RNA–Protein interactions for RNA: ENST00000611546.1

DDX3X-208, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 5

Gene DDX3X, Length 442 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-208ENST00000611546 NISCHQ9Y2I1 1504 aa41.27■■■■■ 4.2
DDX3X-208ENST00000611546 CCDC180Q9P1Z9 1646 aa36.68■■■■□ 3.46
DDX3X-208ENST00000611546 ABCC9O60706 1549 aa35.76■■■■□ 3.31
DDX3X-208ENST00000611546 RB1CC1Q8TDY2 1594 aa34.44■■■■□ 3.1
DDX3X-208ENST00000611546 ZCCHC6Q5VYS8 1495 aaKnown RBP34.43■■■■□ 3.1
DDX3X-208ENST00000611546 NACADO15069 1562 aa34.43■■■■□ 3.1
DDX3X-208ENST00000611546 DCAF8L2P0C7V8 631 aa34.29■■■■□ 3.08
DDX3X-208ENST00000611546 MYO15BQ96JP2 1530 aa34.28■■■■□ 3.08
DDX3X-208ENST00000611546 DCAF1Q9Y4B6 1507 aa34.16■■■■□ 3.06
DDX3X-208ENST00000611546 UNC13AQ9UPW8 1703 aa33.75■■■□□ 2.99
DDX3X-208ENST00000611546 BICRAQ9NZM4 1560 aa33.46■■■□□ 2.95
DDX3X-208ENST00000611546 SCRIBQ14160 1630 aa33.46■■■□□ 2.95
DDX3X-208ENST00000611546 PABPN1Q86U42 306 aaKnown RBP eCLIP33.39■■■□□ 2.94
DDX3X-208ENST00000611546 SHROOM4Q9ULL8 1493 aa33.07■■■□□ 2.88
DDX3X-208ENST00000611546 DNAJC5BQ9UF47 199 aa32.75■■■□□ 2.83
DDX3X-208ENST00000611546 EIF4G1Q04637 1599 aaKnown RBP32.53■■■□□ 2.8
DDX3X-208ENST00000611546 CC2D2AQ9P2K1 1620 aa32.38■■■□□ 2.77
DDX3X-208ENST00000611546 CECR2Q9BXF3 1484 aa32.16■■■□□ 2.74
DDX3X-208ENST00000611546 SMARCA4P51532 1647 aa32.03■■■□□ 2.72
DDX3X-208ENST00000611546 BAZ1AQ9NRL2 1556 aaPredicted RBP31.97■■■□□ 2.71
DDX3X-208ENST00000611546 MROH2BQ7Z745 1585 aa31.82■■■□□ 2.68
DDX3X-208ENST00000611546 ATAD2BQ9ULI0 1458 aa31.81■■■□□ 2.68
DDX3X-208ENST00000611546 NCAPD3P42695 1498 aa31.77■■■□□ 2.68
DDX3X-208ENST00000611546 SMARCA2P51531 1590 aa31.76■■■□□ 2.67
DDX3X-208ENST00000611546 PEG3Q9GZU2 1588 aa31.73■■■□□ 2.67
DDX3X-208ENST00000611546 HMGXB3Q12766 1538 aa31.65■■■□□ 2.66
DDX3X-208ENST00000611546 BAZ1BQ9UIG0 1483 aaKnown RBP31.52■■■□□ 2.64
DDX3X-208ENST00000611546 WIZO95785 1651 aa31.49■■■□□ 2.63
DDX3X-208ENST00000611546 RSF1Q96T23 1441 aaPredicted RBP31.47■■■□□ 2.63
DDX3X-208ENST00000611546 TOP2AP11388 1531 aaKnown RBP31.15■■■□□ 2.58
DDX3X-208ENST00000611546 NESP48681 1621 aa30.99■■■□□ 2.55
DDX3X-208ENST00000611546 LAMC3Q9Y6N6 1575 aa30.92■■■□□ 2.54
DDX3X-208ENST00000611546 CADPSQ9ULU8 1353 aa30.82■■■□□ 2.52
DDX3X-208ENST00000611546 ERCC6Q03468 1493 aa30.77■■■□□ 2.52
DDX3X-208ENST00000611546 CCDC88BA6NC98 1476 aa30.76■■■□□ 2.52
DDX3X-208ENST00000611546 CFTRP13569 1480 aa30.69■■■□□ 2.5
DDX3X-208ENST00000611546 PDS5BQ9NTI5 1447 aa30.66■■■□□ 2.5
DDX3X-208ENST00000611546 KIF21AQ7Z4S6 1674 aa30.65■■■□□ 2.5
DDX3X-208ENST00000611546 SUPT5HO00267 1087 aaKnown RBP30.64■■■□□ 2.5
DDX3X-208ENST00000611546 THOC2Q8NI27 1593 aaKnown RBP30.55■■■□□ 2.48
DDX3X-208ENST00000611546 PRDM2Q13029 1718 aa30.52■■■□□ 2.48
DDX3X-208ENST00000611546 FANCD2Q9BXW9 1451 aa30.49■■■□□ 2.47
DDX3X-208ENST00000611546 CUX2O14529 1486 aa30.46■■■□□ 2.47
DDX3X-208ENST00000611546 CEP164Q9UPV0 1460 aa30.44■■■□□ 2.46
DDX3X-208ENST00000611546 MRC2Q9UBG0 1479 aa30.38■■■□□ 2.45
DDX3X-208ENST00000611546 WDR62O43379 1518 aa30.32■■■□□ 2.44
DDX3X-208ENST00000611546 URB2Q14146 1524 aaKnown RBP30.21■■■□□ 2.43
DDX3X-208ENST00000611546 TOPBP1Q92547 1522 aa30.03■■■□□ 2.4
DDX3X-208ENST00000611546 DNMBPQ6XZF7 1577 aa30■■■□□ 2.39
DDX3X-208ENST00000611546 ABCC8Q09428 1581 aa29.98■■■□□ 2.39
DDX3X-208ENST00000611546 CUX1P39880 1505 aa29.85■■■□□ 2.37
DDX3X-208ENST00000611546 POLA1P09884 1462 aaPredicted RBP29.79■■■□□ 2.36
DDX3X-208ENST00000611546 IFT140Q96RY7 1462 aa29.79■■■□□ 2.36
DDX3X-208ENST00000611546 TARBP1Q13395 1621 aaKnown RBP29.72■■■□□ 2.35
DDX3X-208ENST00000611546 FGD5Q6ZNL6 1462 aa29.72■■■□□ 2.35
DDX3X-208ENST00000611546 ZNF608Q9ULD9 1512 aaPredicted RBP29.68■■■□□ 2.34
DDX3X-208ENST00000611546 WRNQ14191 1432 aaPredicted RBP eCLIP29.65■■■□□ 2.34
DDX3X-208ENST00000611546 RAD54L2Q9Y4B4 1467 aa29.64■■■□□ 2.34
DDX3X-208ENST00000611546 SYNJ1O43426 1573 aa29.63■■■□□ 2.33
DDX3X-208ENST00000611546 BIVM-ERCC5R4GMW8 1640 aa29.63■■■□□ 2.33
DDX3X-208ENST00000611546 TOP2BQ02880 1626 aa29.61■■■□□ 2.33
DDX3X-208ENST00000611546 SOGA1O94964 1423 aa29.61■■■□□ 2.33
DDX3X-208ENST00000611546 EIF4G3O43432 1585 aaKnown RBP29.59■■■□□ 2.33
DDX3X-208ENST00000611546 WDR97A6NE52 1622 aa29.53■■■□□ 2.32
DDX3X-208ENST00000611546 AQRO60306 1485 aaKnown RBP eCLIP29.49■■■□□ 2.312e-8■■■□□ 15.1
DDX3X-208ENST00000611546 ABCA10Q8WWZ4 1543 aa29.44■■■□□ 2.3
DDX3X-208ENST00000611546 TDRD9Q8NDG6 1382 aaKnown RBP29.43■■■□□ 2.3
DDX3X-208ENST00000611546 DNAJC5Q9H3Z4 198 aa29.37■■■□□ 2.29
DDX3X-208ENST00000611546 ABCA5Q8WWZ7 1642 aa29.35■■■□□ 2.29
DDX3X-208ENST00000611546 GAPVD1Q14C86 1478 aa29.29■■■□□ 2.28
DDX3X-208ENST00000611546 PBRM1Q86U86 1689 aa29.28■■■□□ 2.28
DDX3X-208ENST00000611546 GRIN2BQ13224 1484 aa29.27■■■□□ 2.28
DDX3X-208ENST00000611546 SNAPC4Q5SXM2 1469 aa29.24■■■□□ 2.27
DDX3X-208ENST00000611546 MAGI1Q96QZ7 1491 aaPredicted RBP29.2■■■□□ 2.26
DDX3X-208ENST00000611546 CHD1O14646 1710 aa29.2■■■□□ 2.26
DDX3X-208ENST00000611546 OSCARQ8IYS5 282 aa29.13■■■□□ 2.25
DDX3X-208ENST00000611546 SYNJ2O15056 1496 aa29.08■■■□□ 2.25
DDX3X-208ENST00000611546 ERICH3Q5RHP9 1530 aa29.08■■■□□ 2.25
DDX3X-208ENST00000611546 ADAMTS12P58397 1594 aa29.05■■■□□ 2.24
DDX3X-208ENST00000611546 FBLN2P98095 1184 aa29.03■■■□□ 2.24
DDX3X-208ENST00000611546 KIF27Q86VH2 1401 aa29■■■□□ 2.23
DDX3X-208ENST00000611546 CHMP7Q8WUX9 453 aaPredicted RBP28.98■■■□□ 2.23
DDX3X-208ENST00000611546 FHAD1B1AJZ9 1412 aa28.94■■■□□ 2.22
DDX3X-208ENST00000611546 TRIM41Q8WV44 630 aa28.93■■■□□ 2.22
DDX3X-208ENST00000611546 GRIN2AQ12879 1464 aa28.91■■■□□ 2.22
DDX3X-208ENST00000611546 CLASP1Q7Z460 1538 aa28.89■■■□□ 2.21
DDX3X-208ENST00000611546 IGF1RP08069 1367 aa28.88■■■□□ 2.21
DDX3X-208ENST00000611546 CUL7Q14999 1698 aa28.84■■■□□ 2.21
DDX3X-208ENST00000611546 RUSC2Q8N2Y8 1516 aa28.82■■■□□ 2.2
DDX3X-208ENST00000611546 CEP170Q5SW79 1584 aa28.8■■■□□ 2.2
DDX3X-208ENST00000611546 NUP160Q12769 1436 aa28.8■■■□□ 2.2
DDX3X-208ENST00000611546 RIMBP3CA6NJZ7 1639 aa28.76■■■□□ 2.19
DDX3X-208ENST00000611546 RIMBP3BA6NNM3 1639 aa28.76■■■□□ 2.19
DDX3X-208ENST00000611546 RIMBP3Q9UFD9 1639 aa28.76■■■□□ 2.19
DDX3X-208ENST00000611546 ARHGEF11O15085 1522 aa28.75■■■□□ 2.19
DDX3X-208ENST00000611546 CARMIL1Q5VZK9 1371 aa28.7■■■□□ 2.18
DDX3X-208ENST00000611546 CHIC1Q5VXU3 224 aa28.69■■■□□ 2.18
DDX3X-208ENST00000611546 SHROOM2Q13796 1616 aa28.6■■■□□ 2.17
DDX3X-208ENST00000611546 RAPGEF2Q9Y4G8 1499 aa28.56■■■□□ 2.16
DDX3X-208ENST00000611546 ARAP1Q96P48 1450 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms