RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 NISCHQ9Y2I1 1504 aa25.42■■□□□ 1.66
CPSF7-217ENST00000537162 ABCC9O60706 1549 aa24.45■■□□□ 1.51
CPSF7-217ENST00000537162 DNAJC5BQ9UF47 199 aa24.02■■□□□ 1.44
CPSF7-217ENST00000537162 CCDC180Q9P1Z9 1646 aa23.28■■□□□ 1.32
CPSF7-217ENST00000537162 DNAJC5Q9H3Z4 198 aa22.74■■□□□ 1.23
CPSF7-217ENST00000537162 RB1CC1Q8TDY2 1594 aa22.68■■□□□ 1.22
CPSF7-217ENST00000537162 PABPN1Q86U42 306 aaKnown RBP eCLIP22.6■■□□□ 1.21
CPSF7-217ENST00000537162 UNC13AQ9UPW8 1703 aa22.34■■□□□ 1.17
CPSF7-217ENST00000537162 NACADO15069 1562 aa22.24■■□□□ 1.15
CPSF7-217ENST00000537162 BICRAQ9NZM4 1560 aa22.2■■□□□ 1.14
CPSF7-217ENST00000537162 CECR2Q9BXF3 1484 aa22.09■■□□□ 1.13
CPSF7-217ENST00000537162 CC2D2AQ9P2K1 1620 aa22.02■■□□□ 1.12
CPSF7-217ENST00000537162 DCAF8L2P0C7V8 631 aa21.95■■□□□ 1.1
CPSF7-217ENST00000537162 EIF4G1Q04637 1599 aaKnown RBP21.67■■□□□ 1.06
CPSF7-217ENST00000537162 SHROOM4Q9ULL8 1493 aa21.55■■□□□ 1.04
CPSF7-217ENST00000537162 MYO15BQ96JP2 1530 aa21.52■■□□□ 1.04
CPSF7-217ENST00000537162 CUX2O14529 1486 aa21.42■■□□□ 1.02
CPSF7-217ENST00000537162 TRIM41Q8WV44 630 aa21.31■■□□□ 1
CPSF7-217ENST00000537162 SCRIBQ14160 1630 aa21.23■□□□□ 0.99
CPSF7-217ENST00000537162 ERCC6Q03468 1493 aa21.1■□□□□ 0.97
CPSF7-217ENST00000537162 DCAF1Q9Y4B6 1507 aa20.86■□□□□ 0.93
CPSF7-217ENST00000537162 ZCCHC6Q5VYS8 1495 aaKnown RBP20.83■□□□□ 0.93
CPSF7-217ENST00000537162 NESP48681 1621 aa20.74■□□□□ 0.91
CPSF7-217ENST00000537162 THOC2Q8NI27 1593 aaKnown RBP20.71■□□□□ 0.91
CPSF7-217ENST00000537162 NCAPD3P42695 1498 aa20.56■□□□□ 0.88
CPSF7-217ENST00000537162 SMARCA2P51531 1590 aa20.48■□□□□ 0.87
CPSF7-217ENST00000537162 KIF21AQ7Z4S6 1674 aa20.42■□□□□ 0.86
CPSF7-217ENST00000537162 ATAD2BQ9ULI0 1458 aa20.38■□□□□ 0.85
CPSF7-217ENST00000537162 BAZ1AQ9NRL2 1556 aaPredicted RBP20.36■□□□□ 0.85
CPSF7-217ENST00000537162 HMGXB3Q12766 1538 aa20.3■□□□□ 0.84
CPSF7-217ENST00000537162 LAMC3Q9Y6N6 1575 aa20.27■□□□□ 0.84
CPSF7-217ENST00000537162 OSCARQ8IYS5 282 aa20.25■□□□□ 0.83
CPSF7-217ENST00000537162 RIMBP3CA6NJZ7 1639 aa20.24■□□□□ 0.83
CPSF7-217ENST00000537162 RIMBP3BA6NNM3 1639 aa20.24■□□□□ 0.83
CPSF7-217ENST00000537162 RIMBP3Q9UFD9 1639 aa20.24■□□□□ 0.83
CPSF7-217ENST00000537162 AEBP2Q6ZN18 517 aaPredicted RBP20.22■□□□□ 0.83
CPSF7-217ENST00000537162 PDS5BQ9NTI5 1447 aa20.14■□□□□ 0.81
CPSF7-217ENST00000537162 WDR62O43379 1518 aa20.11■□□□□ 0.81
CPSF7-217ENST00000537162 MRC2Q9UBG0 1479 aa20.11■□□□□ 0.81
CPSF7-217ENST00000537162 SMARCA4P51532 1647 aa20.1■□□□□ 0.81
CPSF7-217ENST00000537162 BAZ1BQ9UIG0 1483 aaKnown RBP20.09■□□□□ 0.81
CPSF7-217ENST00000537162 TRHP20396 242 aaPredicted RBP20.03■□□□□ 0.8
CPSF7-217ENST00000537162 ARHGEF11O15085 1522 aa20.01■□□□□ 0.79
CPSF7-217ENST00000537162 CYB5RLQ6IPT4 315 aa19.92■□□□□ 0.78
CPSF7-217ENST00000537162 CADPSQ9ULU8 1353 aa19.87■□□□□ 0.77
CPSF7-217ENST00000537162 PEG3Q9GZU2 1588 aa19.87■□□□□ 0.77
CPSF7-217ENST00000537162 CEP164Q9UPV0 1460 aa19.79■□□□□ 0.76
CPSF7-217ENST00000537162 ARAP1Q96P48 1450 aa19.77■□□□□ 0.76
CPSF7-217ENST00000537162 FANCD2Q9BXW9 1451 aa19.69■□□□□ 0.74
CPSF7-217ENST00000537162 ILDR1Q86SU0 546 aaPredicted RBP19.68■□□□□ 0.74
CPSF7-217ENST00000537162 URB2Q14146 1524 aaKnown RBP19.66■□□□□ 0.74
CPSF7-217ENST00000537162 MROH2BQ7Z745 1585 aa19.65■□□□□ 0.74
CPSF7-217ENST00000537162 ZNF608Q9ULD9 1512 aaPredicted RBP19.62■□□□□ 0.73
CPSF7-217ENST00000537162 CHD1O14646 1710 aa19.53■□□□□ 0.72
CPSF7-217ENST00000537162 RSF1Q96T23 1441 aaPredicted RBP19.44■□□□□ 0.7
CPSF7-217ENST00000537162 CFTRP13569 1480 aa19.43■□□□□ 0.7
CPSF7-217ENST00000537162 EIF4G3O43432 1585 aaKnown RBP19.42■□□□□ 0.7
CPSF7-217ENST00000537162 IFT140Q96RY7 1462 aa19.41■□□□□ 0.7
CPSF7-217ENST00000537162 WIZO95785 1651 aa19.38■□□□□ 0.69
CPSF7-217ENST00000537162 FBLN2P98095 1184 aa19.31■□□□□ 0.68
CPSF7-217ENST00000537162 AQRO60306 1485 aaKnown RBP eCLIP19.27■□□□□ 0.673e-7■■■■■ 40.5
CPSF7-217ENST00000537162 CLASP1Q7Z460 1538 aa19.23■□□□□ 0.67
CPSF7-217ENST00000537162 TOPBP1Q92547 1522 aa19.21■□□□□ 0.67
CPSF7-217ENST00000537162 PRDM2Q13029 1718 aa19.19■□□□□ 0.66
CPSF7-217ENST00000537162 TARBP1Q13395 1621 aaKnown RBP19.16■□□□□ 0.66
CPSF7-217ENST00000537162 KDM4FA0A1W2PPD8 638 aa19.12■□□□□ 0.65
CPSF7-217ENST00000537162 GAPVD1Q14C86 1478 aa19.08■□□□□ 0.64
CPSF7-217ENST00000537162 KIF13AQ9H1H9 1805 aa19.04■□□□□ 0.64
CPSF7-217ENST00000537162 SYNJ1O43426 1573 aa19.04■□□□□ 0.64
CPSF7-217ENST00000537162 SNAPC4Q5SXM2 1469 aa19.02■□□□□ 0.63
CPSF7-217ENST00000537162 DNMBPQ6XZF7 1577 aa19.02■□□□□ 0.63
CPSF7-217ENST00000537162 TDRD9Q8NDG6 1382 aaKnown RBP18.96■□□□□ 0.63
CPSF7-217ENST00000537162 TOP2AP11388 1531 aaKnown RBP18.96■□□□□ 0.63
CPSF7-217ENST00000537162 ABCC8Q09428 1581 aa18.96■□□□□ 0.63
CPSF7-217ENST00000537162 ERCC6L2Q5T890 1561 aa18.95■□□□□ 0.62
CPSF7-217ENST00000537162 RAD54L2Q9Y4B4 1467 aa18.95■□□□□ 0.62
CPSF7-217ENST00000537162 CHMP7Q8WUX9 453 aaPredicted RBP18.94■□□□□ 0.62
CPSF7-217ENST00000537162 POLA1P09884 1462 aaPredicted RBP18.94■□□□□ 0.62
CPSF7-217ENST00000537162 MAGI1Q96QZ7 1491 aaPredicted RBP18.84■□□□□ 0.61
CPSF7-217ENST00000537162 SYNJ2O15056 1496 aa18.82■□□□□ 0.6
CPSF7-217ENST00000537162 SOGA1O94964 1423 aa18.81■□□□□ 0.6
CPSF7-217ENST00000537162 CCDC88BA6NC98 1476 aa18.8■□□□□ 0.6
CPSF7-217ENST00000537162 HECW2Q9P2P5 1572 aa18.8■□□□□ 0.6
CPSF7-217ENST00000537162 KDM6BO15054 1643 aa18.76■□□□□ 0.59
CPSF7-217ENST00000537162 GRIN2BQ13224 1484 aa18.75■□□□□ 0.59
CPSF7-217ENST00000537162 WDR97A6NE52 1622 aa18.74■□□□□ 0.59
CPSF7-217ENST00000537162 FAM69CQ0P6D2 419 aa18.72■□□□□ 0.59
CPSF7-217ENST00000537162 CEP170Q5SW79 1584 aa18.71■□□□□ 0.59
CPSF7-217ENST00000537162 FBXO41Q8TF61 875 aa18.7■□□□□ 0.58
CPSF7-217ENST00000537162 PBRM1Q86U86 1689 aa18.69■□□□□ 0.58
CPSF7-217ENST00000537162 ABCC10Q5T3U5 1492 aa18.68■□□□□ 0.58
CPSF7-217ENST00000537162 ADGRL1O94910 1474 aa18.67■□□□□ 0.58
CPSF7-217ENST00000537162 FGD5Q6ZNL6 1462 aa18.67■□□□□ 0.58
CPSF7-217ENST00000537162 DIP2BQ9P265 1576 aa18.65■□□□□ 0.58
CPSF7-217ENST00000537162 TSPOAP1O95153 1857 aa18.63■□□□□ 0.57
CPSF7-217ENST00000537162 SHROOM2Q13796 1616 aa18.6■□□□□ 0.57
CPSF7-217ENST00000537162 LMTK3Q96Q04 1460 aa18.58■□□□□ 0.57
CPSF7-217ENST00000537162 CHIC1Q5VXU3 224 aa18.55■□□□□ 0.56
CPSF7-217ENST00000537162 GRIN2AQ12879 1464 aa18.53■□□□□ 0.56
CPSF7-217ENST00000537162 MAPKBP1O60336 1514 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms