RNA–Protein interactions for RNA: ENST00000512797.5

RPS3A-211, Transcript of ribosomal protein S3A, humanhuman

TSL 2

Gene RPS3A, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-211ENST00000512797 AEBP2Q6ZN18 517 aaPredicted RBP29.11■■■□□ 2.25
RPS3A-211ENST00000512797 CHIC1Q5VXU3 224 aa27.92■■■□□ 2.06
RPS3A-211ENST00000512797 SENP3Q9H4L4 574 aaPredicted RBP24.67■■□□□ 1.54
RPS3A-211ENST00000512797 PHF23Q9BUL5 403 aaPredicted RBP24.57■■□□□ 1.52
RPS3A-211ENST00000512797 FOXD1Q16676 465 aa23.05■■□□□ 1.28
RPS3A-211ENST00000512797 PLPPR3Q6T4P5 718 aa22.43■■□□□ 1.18
RPS3A-211ENST00000512797 PPP6R1Q9UPN7 881 aa21.86■■□□□ 1.09
RPS3A-211ENST00000512797 ADRA2BP18089 450 aa21.79■■□□□ 1.08
RPS3A-211ENST00000512797 PIAS4Q8N2W9 510 aaPredicted RBP21.56■■□□□ 1.04
RPS3A-211ENST00000512797 MSH5O43196 834 aa21.34■■□□□ 1.01
RPS3A-211ENST00000512797 POTEDQ86YR6 584 aa20.33■□□□□ 0.85
RPS3A-211ENST00000512797 MAPK8IP2Q13387 824 aaPredicted RBP19.95■□□□□ 0.78
RPS3A-211ENST00000512797 SCAF1Q9H7N4 1312 aaKnown RBP19.84■□□□□ 0.77
RPS3A-211ENST00000512797 PPP4R3CPQ6ZMV5 832 aa19.76■□□□□ 0.75
RPS3A-211ENST00000512797 DMRT2Q9Y5R5 561 aa19.64■□□□□ 0.73
RPS3A-211ENST00000512797 CNKSR2Q8WXI2 1034 aa19.27■□□□□ 0.68
RPS3A-211ENST00000512797 HOXD11P31277 338 aaPredicted RBP19.07■□□□□ 0.64
RPS3A-211ENST00000512797 NCBP3Q53F19 620 aaKnown RBP19.04■□□□□ 0.64
RPS3A-211ENST00000512797 RNF216Q9NWF9 866 aaPredicted RBP19■□□□□ 0.63
RPS3A-211ENST00000512797 DCAF8L1A6NGE4 600 aa18.85■□□□□ 0.61
RPS3A-211ENST00000512797 NPM3O75607 178 aaKnown RBP18.82■□□□□ 0.6
RPS3A-211ENST00000512797 KCNA4P22459 653 aa18.78■□□□□ 0.6
RPS3A-211ENST00000512797 RNF39Q9H2S5 420 aa18.29■□□□□ 0.52
RPS3A-211ENST00000512797 DNAJC5BQ9UF47 199 aa18.28■□□□□ 0.52
RPS3A-211ENST00000512797 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.18■□□□□ 0.55e-8■■□□□ 14.3
RPS3A-211ENST00000512797 CACNB1Q02641 598 aaPredicted RBP18.16■□□□□ 0.5
RPS3A-211ENST00000512797 C1QBPQ07021 282 aaKnown RBP18.01■□□□□ 0.47
RPS3A-211ENST00000512797 SLC4A2P04920 1241 aa17.92■□□□□ 0.46
RPS3A-211ENST00000512797 U3KPZ7 1027 aaPredicted RBP17.84■□□□□ 0.45
RPS3A-211ENST00000512797 SLC4A1APQ9BWU0 796 aaKnown RBP17.77■□□□□ 0.44
RPS3A-211ENST00000512797 SPINK5Q9NQ38 1064 aaPredicted RBP17.51■□□□□ 0.39
RPS3A-211ENST00000512797 CAPN15O75808 1086 aa17.43■□□□□ 0.38
RPS3A-211ENST00000512797 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.37■□□□□ 0.37
RPS3A-211ENST00000512797 HNRNPUL2Q1KMD3 747 aaKnown RBP17.37■□□□□ 0.37
RPS3A-211ENST00000512797 FOXD4L1Q9NU39 408 aa17.36■□□□□ 0.37
RPS3A-211ENST00000512797 MYCNP04198 464 aaPredicted RBP17.34■□□□□ 0.37
RPS3A-211ENST00000512797 SAMD1Q6SPF0 538 aaPredicted RBP17.31■□□□□ 0.36
RPS3A-211ENST00000512797 ZBTB22O15209 634 aa17.3■□□□□ 0.36
RPS3A-211ENST00000512797 APLP2Q06481 763 aa17.27■□□□□ 0.36
RPS3A-211ENST00000512797 TRHP20396 242 aaPredicted RBP17.25■□□□□ 0.35
RPS3A-211ENST00000512797 DSG3P32926 999 aa17.25■□□□□ 0.35
RPS3A-211ENST00000512797 ZNF219Q9P2Y4 722 aaPredicted RBP17.15■□□□□ 0.34
RPS3A-211ENST00000512797 ABCB7O75027 752 aa17.08■□□□□ 0.32
RPS3A-211ENST00000512797 ATF5Q9Y2D1 282 aaPredicted RBP17.03■□□□□ 0.32
RPS3A-211ENST00000512797 POLA2Q14181 598 aa16.87■□□□□ 0.29
RPS3A-211ENST00000512797 CSRNP3Q8WYN3 585 aa16.81■□□□□ 0.28
RPS3A-211ENST00000512797 ATXN8OSP0DMR3 200 aa16.78■□□□□ 0.28
RPS3A-211ENST00000512797 EHMT2Q96KQ7 1210 aa16.76■□□□□ 0.27
RPS3A-211ENST00000512797 ZBTB12Q9Y330 459 aaPredicted RBP16.45■□□□□ 0.22
RPS3A-211ENST00000512797 RBM42Q9BTD8 480 aaKnown RBP16.37■□□□□ 0.21
RPS3A-211ENST00000512797 OSCARQ8IYS5 282 aa16.28■□□□□ 0.2
RPS3A-211ENST00000512797 MKRN4PQ13434 485 aaPredicted RBP16.24■□□□□ 0.19
RPS3A-211ENST00000512797 FBLN2P98095 1184 aa16.23■□□□□ 0.19
RPS3A-211ENST00000512797 AKT1S1Q96B36 256 aa16.11■□□□□ 0.17
RPS3A-211ENST00000512797 SPDYE2BA6NHP3 402 aa16.01■□□□□ 0.15
RPS3A-211ENST00000512797 SPDYE6P0CI01 402 aa16.01■□□□□ 0.15
RPS3A-211ENST00000512797 SPDYE2Q495Y8 402 aa16.01■□□□□ 0.15
RPS3A-211ENST00000512797 REM2Q8IYK8 340 aaPredicted RBP16■□□□□ 0.15
RPS3A-211ENST00000512797 POTEHQ6S545 545 aa15.98■□□□□ 0.15
RPS3A-211ENST00000512797 CHRDL2Q6WN34 429 aa15.94■□□□□ 0.14
RPS3A-211ENST00000512797 ZNF692Q9BU19 519 aaPredicted RBP15.92■□□□□ 0.14
RPS3A-211ENST00000512797 SSUH2Q9Y2M2 353 aa15.85■□□□□ 0.13
RPS3A-211ENST00000512797 PITPNM1O00562 1244 aa15.82■□□□□ 0.12
RPS3A-211ENST00000512797 PABPN1Q86U42 306 aaKnown RBP eCLIP15.7■□□□□ 0.1
RPS3A-211ENST00000512797 PIP4P2Q8N4L2 257 aa15.66■□□□□ 0.1
RPS3A-211ENST00000512797 CLEC11AQ9Y240 323 aa15.65■□□□□ 0.1
RPS3A-211ENST00000512797 SPDYE1Q8NFV5 336 aaPredicted RBP15.64■□□□□ 0.09
RPS3A-211ENST00000512797 SPDYE4A6NLX3 237 aa15.61■□□□□ 0.09
RPS3A-211ENST00000512797 FXR2P51116 673 aaKnown RBP eCLIP15.61■□□□□ 0.09
RPS3A-211ENST00000512797 PRR29P0C7W0 189 aa15.43■□□□□ 0.06
RPS3A-211ENST00000512797 PRKAR2AP13861 404 aaKnown RBP15.41■□□□□ 0.06
RPS3A-211ENST00000512797 CHADLQ6NUI6 762 aa15.35■□□□□ 0.05
RPS3A-211ENST00000512797 HAX1O00165 279 aa15.29■□□□□ 0.04
RPS3A-211ENST00000512797 STAG3Q9UJ98 1225 aa15.29■□□□□ 0.04
RPS3A-211ENST00000512797 PROM2Q8N271 834 aa15.27■□□□□ 0.04
RPS3A-211ENST00000512797 EVX2Q03828 476 aa15.19■□□□□ 0.02
RPS3A-211ENST00000512797 FKBP8Q14318 412 aa15.19■□□□□ 0.02
RPS3A-211ENST00000512797 CREBZFQ9NS37 354 aa15.15■□□□□ 0.02
RPS3A-211ENST00000512797 SP7Q8TDD2 431 aaPredicted RBP15.12■□□□□ 0.01
RPS3A-211ENST00000512797 FARP1Q9Y4F1 1045 aaPredicted RBP15.12■□□□□ 0.01
RPS3A-211ENST00000512797 C19orf67A6NJJ6 358 aa15.1■□□□□ 0.01
RPS3A-211ENST00000512797 MNX1P50219 401 aaPredicted RBP14.95□□□□□ -0.02
RPS3A-211ENST00000512797 CD44P16070 742 aaKnown RBP14.93□□□□□ -0.02
RPS3A-211ENST00000512797 MIER1Q8N108 512 aa14.87□□□□□ -0.03
RPS3A-211ENST00000512797 NPM1P06748 294 aaKnown RBP eCLIP14.83□□□□□ -0.04
RPS3A-211ENST00000512797 GABBR2O75899 941 aa14.82□□□□□ -0.04
RPS3A-211ENST00000512797 ZRANB1Q9UGI0 708 aa14.79□□□□□ -0.04
RPS3A-211ENST00000512797 PLCD3Q8N3E9 789 aa14.77□□□□□ -0.05
RPS3A-211ENST00000512797 PLEKHG5O94827 1062 aa14.74□□□□□ -0.05
RPS3A-211ENST00000512797 FBXO3Q9UK99 471 aa14.72□□□□□ -0.05
RPS3A-211ENST00000512797 ZNF579Q8NAF0 562 aaKnown RBP14.7□□□□□ -0.06
RPS3A-211ENST00000512797 PAK3O75914 559 aaPredicted RBP14.67□□□□□ -0.06
RPS3A-211ENST00000512797 PHF12Q96QT6 1004 aa14.63□□□□□ -0.07
RPS3A-211ENST00000512797 TSPYL2Q9H2G4 693 aaPredicted RBP14.63□□□□□ -0.07
RPS3A-211ENST00000512797 CLCN6P51797 869 aa14.59□□□□□ -0.07
RPS3A-211ENST00000512797 RASEFQ8IZ41 740 aa14.59□□□□□ -0.07
RPS3A-211ENST00000512797 ZBTB47Q9UFB7 747 aaPredicted RBP14.57□□□□□ -0.08
RPS3A-211ENST00000512797 VASPP50552 380 aaPredicted RBP14.56□□□□□ -0.08
RPS3A-211ENST00000512797 NUBP1P53384 320 aa14.55□□□□□ -0.08
RPS3A-211ENST00000512797 GALR2O43603 387 aaPredicted RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms