RPS3A-210ENST00000512690 SAMD1Q6SPF0 538 aaPredicted RBP12□□□□□ -0.49
RPS3A-210ENST00000512690 ABCB7O75027 752 aa11.96□□□□□ -0.49
RPS3A-210ENST00000512690 APLP2Q06481 763 aa11.96□□□□□ -0.49
RPS3A-210ENST00000512690 ABCC9O60706 1549 aa11.93□□□□□ -0.5
RPS3A-210ENST00000512690 ZNF219Q9P2Y4 722 aaPredicted RBP11.91□□□□□ -0.5
RPS3A-210ENST00000512690 ATF5Q9Y2D1 282 aaPredicted RBP11.87□□□□□ -0.51
RPS3A-210ENST00000512690 EHMT2Q96KQ7 1210 aa11.76□□□□□ -0.53
RPS3A-210ENST00000512690 POLA2Q14181 598 aa11.75□□□□□ -0.53
RPS3A-210ENST00000512690 CSRNP3Q8WYN3 585 aa11.7□□□□□ -0.54
RPS3A-210ENST00000512690 POTEHQ6S545 545 aa11.61□□□□□ -0.55
RPS3A-210ENST00000512690 ATXN8OSP0DMR3 200 aa11.59□□□□□ -0.55
RPS3A-210ENST00000512690 RB1CC1Q8TDY2 1594 aa11.47□□□□□ -0.57
RPS3A-210ENST00000512690 NACADO15069 1562 aa11.46□□□□□ -0.57
RPS3A-210ENST00000512690 MYO15BQ96JP2 1530 aa11.44□□□□□ -0.58
RPS3A-210ENST00000512690 ZBTB12Q9Y330 459 aaPredicted RBP11.39□□□□□ -0.59
RPS3A-210ENST00000512690 RBM42Q9BTD8 480 aaKnown RBP11.38□□□□□ -0.59
RPS3A-210ENST00000512690 OSCARQ8IYS5 282 aa11.37□□□□□ -0.59
RPS3A-210ENST00000512690 DCAF1Q9Y4B6 1507 aa11.31□□□□□ -0.6
RPS3A-210ENST00000512690 DCAF8L2P0C7V8 631 aa11.31□□□□□ -0.6
RPS3A-210ENST00000512690 FBLN2P98095 1184 aa11.29□□□□□ -0.6
RPS3A-210ENST00000512690 MKRN4PQ13434 485 aaPredicted RBP11.29□□□□□ -0.6
RPS3A-210ENST00000512690 ZCCHC6Q5VYS8 1495 aaKnown RBP11.29□□□□□ -0.6
RPS3A-210ENST00000512690 CHRDL2Q6WN34 429 aa11.23□□□□□ -0.61
RPS3A-210ENST00000512690 AKT1S1Q96B36 256 aa11.17□□□□□ -0.62
RPS3A-210ENST00000512690 PABPN1Q86U42 306 aaKnown RBP eCLIP11.15□□□□□ -0.62
RPS3A-210ENST00000512690 REM2Q8IYK8 340 aaPredicted RBP11.13□□□□□ -0.63
RPS3A-210ENST00000512690 BICRAQ9NZM4 1560 aa11.12□□□□□ -0.63
RPS3A-210ENST00000512690 SHROOM4Q9ULL8 1493 aa11.11□□□□□ -0.63
RPS3A-210ENST00000512690 SPDYE2BA6NHP3 402 aa11.1□□□□□ -0.63
RPS3A-210ENST00000512690 SPDYE6P0CI01 402 aa11.1□□□□□ -0.63
RPS3A-210ENST00000512690 SPDYE2Q495Y8 402 aa11.1□□□□□ -0.63
RPS3A-210ENST00000512690 ZNF692Q9BU19 519 aaPredicted RBP11.09□□□□□ -0.63
RPS3A-210ENST00000512690 UNC13AQ9UPW8 1703 aa11.08□□□□□ -0.64
RPS3A-210ENST00000512690 PITPNM1O00562 1244 aa11.01□□□□□ -0.65
RPS3A-210ENST00000512690 SSUH2Q9Y2M2 353 aa10.99□□□□□ -0.65
RPS3A-210ENST00000512690 PIP4P2Q8N4L2 257 aa10.98□□□□□ -0.65
RPS3A-210ENST00000512690 CLEC11AQ9Y240 323 aa10.96□□□□□ -0.65
RPS3A-210ENST00000512690 SCRIBQ14160 1630 aa10.95□□□□□ -0.66
RPS3A-210ENST00000512690 FXR2P51116 673 aaKnown RBP eCLIP10.89□□□□□ -0.67
RPS3A-210ENST00000512690 SPDYE4A6NLX3 237 aa10.87□□□□□ -0.67
RPS3A-210ENST00000512690 SPDYE1Q8NFV5 336 aaPredicted RBP10.87□□□□□ -0.67
RPS3A-210ENST00000512690 SP7Q8TDD2 431 aaPredicted RBP10.84□□□□□ -0.67
RPS3A-210ENST00000512690 EIF4G1Q04637 1599 aaKnown RBP10.83□□□□□ -0.68
RPS3A-210ENST00000512690 CC2D2AQ9P2K1 1620 aa10.8□□□□□ -0.68
RPS3A-210ENST00000512690 CECR2Q9BXF3 1484 aa10.79□□□□□ -0.68
RPS3A-210ENST00000512690 HAX1O00165 279 aa10.77□□□□□ -0.69
RPS3A-210ENST00000512690 PRR29P0C7W0 189 aa10.75□□□□□ -0.69
RPS3A-210ENST00000512690 CHADLQ6NUI6 762 aa10.75□□□□□ -0.69
RPS3A-210ENST00000512690 PRKAR2AP13861 404 aaKnown RBP10.74□□□□□ -0.69
RPS3A-210ENST00000512690 EVX2Q03828 476 aa10.74□□□□□ -0.69
RPS3A-210ENST00000512690 NCAPD3P42695 1498 aa10.62□□□□□ -0.71
RPS3A-210ENST00000512690 FKBP8Q14318 412 aa10.62□□□□□ -0.71
RPS3A-210ENST00000512690 STAG3Q9UJ98 1225 aa10.59□□□□□ -0.71
RPS3A-210ENST00000512690 ATAD2BQ9ULI0 1458 aa10.56□□□□□ -0.72
RPS3A-210ENST00000512690 C19orf67A6NJJ6 358 aa10.54□□□□□ -0.72
RPS3A-210ENST00000512690 PROM2Q8N271 834 aa10.54□□□□□ -0.72
RPS3A-210ENST00000512690 CREBZFQ9NS37 354 aa10.54□□□□□ -0.72
RPS3A-210ENST00000512690 BAZ1AQ9NRL2 1556 aaPredicted RBP10.53□□□□□ -0.72
RPS3A-210ENST00000512690 SMARCA2P51531 1590 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms