Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.39■■□□□ 1.33
VPS37AQ8NEZ2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
VPS37AQ8NEZ2 LINC01971-201ENST00000617888 1048 ntBASIC23.38■■□□□ 1.33
VPS37AQ8NEZ2 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.38■■□□□ 1.33
VPS37AQ8NEZ2 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.38■■□□□ 1.33
VPS37AQ8NEZ2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.38■■□□□ 1.33
VPS37AQ8NEZ2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
VPS37AQ8NEZ2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.37■■□□□ 1.33
VPS37AQ8NEZ2 AC092803.2-201ENST00000564287 1899 ntBASIC23.37■■□□□ 1.33
VPS37AQ8NEZ2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.37■■□□□ 1.33
VPS37AQ8NEZ2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.37■■□□□ 1.33
VPS37AQ8NEZ2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
VPS37AQ8NEZ2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
VPS37AQ8NEZ2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
VPS37AQ8NEZ2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
VPS37AQ8NEZ2 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VPS37AQ8NEZ2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
VPS37AQ8NEZ2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VPS37AQ8NEZ2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
VPS37AQ8NEZ2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VPS37AQ8NEZ2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
VPS37AQ8NEZ2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.35■■□□□ 1.33
VPS37AQ8NEZ2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
VPS37AQ8NEZ2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
VPS37AQ8NEZ2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
VPS37AQ8NEZ2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
VPS37AQ8NEZ2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
VPS37AQ8NEZ2 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
VPS37AQ8NEZ2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
VPS37AQ8NEZ2 RPS2P35-201ENST00000443417 897 ntBASIC23.33■■□□□ 1.33
VPS37AQ8NEZ2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
VPS37AQ8NEZ2 DUSP8P4-201ENST00000399538 1761 ntBASIC23.32■■□□□ 1.32
VPS37AQ8NEZ2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
VPS37AQ8NEZ2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
VPS37AQ8NEZ2 AC008813.1-201ENST00000536597 885 ntBASIC23.31■■□□□ 1.32
VPS37AQ8NEZ2 DUX4L13-201ENST00000554103 1267 ntBASIC23.31■■□□□ 1.32
VPS37AQ8NEZ2 DUX4L15-201ENST00000611059 1267 ntBASIC23.31■■□□□ 1.32
VPS37AQ8NEZ2 DUX4L23-201ENST00000615195 1269 ntBASIC23.31■■□□□ 1.32
VPS37AQ8NEZ2 DUX4L24-201ENST00000617576 1269 ntBASIC23.31■■□□□ 1.32
VPS37AQ8NEZ2 DUX4L22-201ENST00000618238 1269 ntBASIC23.31■■□□□ 1.32
VPS37AQ8NEZ2 DUX4L20-201ENST00000619712 1269 ntBASIC23.31■■□□□ 1.32
VPS37AQ8NEZ2 DUX4L21-201ENST00000622058 1269 ntBASIC23.31■■□□□ 1.32
VPS37AQ8NEZ2 DUX4L10-201ENST00000622460 1267 ntBASIC23.31■■□□□ 1.32
VPS37AQ8NEZ2 DUX4L25-201ENST00000624915 1269 ntBASIC23.31■■□□□ 1.32
VPS37AQ8NEZ2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
VPS37AQ8NEZ2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
VPS37AQ8NEZ2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.31■■□□□ 1.32
VPS37AQ8NEZ2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.3■■□□□ 1.32
VPS37AQ8NEZ2 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
VPS37AQ8NEZ2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
VPS37AQ8NEZ2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
VPS37AQ8NEZ2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.3■■□□□ 1.32
VPS37AQ8NEZ2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
VPS37AQ8NEZ2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.29■■□□□ 1.32
VPS37AQ8NEZ2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
VPS37AQ8NEZ2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.29■■□□□ 1.32
VPS37AQ8NEZ2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
VPS37AQ8NEZ2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
VPS37AQ8NEZ2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
VPS37AQ8NEZ2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
VPS37AQ8NEZ2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
VPS37AQ8NEZ2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
VPS37AQ8NEZ2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
VPS37AQ8NEZ2 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
VPS37AQ8NEZ2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.28■■□□□ 1.32
VPS37AQ8NEZ2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
VPS37AQ8NEZ2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
VPS37AQ8NEZ2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
VPS37AQ8NEZ2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
VPS37AQ8NEZ2 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
VPS37AQ8NEZ2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.27■■□□□ 1.32
VPS37AQ8NEZ2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.27■■□□□ 1.32
VPS37AQ8NEZ2 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
VPS37AQ8NEZ2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
VPS37AQ8NEZ2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
VPS37AQ8NEZ2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
VPS37AQ8NEZ2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
VPS37AQ8NEZ2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
VPS37AQ8NEZ2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
VPS37AQ8NEZ2 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
VPS37AQ8NEZ2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.26■■□□□ 1.31
VPS37AQ8NEZ2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.26■■□□□ 1.31
VPS37AQ8NEZ2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
VPS37AQ8NEZ2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
VPS37AQ8NEZ2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.26■■□□□ 1.31
VPS37AQ8NEZ2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
VPS37AQ8NEZ2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.26■■□□□ 1.31
VPS37AQ8NEZ2 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
VPS37AQ8NEZ2 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
VPS37AQ8NEZ2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
VPS37AQ8NEZ2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
VPS37AQ8NEZ2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
VPS37AQ8NEZ2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
VPS37AQ8NEZ2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
VPS37AQ8NEZ2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.24■■□□□ 1.31
VPS37AQ8NEZ2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
VPS37AQ8NEZ2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
VPS37AQ8NEZ2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
VPS37AQ8NEZ2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.24■■□□□ 1.31
VPS37AQ8NEZ2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms