RNA–Protein interactions for RNA: ENST00000515818.5

RPS3A-214, Transcript of ribosomal protein S3A, humanhuman

TSL 5

Gene RPS3A, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-214ENST00000515818 AEBP2Q6ZN18 517 aaPredicted RBP30.03■■■□□ 2.4
RPS3A-214ENST00000515818 CHIC1Q5VXU3 224 aa29.02■■■□□ 2.24
RPS3A-214ENST00000515818 PHF23Q9BUL5 403 aaPredicted RBP25.55■■□□□ 1.68
RPS3A-214ENST00000515818 SENP3Q9H4L4 574 aaPredicted RBP25.42■■□□□ 1.66
RPS3A-214ENST00000515818 FOXD1Q16676 465 aa23.69■■□□□ 1.38
RPS3A-214ENST00000515818 PLPPR3Q6T4P5 718 aa23.41■■□□□ 1.34
RPS3A-214ENST00000515818 PPP6R1Q9UPN7 881 aa22.63■■□□□ 1.21
RPS3A-214ENST00000515818 ADRA2BP18089 450 aa22.56■■□□□ 1.2
RPS3A-214ENST00000515818 PIAS4Q8N2W9 510 aaPredicted RBP22.22■■□□□ 1.15
RPS3A-214ENST00000515818 MSH5O43196 834 aa21.87■■□□□ 1.09
RPS3A-214ENST00000515818 PPP4R3CPQ6ZMV5 832 aa20.62■□□□□ 0.89
RPS3A-214ENST00000515818 MAPK8IP2Q13387 824 aaPredicted RBP20.57■□□□□ 0.88
RPS3A-214ENST00000515818 SCAF1Q9H7N4 1312 aaKnown RBP20.53■□□□□ 0.88
RPS3A-214ENST00000515818 POTEDQ86YR6 584 aa20.42■□□□□ 0.86
RPS3A-214ENST00000515818 DMRT2Q9Y5R5 561 aa20.28■□□□□ 0.84
RPS3A-214ENST00000515818 CNKSR2Q8WXI2 1034 aa20.08■□□□□ 0.81
RPS3A-214ENST00000515818 NCBP3Q53F19 620 aaKnown RBP19.94■□□□□ 0.78
RPS3A-214ENST00000515818 KCNA4P22459 653 aa19.89■□□□□ 0.77
RPS3A-214ENST00000515818 HOXD11P31277 338 aaPredicted RBP19.78■□□□□ 0.76
RPS3A-214ENST00000515818 RNF216Q9NWF9 866 aaPredicted RBP19.76■□□□□ 0.75
RPS3A-214ENST00000515818 NPM3O75607 178 aaKnown RBP19.73■□□□□ 0.75
RPS3A-214ENST00000515818 DCAF8L1A6NGE4 600 aa19.36■□□□□ 0.69
RPS3A-214ENST00000515818 DNAJC5BQ9UF47 199 aa19.2■□□□□ 0.66
RPS3A-214ENST00000515818 SLC4A1APQ9BWU0 796 aaKnown RBP18.84■□□□□ 0.61
RPS3A-214ENST00000515818 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.79■□□□□ 0.65e-8■■□□□ 14.3
RPS3A-214ENST00000515818 RNF39Q9H2S5 420 aa18.77■□□□□ 0.6
RPS3A-214ENST00000515818 SLC4A2P04920 1241 aa18.73■□□□□ 0.59
RPS3A-214ENST00000515818 U3KPZ7 1027 aaPredicted RBP18.52■□□□□ 0.56
RPS3A-214ENST00000515818 C1QBPQ07021 282 aaKnown RBP18.48■□□□□ 0.55
RPS3A-214ENST00000515818 CACNB1Q02641 598 aaPredicted RBP18.42■□□□□ 0.54
RPS3A-214ENST00000515818 ZBTB22O15209 634 aa18.34■□□□□ 0.53
RPS3A-214ENST00000515818 FOXD4L1Q9NU39 408 aa18.33■□□□□ 0.52
RPS3A-214ENST00000515818 MYCNP04198 464 aaPredicted RBP18.19■□□□□ 0.5
RPS3A-214ENST00000515818 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.09■□□□□ 0.49
RPS3A-214ENST00000515818 HNRNPUL2Q1KMD3 747 aaKnown RBP18.09■□□□□ 0.49
RPS3A-214ENST00000515818 SPINK5Q9NQ38 1064 aaPredicted RBP18.09■□□□□ 0.49
RPS3A-214ENST00000515818 SAMD1Q6SPF0 538 aaPredicted RBP18.05■□□□□ 0.48
RPS3A-214ENST00000515818 EHMT2Q96KQ7 1210 aa18.03■□□□□ 0.48
RPS3A-214ENST00000515818 CSRNP3Q8WYN3 585 aa17.98■□□□□ 0.47
RPS3A-214ENST00000515818 CAPN15O75808 1086 aa17.96■□□□□ 0.47
RPS3A-214ENST00000515818 APLP2Q06481 763 aa17.94■□□□□ 0.46
RPS3A-214ENST00000515818 TRHP20396 242 aaPredicted RBP17.82■□□□□ 0.44
RPS3A-214ENST00000515818 ATF5Q9Y2D1 282 aaPredicted RBP17.81■□□□□ 0.44
RPS3A-214ENST00000515818 ZNF219Q9P2Y4 722 aaPredicted RBP17.79■□□□□ 0.44
RPS3A-214ENST00000515818 DSG3P32926 999 aa17.77■□□□□ 0.44
RPS3A-214ENST00000515818 ATXN8OSP0DMR3 200 aa17.7■□□□□ 0.42
RPS3A-214ENST00000515818 ABCB7O75027 752 aa17.64■□□□□ 0.41
RPS3A-214ENST00000515818 POLA2Q14181 598 aa17.49■□□□□ 0.39
RPS3A-214ENST00000515818 ZBTB12Q9Y330 459 aaPredicted RBP17.12■□□□□ 0.33
RPS3A-214ENST00000515818 MKRN4PQ13434 485 aaPredicted RBP17.02■□□□□ 0.32
RPS3A-214ENST00000515818 FBLN2P98095 1184 aa16.96■□□□□ 0.31
RPS3A-214ENST00000515818 OSCARQ8IYS5 282 aa16.93■□□□□ 0.3
RPS3A-214ENST00000515818 RBM42Q9BTD8 480 aaKnown RBP16.86■□□□□ 0.29
RPS3A-214ENST00000515818 SPDYE2BA6NHP3 402 aa16.68■□□□□ 0.26
RPS3A-214ENST00000515818 SPDYE6P0CI01 402 aa16.68■□□□□ 0.26
RPS3A-214ENST00000515818 SPDYE2Q495Y8 402 aa16.68■□□□□ 0.26
RPS3A-214ENST00000515818 AKT1S1Q96B36 256 aa16.64■□□□□ 0.25
RPS3A-214ENST00000515818 ZNF692Q9BU19 519 aaPredicted RBP16.57■□□□□ 0.24
RPS3A-214ENST00000515818 SSUH2Q9Y2M2 353 aa16.57■□□□□ 0.24
RPS3A-214ENST00000515818 REM2Q8IYK8 340 aaPredicted RBP16.5■□□□□ 0.23
RPS3A-214ENST00000515818 SPDYE4A6NLX3 237 aa16.45■□□□□ 0.22
RPS3A-214ENST00000515818 PABPN1Q86U42 306 aaKnown RBP eCLIP16.37■□□□□ 0.21
RPS3A-214ENST00000515818 PITPNM1O00562 1244 aa16.33■□□□□ 0.2
RPS3A-214ENST00000515818 CHRDL2Q6WN34 429 aa16.32■□□□□ 0.2
RPS3A-214ENST00000515818 SPDYE1Q8NFV5 336 aaPredicted RBP16.24■□□□□ 0.19
RPS3A-214ENST00000515818 FKBP8Q14318 412 aa16.23■□□□□ 0.19
RPS3A-214ENST00000515818 PROM2Q8N271 834 aa16.2■□□□□ 0.18
RPS3A-214ENST00000515818 CLEC11AQ9Y240 323 aa16.18■□□□□ 0.18
RPS3A-214ENST00000515818 POTEHQ6S545 545 aa16.1■□□□□ 0.17
RPS3A-214ENST00000515818 FXR2P51116 673 aaKnown RBP eCLIP16.08■□□□□ 0.16
RPS3A-214ENST00000515818 PIP4P2Q8N4L2 257 aa16.08■□□□□ 0.16
RPS3A-214ENST00000515818 PRR29P0C7W0 189 aa15.99■□□□□ 0.15
RPS3A-214ENST00000515818 STAG3Q9UJ98 1225 aa15.99■□□□□ 0.15
RPS3A-214ENST00000515818 PRKAR2AP13861 404 aaKnown RBP15.89■□□□□ 0.13
RPS3A-214ENST00000515818 CHADLQ6NUI6 762 aa15.86■□□□□ 0.13
RPS3A-214ENST00000515818 CREBZFQ9NS37 354 aa15.8■□□□□ 0.12
RPS3A-214ENST00000515818 FARP1Q9Y4F1 1045 aaPredicted RBP15.67■□□□□ 0.1
RPS3A-214ENST00000515818 FBXO3Q9UK99 471 aa15.66■□□□□ 0.1
RPS3A-214ENST00000515818 MNX1P50219 401 aaPredicted RBP15.63■□□□□ 0.09
RPS3A-214ENST00000515818 MIER1Q8N108 512 aa15.6■□□□□ 0.09
RPS3A-214ENST00000515818 HAX1O00165 279 aa15.58■□□□□ 0.08
RPS3A-214ENST00000515818 C19orf67A6NJJ6 358 aa15.54■□□□□ 0.08
RPS3A-214ENST00000515818 EVX2Q03828 476 aa15.53■□□□□ 0.08
RPS3A-214ENST00000515818 PLCD3Q8N3E9 789 aa15.53■□□□□ 0.08
RPS3A-214ENST00000515818 VASPP50552 380 aaPredicted RBP15.51■□□□□ 0.07
RPS3A-214ENST00000515818 PLEKHG5O94827 1062 aa15.46■□□□□ 0.07
RPS3A-214ENST00000515818 NPM1P06748 294 aaKnown RBP eCLIP15.44■□□□□ 0.06
RPS3A-214ENST00000515818 CD44P16070 742 aaKnown RBP15.41■□□□□ 0.06
RPS3A-214ENST00000515818 SP7Q8TDD2 431 aaPredicted RBP15.36■□□□□ 0.05
RPS3A-214ENST00000515818 ZBTB47Q9UFB7 747 aaPredicted RBP15.34■□□□□ 0.05
RPS3A-214ENST00000515818 IFNLR1Q8IU57 520 aaPredicted RBP15.32■□□□□ 0.04
RPS3A-214ENST00000515818 NUBP1P53384 320 aa15.3■□□□□ 0.04
RPS3A-214ENST00000515818 RASEFQ8IZ41 740 aa15.29■□□□□ 0.04
RPS3A-214ENST00000515818 ZRANB1Q9UGI0 708 aa15.29■□□□□ 0.04
RPS3A-214ENST00000515818 KLHL34Q8N239 644 aa15.26■□□□□ 0.03
RPS3A-214ENST00000515818 PAK3O75914 559 aaPredicted RBP15.22■□□□□ 0.03
RPS3A-214ENST00000515818 ZNF579Q8NAF0 562 aaKnown RBP15.22■□□□□ 0.03
RPS3A-214ENST00000515818 TSPYL2Q9H2G4 693 aaPredicted RBP15.22■□□□□ 0.03
RPS3A-214ENST00000515818 GABBR2O75899 941 aa15.16■□□□□ 0.02
RPS3A-214ENST00000515818 PHF12Q96QT6 1004 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms