RNA–Protein interactions for RNA: ENST00000622198.4

DDX3X-213, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 4

Gene DDX3X, Length 409 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-213ENST00000622198 NISCHQ9Y2I1 1504 aa41.27■■■■■ 4.2
DDX3X-213ENST00000622198 CCDC180Q9P1Z9 1646 aa36.68■■■■□ 3.46
DDX3X-213ENST00000622198 ABCC9O60706 1549 aa36.08■■■■□ 3.37
DDX3X-213ENST00000622198 RB1CC1Q8TDY2 1594 aa34.45■■■■□ 3.1
DDX3X-213ENST00000622198 ZCCHC6Q5VYS8 1495 aaKnown RBP34.43■■■■□ 3.1
DDX3X-213ENST00000622198 NACADO15069 1562 aa34.43■■■■□ 3.1
DDX3X-213ENST00000622198 DCAF8L2P0C7V8 631 aa34.33■■■■□ 3.09
DDX3X-213ENST00000622198 MYO15BQ96JP2 1530 aa34.28■■■■□ 3.08
DDX3X-213ENST00000622198 DCAF1Q9Y4B6 1507 aa34.16■■■■□ 3.06
DDX3X-213ENST00000622198 UNC13AQ9UPW8 1703 aa33.87■■■■□ 3.01
DDX3X-213ENST00000622198 PABPN1Q86U42 306 aaKnown RBP eCLIP33.69■■■□□ 2.98
DDX3X-213ENST00000622198 BICRAQ9NZM4 1560 aa33.55■■■□□ 2.96
DDX3X-213ENST00000622198 DNAJC5BQ9UF47 199 aa33.5■■■□□ 2.95
DDX3X-213ENST00000622198 SCRIBQ14160 1630 aa33.46■■■□□ 2.95
DDX3X-213ENST00000622198 SHROOM4Q9ULL8 1493 aa33.07■■■□□ 2.88
DDX3X-213ENST00000622198 EIF4G1Q04637 1599 aaKnown RBP32.63■■■□□ 2.81
DDX3X-213ENST00000622198 CC2D2AQ9P2K1 1620 aa32.61■■■□□ 2.81
DDX3X-213ENST00000622198 CECR2Q9BXF3 1484 aa32.39■■■□□ 2.78
DDX3X-213ENST00000622198 SMARCA4P51532 1647 aa32.03■■■□□ 2.72
DDX3X-213ENST00000622198 BAZ1AQ9NRL2 1556 aaPredicted RBP31.97■■■□□ 2.71
DDX3X-213ENST00000622198 MROH2BQ7Z745 1585 aa31.82■■■□□ 2.68
DDX3X-213ENST00000622198 ATAD2BQ9ULI0 1458 aa31.81■■■□□ 2.68
DDX3X-213ENST00000622198 NCAPD3P42695 1498 aa31.77■■■□□ 2.68
DDX3X-213ENST00000622198 SMARCA2P51531 1590 aa31.76■■■□□ 2.67
DDX3X-213ENST00000622198 PEG3Q9GZU2 1588 aa31.73■■■□□ 2.67
DDX3X-213ENST00000622198 HMGXB3Q12766 1538 aa31.65■■■□□ 2.66
DDX3X-213ENST00000622198 BAZ1BQ9UIG0 1483 aaKnown RBP31.52■■■□□ 2.64
DDX3X-213ENST00000622198 WIZO95785 1651 aa31.49■■■□□ 2.63
DDX3X-213ENST00000622198 RSF1Q96T23 1441 aaPredicted RBP31.47■■■□□ 2.63
DDX3X-213ENST00000622198 NESP48681 1621 aa31.17■■■□□ 2.58
DDX3X-213ENST00000622198 TOP2AP11388 1531 aaKnown RBP31.15■■■□□ 2.58
DDX3X-213ENST00000622198 ERCC6Q03468 1493 aa31.02■■■□□ 2.56
DDX3X-213ENST00000622198 LAMC3Q9Y6N6 1575 aa30.92■■■□□ 2.54
DDX3X-213ENST00000622198 CADPSQ9ULU8 1353 aa30.82■■■□□ 2.52
DDX3X-213ENST00000622198 KIF21AQ7Z4S6 1674 aa30.81■■■□□ 2.52
DDX3X-213ENST00000622198 CUX2O14529 1486 aa30.77■■■□□ 2.52
DDX3X-213ENST00000622198 CCDC88BA6NC98 1476 aa30.76■■■□□ 2.52
DDX3X-213ENST00000622198 THOC2Q8NI27 1593 aaKnown RBP30.72■■■□□ 2.51
DDX3X-213ENST00000622198 CFTRP13569 1480 aa30.69■■■□□ 2.5
DDX3X-213ENST00000622198 PDS5BQ9NTI5 1447 aa30.66■■■□□ 2.5
DDX3X-213ENST00000622198 SUPT5HO00267 1087 aaKnown RBP30.64■■■□□ 2.5
DDX3X-213ENST00000622198 PRDM2Q13029 1718 aa30.52■■■□□ 2.48
DDX3X-213ENST00000622198 FANCD2Q9BXW9 1451 aa30.49■■■□□ 2.47
DDX3X-213ENST00000622198 CEP164Q9UPV0 1460 aa30.44■■■□□ 2.46
DDX3X-213ENST00000622198 MRC2Q9UBG0 1479 aa30.43■■■□□ 2.46
DDX3X-213ENST00000622198 WDR62O43379 1518 aa30.35■■■□□ 2.45
DDX3X-213ENST00000622198 DNAJC5Q9H3Z4 198 aa30.27■■■□□ 2.44
DDX3X-213ENST00000622198 URB2Q14146 1524 aaKnown RBP30.21■■■□□ 2.43
DDX3X-213ENST00000622198 TOPBP1Q92547 1522 aa30.03■■■□□ 2.4
DDX3X-213ENST00000622198 DNMBPQ6XZF7 1577 aa30■■■□□ 2.39
DDX3X-213ENST00000622198 ABCC8Q09428 1581 aa29.98■■■□□ 2.39
DDX3X-213ENST00000622198 CUX1P39880 1505 aa29.85■■■□□ 2.37
DDX3X-213ENST00000622198 POLA1P09884 1462 aaPredicted RBP29.79■■■□□ 2.36
DDX3X-213ENST00000622198 IFT140Q96RY7 1462 aa29.79■■■□□ 2.36
DDX3X-213ENST00000622198 ZNF608Q9ULD9 1512 aaPredicted RBP29.77■■■□□ 2.36
DDX3X-213ENST00000622198 TARBP1Q13395 1621 aaKnown RBP29.72■■■□□ 2.35
DDX3X-213ENST00000622198 FGD5Q6ZNL6 1462 aa29.72■■■□□ 2.35
DDX3X-213ENST00000622198 WRNQ14191 1432 aaPredicted RBP eCLIP29.65■■■□□ 2.34
DDX3X-213ENST00000622198 RAD54L2Q9Y4B4 1467 aa29.64■■■□□ 2.34
DDX3X-213ENST00000622198 SYNJ1O43426 1573 aa29.63■■■□□ 2.33
DDX3X-213ENST00000622198 BIVM-ERCC5R4GMW8 1640 aa29.63■■■□□ 2.33
DDX3X-213ENST00000622198 TOP2BQ02880 1626 aa29.61■■■□□ 2.33
DDX3X-213ENST00000622198 SOGA1O94964 1423 aa29.61■■■□□ 2.33
DDX3X-213ENST00000622198 EIF4G3O43432 1585 aaKnown RBP29.6■■■□□ 2.33
DDX3X-213ENST00000622198 AQRO60306 1485 aaKnown RBP eCLIP29.55■■■□□ 2.322e-8■■■□□ 15.1
DDX3X-213ENST00000622198 WDR97A6NE52 1622 aa29.53■■■□□ 2.32
DDX3X-213ENST00000622198 OSCARQ8IYS5 282 aa29.46■■■□□ 2.31
DDX3X-213ENST00000622198 ABCA10Q8WWZ4 1543 aa29.44■■■□□ 2.3
DDX3X-213ENST00000622198 TDRD9Q8NDG6 1382 aaKnown RBP29.43■■■□□ 2.3
DDX3X-213ENST00000622198 ABCA5Q8WWZ7 1642 aa29.35■■■□□ 2.29
DDX3X-213ENST00000622198 CHD1O14646 1710 aa29.35■■■□□ 2.29
DDX3X-213ENST00000622198 GAPVD1Q14C86 1478 aa29.29■■■□□ 2.28
DDX3X-213ENST00000622198 PBRM1Q86U86 1689 aa29.28■■■□□ 2.28
DDX3X-213ENST00000622198 GRIN2BQ13224 1484 aa29.27■■■□□ 2.28
DDX3X-213ENST00000622198 SNAPC4Q5SXM2 1469 aa29.24■■■□□ 2.27
DDX3X-213ENST00000622198 TRIM41Q8WV44 630 aa29.22■■■□□ 2.27
DDX3X-213ENST00000622198 FBLN2P98095 1184 aa29.21■■■□□ 2.27
DDX3X-213ENST00000622198 MAGI1Q96QZ7 1491 aaPredicted RBP29.2■■■□□ 2.26
DDX3X-213ENST00000622198 RIMBP3CA6NJZ7 1639 aa29.14■■■□□ 2.26
DDX3X-213ENST00000622198 RIMBP3BA6NNM3 1639 aa29.14■■■□□ 2.26
DDX3X-213ENST00000622198 RIMBP3Q9UFD9 1639 aa29.14■■■□□ 2.26
DDX3X-213ENST00000622198 SYNJ2O15056 1496 aa29.08■■■□□ 2.25
DDX3X-213ENST00000622198 ERICH3Q5RHP9 1530 aa29.08■■■□□ 2.25
DDX3X-213ENST00000622198 ADAMTS12P58397 1594 aa29.05■■■□□ 2.24
DDX3X-213ENST00000622198 ARHGEF11O15085 1522 aa29.05■■■□□ 2.24
DDX3X-213ENST00000622198 CHMP7Q8WUX9 453 aaPredicted RBP29.02■■■□□ 2.24
DDX3X-213ENST00000622198 KIF27Q86VH2 1401 aa29■■■□□ 2.23
DDX3X-213ENST00000622198 CLASP1Q7Z460 1538 aa28.95■■■□□ 2.23
DDX3X-213ENST00000622198 FHAD1B1AJZ9 1412 aa28.94■■■□□ 2.22
DDX3X-213ENST00000622198 GRIN2AQ12879 1464 aa28.91■■■□□ 2.22
DDX3X-213ENST00000622198 IGF1RP08069 1367 aa28.88■■■□□ 2.21
DDX3X-213ENST00000622198 CUL7Q14999 1698 aa28.84■■■□□ 2.21
DDX3X-213ENST00000622198 ARAP1Q96P48 1450 aa28.83■■■□□ 2.21
DDX3X-213ENST00000622198 RUSC2Q8N2Y8 1516 aa28.82■■■□□ 2.2
DDX3X-213ENST00000622198 CYB5RLQ6IPT4 315 aa28.81■■■□□ 2.2
DDX3X-213ENST00000622198 CEP170Q5SW79 1584 aa28.8■■■□□ 2.2
DDX3X-213ENST00000622198 NUP160Q12769 1436 aa28.8■■■□□ 2.2
DDX3X-213ENST00000622198 CARMIL1Q5VZK9 1371 aa28.7■■■□□ 2.18
DDX3X-213ENST00000622198 CHIC1Q5VXU3 224 aa28.69■■■□□ 2.18
DDX3X-213ENST00000622198 ERCC6L2Q5T890 1561 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms