RNA–Protein interactions for RNA: ENST00000507327.5

RPS3A-205, Transcript of ribosomal protein S3A, humanhuman

TSL 2

Gene RPS3A, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-205ENST00000507327 AEBP2Q6ZN18 517 aaPredicted RBP21.42■■□□□ 1.02
RPS3A-205ENST00000507327 CHIC1Q5VXU3 224 aa20.24■□□□□ 0.83
RPS3A-205ENST00000507327 SENP3Q9H4L4 574 aaPredicted RBP18.37■□□□□ 0.53
RPS3A-205ENST00000507327 PHF23Q9BUL5 403 aaPredicted RBP18.09■□□□□ 0.49
RPS3A-205ENST00000507327 FOXD1Q16676 465 aa17.09■□□□□ 0.33
RPS3A-205ENST00000507327 PLPPR3Q6T4P5 718 aa16.13■□□□□ 0.17
RPS3A-205ENST00000507327 MSH5O43196 834 aa16.12■□□□□ 0.17
RPS3A-205ENST00000507327 PIAS4Q8N2W9 510 aaPredicted RBP15.95■□□□□ 0.14
RPS3A-205ENST00000507327 POTEDQ86YR6 584 aa15.93■□□□□ 0.14
RPS3A-205ENST00000507327 PPP6R1Q9UPN7 881 aa15.85■□□□□ 0.13
RPS3A-205ENST00000507327 ADRA2BP18089 450 aa15.8■□□□□ 0.12
RPS3A-205ENST00000507327 MAPK8IP2Q13387 824 aaPredicted RBP14.55□□□□□ -0.08
RPS3A-205ENST00000507327 SCAF1Q9H7N4 1312 aaKnown RBP14.55□□□□□ -0.08
RPS3A-205ENST00000507327 DMRT2Q9Y5R5 561 aa14.52□□□□□ -0.09
RPS3A-205ENST00000507327 PPP4R3CPQ6ZMV5 832 aa14.1□□□□□ -0.15
RPS3A-205ENST00000507327 DCAF8L1A6NGE4 600 aa13.95□□□□□ -0.18
RPS3A-205ENST00000507327 HOXD11P31277 338 aaPredicted RBP13.93□□□□□ -0.18
RPS3A-205ENST00000507327 CACNB1Q02641 598 aaPredicted RBP13.91□□□□□ -0.18
RPS3A-205ENST00000507327 CNKSR2Q8WXI2 1034 aa13.89□□□□□ -0.19
RPS3A-205ENST00000507327 RNF216Q9NWF9 866 aaPredicted RBP13.81□□□□□ -0.2
RPS3A-205ENST00000507327 RNF39Q9H2S5 420 aa13.7□□□□□ -0.22
RPS3A-205ENST00000507327 NCBP3Q53F19 620 aaKnown RBP13.57□□□□□ -0.24
RPS3A-205ENST00000507327 C1QBPQ07021 282 aaKnown RBP13.53□□□□□ -0.24
RPS3A-205ENST00000507327 DNAJC5BQ9UF47 199 aa13.52□□□□□ -0.25
RPS3A-205ENST00000507327 NPM3O75607 178 aaKnown RBP13.3□□□□□ -0.28
RPS3A-205ENST00000507327 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.3□□□□□ -0.285e-8■■□□□ 14.3
RPS3A-205ENST00000507327 U3KPZ7 1027 aaPredicted RBP12.95□□□□□ -0.34
RPS3A-205ENST00000507327 KCNA4P22459 653 aa12.89□□□□□ -0.35
RPS3A-205ENST00000507327 CAPN15O75808 1086 aa12.84□□□□□ -0.35
RPS3A-205ENST00000507327 SPINK5Q9NQ38 1064 aaPredicted RBP12.81□□□□□ -0.36
RPS3A-205ENST00000507327 DSG3P32926 999 aa12.77□□□□□ -0.37
RPS3A-205ENST00000507327 SLC4A2P04920 1241 aa12.72□□□□□ -0.37
RPS3A-205ENST00000507327 APLP2Q06481 763 aa12.68□□□□□ -0.38
RPS3A-205ENST00000507327 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.62□□□□□ -0.39
RPS3A-205ENST00000507327 HNRNPUL2Q1KMD3 747 aaKnown RBP12.62□□□□□ -0.39
RPS3A-205ENST00000507327 ZNF219Q9P2Y4 722 aaPredicted RBP12.59□□□□□ -0.39
RPS3A-205ENST00000507327 TRHP20396 242 aaPredicted RBP12.58□□□□□ -0.4
RPS3A-205ENST00000507327 SAMD1Q6SPF0 538 aaPredicted RBP12.52□□□□□ -0.41
RPS3A-205ENST00000507327 ABCB7O75027 752 aa12.49□□□□□ -0.41
RPS3A-205ENST00000507327 POTEHQ6S545 545 aa12.48□□□□□ -0.41
RPS3A-205ENST00000507327 MYCNP04198 464 aaPredicted RBP12.33□□□□□ -0.44
RPS3A-205ENST00000507327 RBM42Q9BTD8 480 aaKnown RBP12.24□□□□□ -0.45
RPS3A-205ENST00000507327 POLA2Q14181 598 aa12.21□□□□□ -0.45
RPS3A-205ENST00000507327 SLC4A1APQ9BWU0 796 aaKnown RBP12.18□□□□□ -0.46
RPS3A-205ENST00000507327 FOXD4L1Q9NU39 408 aa12.12□□□□□ -0.47
RPS3A-205ENST00000507327 ZBTB12Q9Y330 459 aaPredicted RBP12.01□□□□□ -0.49
RPS3A-205ENST00000507327 CHRDL2Q6WN34 429 aa12□□□□□ -0.49
RPS3A-205ENST00000507327 ATF5Q9Y2D1 282 aaPredicted RBP12□□□□□ -0.49
RPS3A-205ENST00000507327 AKT1S1Q96B36 256 aa11.92□□□□□ -0.5
RPS3A-205ENST00000507327 ZBTB22O15209 634 aa11.82□□□□□ -0.52
RPS3A-205ENST00000507327 ATXN8OSP0DMR3 200 aa11.8□□□□□ -0.52
RPS3A-205ENST00000507327 OSCARQ8IYS5 282 aa11.8□□□□□ -0.52
RPS3A-205ENST00000507327 REM2Q8IYK8 340 aaPredicted RBP11.79□□□□□ -0.52
RPS3A-205ENST00000507327 PIP4P2Q8N4L2 257 aa11.68□□□□□ -0.54
RPS3A-205ENST00000507327 PITPNM1O00562 1244 aa11.64□□□□□ -0.55
RPS3A-205ENST00000507327 FBLN2P98095 1184 aa11.64□□□□□ -0.55
RPS3A-205ENST00000507327 SP7Q8TDD2 431 aaPredicted RBP11.62□□□□□ -0.55
RPS3A-205ENST00000507327 SPDYE2BA6NHP3 402 aa11.59□□□□□ -0.55
RPS3A-205ENST00000507327 SPDYE6P0CI01 402 aa11.59□□□□□ -0.55
RPS3A-205ENST00000507327 FXR2P51116 673 aaKnown RBP eCLIP11.59□□□□□ -0.55
RPS3A-205ENST00000507327 SPDYE2Q495Y8 402 aa11.59□□□□□ -0.55
RPS3A-205ENST00000507327 HAX1O00165 279 aa11.53□□□□□ -0.56
RPS3A-205ENST00000507327 MKRN4PQ13434 485 aaPredicted RBP11.45□□□□□ -0.58
RPS3A-205ENST00000507327 SPDYE1Q8NFV5 336 aaPredicted RBP11.44□□□□□ -0.58
RPS3A-205ENST00000507327 ZNF692Q9BU19 519 aaPredicted RBP11.43□□□□□ -0.58
RPS3A-205ENST00000507327 CLEC11AQ9Y240 323 aa11.4□□□□□ -0.58
RPS3A-205ENST00000507327 SSUH2Q9Y2M2 353 aa11.39□□□□□ -0.59
RPS3A-205ENST00000507327 PRKAR2AP13861 404 aaKnown RBP11.36□□□□□ -0.59
RPS3A-205ENST00000507327 EVX2Q03828 476 aa11.31□□□□□ -0.6
RPS3A-205ENST00000507327 PABPN1Q86U42 306 aaKnown RBP eCLIP11.24□□□□□ -0.61
RPS3A-205ENST00000507327 C19orf67A6NJJ6 358 aa11.22□□□□□ -0.61
RPS3A-205ENST00000507327 PRR29P0C7W0 189 aa11.22□□□□□ -0.61
RPS3A-205ENST00000507327 CSRNP3Q8WYN3 585 aa11.17□□□□□ -0.62
RPS3A-205ENST00000507327 CHADLQ6NUI6 762 aa11.16□□□□□ -0.62
RPS3A-205ENST00000507327 GABBR2O75899 941 aa11.09□□□□□ -0.63
RPS3A-205ENST00000507327 FARP1Q9Y4F1 1045 aaPredicted RBP11.02□□□□□ -0.65
RPS3A-205ENST00000507327 CD44P16070 742 aaKnown RBP10.99□□□□□ -0.65
RPS3A-205ENST00000507327 CLCN6P51797 869 aa10.95□□□□□ -0.66
RPS3A-205ENST00000507327 EHMT2Q96KQ7 1210 aa10.95□□□□□ -0.66
RPS3A-205ENST00000507327 STAG3Q9UJ98 1225 aa10.95□□□□□ -0.66
RPS3A-205ENST00000507327 LHX8Q68G74 356 aa10.91□□□□□ -0.66
RPS3A-205ENST00000507327 SPDYE4A6NLX3 237 aa10.89□□□□□ -0.67
RPS3A-205ENST00000507327 CREBZFQ9NS37 354 aa10.86□□□□□ -0.67
RPS3A-205ENST00000507327 POTEIP0CG38 1075 aa10.82□□□□□ -0.68
RPS3A-205ENST00000507327 ZRANB1Q9UGI0 708 aa10.82□□□□□ -0.68
RPS3A-205ENST00000507327 ZNF579Q8NAF0 562 aaKnown RBP10.81□□□□□ -0.68
RPS3A-205ENST00000507327 DCBLD2Q96PD2 775 aa10.79□□□□□ -0.68
RPS3A-205ENST00000507327 PAK3O75914 559 aaPredicted RBP10.74□□□□□ -0.69
RPS3A-205ENST00000507327 NPM1P06748 294 aaKnown RBP eCLIP10.72□□□□□ -0.69
RPS3A-205ENST00000507327 GALR2O43603 387 aaPredicted RBP10.66□□□□□ -0.7
RPS3A-205ENST00000507327 MNX1P50219 401 aaPredicted RBP10.64□□□□□ -0.71
RPS3A-205ENST00000507327 PHF12Q96QT6 1004 aa10.62□□□□□ -0.71
RPS3A-205ENST00000507327 PROM2Q8N271 834 aa10.57□□□□□ -0.72
RPS3A-205ENST00000507327 PLEKHG5O94827 1062 aa10.47□□□□□ -0.73
RPS3A-205ENST00000507327 OTUD5Q96G74 571 aa10.47□□□□□ -0.73
RPS3A-205ENST00000507327 MS4A3Q96HJ5 214 aa10.47□□□□□ -0.73
RPS3A-205ENST00000507327 TSPYL2Q9H2G4 693 aaPredicted RBP10.47□□□□□ -0.73
RPS3A-205ENST00000507327 ASTLQ6HA08 431 aaPredicted RBP10.46□□□□□ -0.73
RPS3A-205ENST00000507327 PELP1Q8IZL8 1130 aaKnown RBP10.46□□□□□ -0.73
RPS3A-205ENST00000507327 POTEB2H3BUK9 544 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms