Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 PSMA4-219ENST00000560217 944 ntTSL 5 BASIC17.9■□□□□ 0.461e-6■■□□□ 12.1
DROSHAQ9NRR4 PSMA4-207ENST00000558635 736 ntTSL 1 (best)15.85■□□□□ 0.131e-6■■□□□ 12.1
DROSHAQ9NRR4 PSMA4-216ENST00000559948 710 ntTSL 513.91□□□□□ -0.181e-6■■□□□ 12.1
DROSHAQ9NRR4 CCDC26-202ENST00000520048 904 ntTSL 312.79□□□□□ -0.361e-6■■□□□ 12.1
DROSHAQ9NRR4 PSMA4-210ENST00000559146 674 ntTSL 212.57□□□□□ -0.41e-6■■□□□ 12.1
DROSHAQ9NRR4 PSMA4-208ENST00000558639 733 ntTSL 311.6□□□□□ -0.551e-6■■□□□ 12.1
DROSHAQ9NRR4 CCDC26-203ENST00000523151 1496 ntTSL 1 (best)11.25□□□□□ -0.611e-6■■□□□ 12.1
DROSHAQ9NRR4 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.621e-6■■□□□ 12.1
DROSHAQ9NRR4 PSMA4-217ENST00000560033 570 ntTSL 410.55□□□□□ -0.721e-6■■□□□ 12.1
DROSHAQ9NRR4 PSMA4-203ENST00000557929 635 ntTSL 510.52□□□□□ -0.721e-6■■□□□ 12.1
DROSHAQ9NRR4 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC9.51□□□□□ -0.891e-6■■□□□ 12.1
DROSHAQ9NRR4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.211e-6■■□□□ 12.1
DROSHAQ9NRR4 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.81□□□□□ -1.81e-6■■□□□ 12.1
DROSHAQ9NRR4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.34□□□□□ -2.041e-6■■□□□ 12.1
DROSHAQ9NRR4 FURIN-203ENST00000559353 587 ntTSL 324.47■■□□□ 1.512e-6■■□□□ 12.1
DROSHAQ9NRR4 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.882e-6■■□□□ 12.1
DROSHAQ9NRR4 DDX3X-214ENST00000622373 2129 nt30.76■■■□□ 2.512e-8■■□□□ 12.1
DROSHAQ9NRR4 DDX3X-210ENST00000615313 568 ntTSL 429.53■■■□□ 2.322e-8■■□□□ 12.1
DROSHAQ9NRR4 DDX3X-208ENST00000611546 442 ntTSL 526.08■■□□□ 1.772e-8■■□□□ 12.1
DROSHAQ9NRR4 DDX3X-213ENST00000622198 409 ntTSL 426.08■■□□□ 1.772e-8■■□□□ 12.1
DROSHAQ9NRR4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC40.44■■■■■ 4.064e-7■■□□□ 12.1
DROSHAQ9NRR4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC40.44■■■■■ 4.064e-7■■□□□ 12.1
DROSHAQ9NRR4 YWHAH-205ENST00000471374 1735 ntTSL 228.77■■■□□ 2.25e-10■■□□□ 12.1
DROSHAQ9NRR4 TMC6-204ENST00000585849 552 ntTSL 229.82■■■□□ 2.363e-7■■□□□ 12.1
DROSHAQ9NRR4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC29■■■□□ 2.234e-10■■□□□ 12.1
DROSHAQ9NRR4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC22.61■■□□□ 1.214e-10■■□□□ 12.1
DROSHAQ9NRR4 TNFRSF12A-207ENST00000575836 161 ntTSL 323.57■■□□□ 1.365e-6■■□□□ 12.1
DROSHAQ9NRR4 CPSF7-208ENST00000450000 574 ntTSL 433.81■■■■□ 31e-11■■□□□ 12.1
DROSHAQ9NRR4 CPSF7-209ENST00000463244 545 ntTSL 433.06■■■□□ 2.881e-11■■□□□ 12.1
DROSHAQ9NRR4 CPSF7-204ENST00000413232 727 ntTSL 330.16■■■□□ 2.421e-11■■□□□ 12.1
DROSHAQ9NRR4 CPSF7-225ENST00000545934 565 ntTSL 426.67■■□□□ 1.861e-11■■□□□ 12.1
DROSHAQ9NRR4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC22.93■■□□□ 1.261e-11■■□□□ 12.1
DROSHAQ9NRR4 CPSF7-207ENST00000449811 567 ntTSL 422.23■■□□□ 1.151e-11■■□□□ 12.1
DROSHAQ9NRR4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.091e-11■■□□□ 12.1
DROSHAQ9NRR4 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC19.79■□□□□ 0.761e-11■■□□□ 12.1
DROSHAQ9NRR4 CPSF7-223ENST00000544669 1800 ntTSL 518.99■□□□□ 0.631e-11■■□□□ 12.1
DROSHAQ9NRR4 CPSF7-211ENST00000477890 1234 ntTSL 518.55■□□□□ 0.561e-11■■□□□ 12.1
DROSHAQ9NRR4 CPSF7-218ENST00000537641 1728 ntTSL 517.37■□□□□ 0.371e-11■■□□□ 12.1
DROSHAQ9NRR4 CPSF7-217ENST00000537162 801 ntTSL 316.51■□□□□ 0.231e-11■■□□□ 12.1
DROSHAQ9NRR4 CPSF7-214ENST00000535222 940 ntTSL 313.08□□□□□ -0.311e-11■■□□□ 12.1
DROSHAQ9NRR4 CPSF7-216ENST00000536548 598 ntTSL 411.17□□□□□ -0.621e-11■■□□□ 12.1
DROSHAQ9NRR4 CPSF7-222ENST00000544585 722 ntTSL 29.56□□□□□ -0.881e-11■■□□□ 12.1
DROSHAQ9NRR4 CPSF7-219ENST00000539952 953 ntTSL 59.56□□□□□ -0.881e-11■■□□□ 12.1
DROSHAQ9NRR4 CPSF7-210ENST00000474684 635 ntTSL 39.32□□□□□ -0.921e-11■■□□□ 12.1
DROSHAQ9NRR4 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC8.03□□□□□ -1.121e-11■■□□□ 12.1
DROSHAQ9NRR4 TMC6-210ENST00000588792 843 ntTSL 227.91■■■□□ 2.062e-10■■□□□ 12
DROSHAQ9NRR4 TMC6-205ENST00000586126 821 ntTSL 325.44■■□□□ 1.662e-10■■□□□ 12
DROSHAQ9NRR4 TMC6-223ENST00000592594 551 ntTSL 425.16■■□□□ 1.622e-10■■□□□ 12
DROSHAQ9NRR4 TMC6-207ENST00000586697 571 ntTSL 422.76■■□□□ 1.232e-10■■□□□ 12
DROSHAQ9NRR4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC27.32■■□□□ 1.968e-7■■□□□ 12
DROSHAQ9NRR4 AGXT-202ENST00000470255 2638 ntTSL 224.9■■□□□ 1.585e-9■■□□□ 12
DROSHAQ9NRR4 GUK1-231ENST00000485859 325 ntTSL 1 (best)26.98■■□□□ 1.911e-8■■□□□ 12
DROSHAQ9NRR4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC39.37■■■■□ 3.897e-7■■□□□ 12
DROSHAQ9NRR4 DNM1-210ENST00000625457 333 ntTSL 230.37■■■□□ 2.454e-7■■□□□ 12
DROSHAQ9NRR4 DNM1-214ENST00000630850 3442 ntTSL 218.8■□□□□ 0.64e-7■■□□□ 12
DROSHAQ9NRR4 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC22.77■■□□□ 1.243e-10■■□□□ 12
DROSHAQ9NRR4 ZEB2-219ENST00000475115 536 ntTSL 511.92□□□□□ -0.52e-6■■□□□ 12
DROSHAQ9NRR4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.625e-7■■□□□ 12
DROSHAQ9NRR4 CCDC183-205ENST00000481601 1556 ntTSL 224.83■■□□□ 1.575e-7■■□□□ 12
DROSHAQ9NRR4 CCDC183-204ENST00000479371 1786 ntTSL 1 (best)23.35■■□□□ 1.335e-7■■□□□ 12
DROSHAQ9NRR4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC22.76■■□□□ 1.233e-7■■□□□ 12
DROSHAQ9NRR4 CCDC183-203ENST00000430612 2321 ntTSL 220.88■□□□□ 0.935e-7■■□□□ 12
DROSHAQ9NRR4 TMC6-211ENST00000589271 1099 ntTSL 526.26■■□□□ 1.792e-8■■□□□ 12
DROSHAQ9NRR4 BICRAL-203ENST00000614467 6510 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.147e-10■■□□□ 12
DROSHAQ9NRR4 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.467e-10■■□□□ 12
DROSHAQ9NRR4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC38.3■■■■□ 3.723e-8■■□□□ 12
DROSHAQ9NRR4 DDAH2-214ENST00000416410 887 ntTSL 231.43■■■□□ 2.623e-8■■□□□ 12
DROSHAQ9NRR4 DDAH2-215ENST00000436437 882 ntTSL 329.78■■■□□ 2.363e-8■■□□□ 12
DROSHAQ9NRR4 DDAH2-217ENST00000469963 1682 ntTSL 529.55■■■□□ 2.323e-8■■□□□ 12
DROSHAQ9NRR4 SMG1P3-202ENST00000437413 589 ntTSL 433.66■■■□□ 2.989e-7■■□□□ 12
DROSHAQ9NRR4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC23.46■■□□□ 1.359e-7■■□□□ 12
DROSHAQ9NRR4 STRN4-208ENST00000594581 2692 ntTSL 225.3■■□□□ 1.642e-6■■□□□ 12
DROSHAQ9NRR4 STRN4-211ENST00000595357 1602 ntTSL 223.64■■□□□ 1.372e-6■■□□□ 12
DROSHAQ9NRR4 STRN4-219ENST00000600615 788 ntTSL 218.9■□□□□ 0.622e-6■■□□□ 12
DROSHAQ9NRR4 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.832e-6■■□□□ 12
DROSHAQ9NRR4 FTCD-211ENST00000494498 840 ntTSL 329.89■■■□□ 2.371e-6■■□□□ 12
DROSHAQ9NRR4 FTCD-206ENST00000460011 1260 ntTSL 1 (best)29.34■■■□□ 2.291e-6■■□□□ 12
DROSHAQ9NRR4 NDUFS7-217ENST00000591358 3743 nt19.09■□□□□ 0.658e-8■■□□□ 12
DROSHAQ9NRR4 NDUFS6-203ENST00000510329 260 ntTSL 333.15■■■□□ 2.97e-11■■□□□ 12
DROSHAQ9NRR4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC30.48■■■□□ 2.477e-11■■□□□ 12
DROSHAQ9NRR4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.37e-11■■□□□ 12
DROSHAQ9NRR4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.962e-7■■□□□ 12
DROSHAQ9NRR4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC30.82■■■□□ 2.522e-7■■□□□ 12
DROSHAQ9NRR4 TCP1-217ENST00000546023 1135 ntTSL 1 (best)38.93■■■■□ 3.826e-7■■□□□ 12
DROSHAQ9NRR4 TCP1-214ENST00000543532 561 ntTSL 437.61■■■■□ 3.616e-7■■□□□ 12
DROSHAQ9NRR4 TCP1-209ENST00000538128 557 ntTSL 434.97■■■■□ 3.196e-7■■□□□ 12
DROSHAQ9NRR4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC34.16■■■■□ 3.066e-7■■□□□ 12
DROSHAQ9NRR4 TCP1-208ENST00000537390 691 ntTSL 530.11■■■□□ 2.416e-7■■□□□ 12
DROSHAQ9NRR4 TCP1-213ENST00000543517 561 ntTSL 430.04■■■□□ 2.46e-7■■□□□ 12
DROSHAQ9NRR4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC29.54■■■□□ 2.325e-6■■□□□ 12
DROSHAQ9NRR4 TCP1-206ENST00000536607 572 ntTSL 228.71■■■□□ 2.196e-7■■□□□ 12
DROSHAQ9NRR4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC25.55■■□□□ 1.686e-7■■□□□ 12
DROSHAQ9NRR4 TCP1-210ENST00000538530 918 ntTSL 523.34■■□□□ 1.336e-7■■□□□ 12
DROSHAQ9NRR4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.326e-7■■□□□ 12
DROSHAQ9NRR4 TCP1-211ENST00000539756 780 ntTSL 323.26■■□□□ 1.316e-7■■□□□ 12
DROSHAQ9NRR4 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC20.07■□□□□ 0.86e-7■■□□□ 12
DROSHAQ9NRR4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.761e-13■■□□□ 12
DROSHAQ9NRR4 SACM1L-208ENST00000463237 962 ntTSL 236.93■■■■□ 3.51e-7■■□□□ 12
DROSHAQ9NRR4 SACM1L-209ENST00000463347 854 ntTSL 233.43■■■□□ 2.941e-7■■□□□ 12
DROSHAQ9NRR4 SACM1L-204ENST00000438671 542 ntTSL 432.9■■■□□ 2.861e-7■■□□□ 12
Retrieved 100 of 16,331 protein–RNA pairs in 95.3 ms