Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.61■□□□□ 0.89
RIPPLY3P57055 MIR4787-201ENST00000607364 84 ntBASIC20.61■□□□□ 0.89
RIPPLY3P57055 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.61■□□□□ 0.89
RIPPLY3P57055 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.61■□□□□ 0.89
RIPPLY3P57055 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RIPPLY3P57055 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RIPPLY3P57055 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
RIPPLY3P57055 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RIPPLY3P57055 UNC93B8-201ENST00000511903 705 ntBASIC20.6■□□□□ 0.89
RIPPLY3P57055 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RIPPLY3P57055 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.6■□□□□ 0.89
RIPPLY3P57055 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RIPPLY3P57055 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.59■□□□□ 0.89
RIPPLY3P57055 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.59■□□□□ 0.89
RIPPLY3P57055 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.59■□□□□ 0.89
RIPPLY3P57055 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
RIPPLY3P57055 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RIPPLY3P57055 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RIPPLY3P57055 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RIPPLY3P57055 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.58■□□□□ 0.89
RIPPLY3P57055 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.58■□□□□ 0.88
RIPPLY3P57055 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RIPPLY3P57055 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RIPPLY3P57055 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC20.57■□□□□ 0.88
RIPPLY3P57055 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.57■□□□□ 0.88
RIPPLY3P57055 AC018755.3-202ENST00000596210 929 ntBASIC20.57■□□□□ 0.88
RIPPLY3P57055 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.57■□□□□ 0.88
RIPPLY3P57055 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.57■□□□□ 0.88
RIPPLY3P57055 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RIPPLY3P57055 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RIPPLY3P57055 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
RIPPLY3P57055 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.56■□□□□ 0.88
RIPPLY3P57055 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.56■□□□□ 0.88
RIPPLY3P57055 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RIPPLY3P57055 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RIPPLY3P57055 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.55■□□□□ 0.88
RIPPLY3P57055 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RIPPLY3P57055 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RIPPLY3P57055 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RIPPLY3P57055 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RIPPLY3P57055 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RIPPLY3P57055 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RIPPLY3P57055 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RIPPLY3P57055 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RIPPLY3P57055 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.53■□□□□ 0.88
RIPPLY3P57055 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RIPPLY3P57055 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.53■□□□□ 0.88
RIPPLY3P57055 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RIPPLY3P57055 BX664725.1-201ENST00000438252 379 ntBASIC20.53■□□□□ 0.88
RIPPLY3P57055 AC090192.1-201ENST00000517740 490 ntBASIC20.53■□□□□ 0.88
RIPPLY3P57055 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.53■□□□□ 0.88
RIPPLY3P57055 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.53■□□□□ 0.88
RIPPLY3P57055 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RIPPLY3P57055 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RIPPLY3P57055 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RIPPLY3P57055 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RIPPLY3P57055 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.52■□□□□ 0.88
RIPPLY3P57055 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.52■□□□□ 0.88
RIPPLY3P57055 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.52■□□□□ 0.88
RIPPLY3P57055 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.52■□□□□ 0.88
RIPPLY3P57055 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RIPPLY3P57055 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RIPPLY3P57055 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.51■□□□□ 0.87
RIPPLY3P57055 AC142381.2-201ENST00000566120 298 ntBASIC20.51■□□□□ 0.87
RIPPLY3P57055 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RIPPLY3P57055 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RIPPLY3P57055 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.5■□□□□ 0.87
RIPPLY3P57055 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RIPPLY3P57055 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RIPPLY3P57055 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC20.5■□□□□ 0.87
RIPPLY3P57055 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RIPPLY3P57055 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.49■□□□□ 0.87
RIPPLY3P57055 ESRRAP2-201ENST00000418437 1549 ntBASIC20.48■□□□□ 0.87
RIPPLY3P57055 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.48■□□□□ 0.87
RIPPLY3P57055 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.48■□□□□ 0.87
RIPPLY3P57055 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RIPPLY3P57055 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.48■□□□□ 0.87
RIPPLY3P57055 RARRES2P11-201ENST00000635158 484 ntBASIC20.48■□□□□ 0.87
RIPPLY3P57055 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RIPPLY3P57055 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RIPPLY3P57055 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.47■□□□□ 0.87
RIPPLY3P57055 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RIPPLY3P57055 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.47■□□□□ 0.87
RIPPLY3P57055 RAP2CP1-202ENST00000605179 643 ntBASIC20.47■□□□□ 0.87
RIPPLY3P57055 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RIPPLY3P57055 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.46■□□□□ 0.87
RIPPLY3P57055 AC110285.7-201ENST00000624417 1536 ntBASIC20.46■□□□□ 0.87
RIPPLY3P57055 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
RIPPLY3P57055 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RIPPLY3P57055 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.45■□□□□ 0.86
RIPPLY3P57055 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RIPPLY3P57055 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RIPPLY3P57055 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.44■□□□□ 0.86
RIPPLY3P57055 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RIPPLY3P57055 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.44■□□□□ 0.86
RIPPLY3P57055 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
RIPPLY3P57055 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RIPPLY3P57055 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RIPPLY3P57055 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RIPPLY3P57055 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms