RNA–Protein interactions for RNA: ENST00000564647.5

RPL4-207, Transcript of ribosomal protein L4, humanhuman

TSL 2

Gene RPL4, Length 1,110 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-207ENST00000564647 AEBP2Q6ZN18 517 aaPredicted RBP29.62■■■□□ 2.33
RPL4-207ENST00000564647 CHIC1Q5VXU3 224 aa28.58■■■□□ 2.17
RPL4-207ENST00000564647 SENP3Q9H4L4 574 aaPredicted RBP25.37■■□□□ 1.65
RPL4-207ENST00000564647 PHF23Q9BUL5 403 aaPredicted RBP24.99■■□□□ 1.59
RPL4-207ENST00000564647 FOXD1Q16676 465 aa23.49■■□□□ 1.35
RPL4-207ENST00000564647 PLPPR3Q6T4P5 718 aa23.07■■□□□ 1.28
RPL4-207ENST00000564647 ADRA2BP18089 450 aa22.18■■□□□ 1.14
RPL4-207ENST00000564647 PPP6R1Q9UPN7 881 aa22.17■■□□□ 1.14
RPL4-207ENST00000564647 PIAS4Q8N2W9 510 aaPredicted RBP22.14■■□□□ 1.13
RPL4-207ENST00000564647 MSH5O43196 834 aa21.97■■□□□ 1.11
RPL4-207ENST00000564647 POTEDQ86YR6 584 aa20.71■□□□□ 0.91
RPL4-207ENST00000564647 SCAF1Q9H7N4 1312 aaKnown RBP20.44■□□□□ 0.86
RPL4-207ENST00000564647 MAPK8IP2Q13387 824 aaPredicted RBP20.22■□□□□ 0.83
RPL4-207ENST00000564647 PPP4R3CPQ6ZMV5 832 aa20.21■□□□□ 0.83
RPL4-207ENST00000564647 DMRT2Q9Y5R5 561 aa20.12■□□□□ 0.81
RPL4-207ENST00000564647 KCNA4P22459 653 aa19.83■□□□□ 0.77
RPL4-207ENST00000564647 CNKSR2Q8WXI2 1034 aa19.79■□□□□ 0.76
RPL4-207ENST00000564647 NCBP3Q53F19 620 aaKnown RBP19.65■□□□□ 0.74
RPL4-207ENST00000564647 HOXD11P31277 338 aaPredicted RBP19.51■□□□□ 0.71
RPL4-207ENST00000564647 RNF216Q9NWF9 866 aaPredicted RBP19.5■□□□□ 0.71
RPL4-207ENST00000564647 DCAF8L1A6NGE4 600 aa19.36■□□□□ 0.69
RPL4-207ENST00000564647 NPM3O75607 178 aaKnown RBP19.26■□□□□ 0.67
RPL4-207ENST00000564647 EHMT2Q96KQ7 1210 aa18.96■□□□□ 0.63
RPL4-207ENST00000564647 SLC4A1APQ9BWU0 796 aaKnown RBP18.94■□□□□ 0.62
RPL4-207ENST00000564647 DNAJC5BQ9UF47 199 aa18.8■□□□□ 0.6
RPL4-207ENST00000564647 RNF39Q9H2S5 420 aa18.7■□□□□ 0.58
RPL4-207ENST00000564647 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.67■□□□□ 0.582e-32■□□□□ 11.3
RPL4-207ENST00000564647 CACNB1Q02641 598 aaPredicted RBP18.6■□□□□ 0.57
RPL4-207ENST00000564647 CSRNP3Q8WYN3 585 aa18.52■□□□□ 0.56
RPL4-207ENST00000564647 C1QBPQ07021 282 aaKnown RBP18.5■□□□□ 0.55
RPL4-207ENST00000564647 ZBTB22O15209 634 aa18.28■□□□□ 0.52
RPL4-207ENST00000564647 U3KPZ7 1027 aaPredicted RBP18.25■□□□□ 0.51
RPL4-207ENST00000564647 SLC4A2P04920 1241 aa18.24■□□□□ 0.51
RPL4-207ENST00000564647 FOXD4L1Q9NU39 408 aa18.07■□□□□ 0.48
RPL4-207ENST00000564647 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18■□□□□ 0.47
RPL4-207ENST00000564647 HNRNPUL2Q1KMD3 747 aaKnown RBP18■□□□□ 0.47
RPL4-207ENST00000564647 APLP2Q06481 763 aa17.97■□□□□ 0.47
RPL4-207ENST00000564647 CAPN15O75808 1086 aa17.9■□□□□ 0.46
RPL4-207ENST00000564647 MYCNP04198 464 aaPredicted RBP17.89■□□□□ 0.45
RPL4-207ENST00000564647 SAMD1Q6SPF0 538 aaPredicted RBP17.88■□□□□ 0.45
RPL4-207ENST00000564647 SPINK5Q9NQ38 1064 aaPredicted RBP17.85■□□□□ 0.45
RPL4-207ENST00000564647 ZNF219Q9P2Y4 722 aaPredicted RBP17.73■□□□□ 0.43
RPL4-207ENST00000564647 TRHP20396 242 aaPredicted RBP17.68■□□□□ 0.42
RPL4-207ENST00000564647 DSG3P32926 999 aa17.62■□□□□ 0.41
RPL4-207ENST00000564647 ABCB7O75027 752 aa17.49■□□□□ 0.39
RPL4-207ENST00000564647 ATXN8OSP0DMR3 200 aa17.36■□□□□ 0.37
RPL4-207ENST00000564647 ATF5Q9Y2D1 282 aaPredicted RBP17.3■□□□□ 0.36
RPL4-207ENST00000564647 POLA2Q14181 598 aa17.24■□□□□ 0.35
RPL4-207ENST00000564647 ZBTB12Q9Y330 459 aaPredicted RBP17.07■□□□□ 0.32
RPL4-207ENST00000564647 RBM42Q9BTD8 480 aaKnown RBP16.95■□□□□ 0.3
RPL4-207ENST00000564647 FBLN2P98095 1184 aa16.79■□□□□ 0.28
RPL4-207ENST00000564647 OSCARQ8IYS5 282 aa16.73■□□□□ 0.27
RPL4-207ENST00000564647 FKBP8Q14318 412 aa16.71■□□□□ 0.27
RPL4-207ENST00000564647 AKT1S1Q96B36 256 aa16.57■□□□□ 0.24
RPL4-207ENST00000564647 MKRN4PQ13434 485 aaPredicted RBP16.54■□□□□ 0.24
RPL4-207ENST00000564647 SPDYE2BA6NHP3 402 aa16.51■□□□□ 0.23
RPL4-207ENST00000564647 SPDYE6P0CI01 402 aa16.51■□□□□ 0.23
RPL4-207ENST00000564647 SPDYE2Q495Y8 402 aa16.51■□□□□ 0.23
RPL4-207ENST00000564647 REM2Q8IYK8 340 aaPredicted RBP16.36■□□□□ 0.21
RPL4-207ENST00000564647 POTEHQ6S545 545 aa16.34■□□□□ 0.21
RPL4-207ENST00000564647 CHRDL2Q6WN34 429 aa16.34■□□□□ 0.21
RPL4-207ENST00000564647 ZNF692Q9BU19 519 aaPredicted RBP16.34■□□□□ 0.21
RPL4-207ENST00000564647 SSUH2Q9Y2M2 353 aa16.28■□□□□ 0.2
RPL4-207ENST00000564647 SPDYE4A6NLX3 237 aa16.24■□□□□ 0.19
RPL4-207ENST00000564647 PITPNM1O00562 1244 aa16.21■□□□□ 0.19
RPL4-207ENST00000564647 SPDYE1Q8NFV5 336 aaPredicted RBP16.14■□□□□ 0.17
RPL4-207ENST00000564647 PABPN1Q86U42 306 aaKnown RBP eCLIP16.1■□□□□ 0.17
RPL4-207ENST00000564647 CLEC11AQ9Y240 323 aa16.08■□□□□ 0.16
RPL4-207ENST00000564647 PROM2Q8N271 834 aa16.01■□□□□ 0.15
RPL4-207ENST00000564647 PIP4P2Q8N4L2 257 aa16.01■□□□□ 0.15
RPL4-207ENST00000564647 RTN4Q9NQC3 1192 aaKnown RBP16.01■□□□□ 0.15
RPL4-207ENST00000564647 FXR2P51116 673 aaKnown RBP eCLIP15.96■□□□□ 0.15
RPL4-207ENST00000564647 AMER1Q5JTC6 1135 aaPredicted RBP15.96■□□□□ 0.15
RPL4-207ENST00000564647 FBXO3Q9UK99 471 aa15.92■□□□□ 0.14
RPL4-207ENST00000564647 PRR29P0C7W0 189 aa15.86■□□□□ 0.13
RPL4-207ENST00000564647 PRKAR2AP13861 404 aaKnown RBP15.81■□□□□ 0.12
RPL4-207ENST00000564647 STAG3Q9UJ98 1225 aa15.81■□□□□ 0.12
RPL4-207ENST00000564647 VASPP50552 380 aaPredicted RBP15.74■□□□□ 0.11
RPL4-207ENST00000564647 CHADLQ6NUI6 762 aa15.68■□□□□ 0.1
RPL4-207ENST00000564647 HAX1O00165 279 aa15.65■□□□□ 0.1
RPL4-207ENST00000564647 IFNLR1Q8IU57 520 aaPredicted RBP15.58■□□□□ 0.08
RPL4-207ENST00000564647 SP7Q8TDD2 431 aaPredicted RBP15.51■□□□□ 0.07
RPL4-207ENST00000564647 CREBZFQ9NS37 354 aa15.49■□□□□ 0.07
RPL4-207ENST00000564647 FARP1Q9Y4F1 1045 aaPredicted RBP15.49■□□□□ 0.07
RPL4-207ENST00000564647 C19orf67A6NJJ6 358 aa15.44■□□□□ 0.06
RPL4-207ENST00000564647 KLHL34Q8N239 644 aa15.37■□□□□ 0.05
RPL4-207ENST00000564647 PLCD3Q8N3E9 789 aa15.37■□□□□ 0.05
RPL4-207ENST00000564647 PLEKHG5O94827 1062 aa15.36■□□□□ 0.05
RPL4-207ENST00000564647 CD44P16070 742 aaKnown RBP15.35■□□□□ 0.05
RPL4-207ENST00000564647 MIER1Q8N108 512 aa15.35■□□□□ 0.05
RPL4-207ENST00000564647 NPM1P06748 294 aaKnown RBP eCLIP15.33■□□□□ 0.04
RPL4-207ENST00000564647 EVX2Q03828 476 aa15.33■□□□□ 0.04
RPL4-207ENST00000564647 SPOCK2Q92563 424 aa15.28■□□□□ 0.04
RPL4-207ENST00000564647 PAK3O75914 559 aaPredicted RBP15.24■□□□□ 0.03
RPL4-207ENST00000564647 MNX1P50219 401 aaPredicted RBP15.23■□□□□ 0.03
RPL4-207ENST00000564647 PKD2Q13563 968 aa15.23■□□□□ 0.03
RPL4-207ENST00000564647 ZRANB1Q9UGI0 708 aa15.18■□□□□ 0.02
RPL4-207ENST00000564647 ZBTB47Q9UFB7 747 aaPredicted RBP15.16■□□□□ 0.02
RPL4-207ENST00000564647 SLC24A1O60721 1099 aa15.15■□□□□ 0.02
RPL4-207ENST00000564647 ZNF579Q8NAF0 562 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms