Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC28.97■■■□□ 2.23
PTPN22Q9Y2R2 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC28.97■■■□□ 2.23
PTPN22Q9Y2R2 SMPD5-203ENST00000639008 1464 ntBASIC28.97■■■□□ 2.23
PTPN22Q9Y2R2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
PTPN22Q9Y2R2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
PTPN22Q9Y2R2 YBX1P4-201ENST00000392794 808 ntBASIC28.96■■■□□ 2.23
PTPN22Q9Y2R2 AC103834.1-201ENST00000520383 144 ntBASIC28.96■■■□□ 2.23
PTPN22Q9Y2R2 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC28.95■■■□□ 2.23
PTPN22Q9Y2R2 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
PTPN22Q9Y2R2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC28.95■■■□□ 2.22
PTPN22Q9Y2R2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
PTPN22Q9Y2R2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC28.94■■■□□ 2.22
PTPN22Q9Y2R2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC28.94■■■□□ 2.22
PTPN22Q9Y2R2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC28.93■■■□□ 2.22
PTPN22Q9Y2R2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC28.93■■■□□ 2.22
PTPN22Q9Y2R2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC28.93■■■□□ 2.22
PTPN22Q9Y2R2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
PTPN22Q9Y2R2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC28.92■■■□□ 2.22
PTPN22Q9Y2R2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC28.92■■■□□ 2.22
PTPN22Q9Y2R2 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC28.92■■■□□ 2.22
PTPN22Q9Y2R2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
PTPN22Q9Y2R2 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC28.92■■■□□ 2.22
PTPN22Q9Y2R2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
PTPN22Q9Y2R2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC28.92■■■□□ 2.22
PTPN22Q9Y2R2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC28.91■■■□□ 2.22
PTPN22Q9Y2R2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC28.91■■■□□ 2.22
PTPN22Q9Y2R2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC28.9■■■□□ 2.22
PTPN22Q9Y2R2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC28.9■■■□□ 2.22
PTPN22Q9Y2R2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC28.9■■■□□ 2.22
PTPN22Q9Y2R2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
PTPN22Q9Y2R2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC28.89■■■□□ 2.22
PTPN22Q9Y2R2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC28.89■■■□□ 2.22
PTPN22Q9Y2R2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
PTPN22Q9Y2R2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
PTPN22Q9Y2R2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC28.88■■■□□ 2.21
PTPN22Q9Y2R2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC28.88■■■□□ 2.21
PTPN22Q9Y2R2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
PTPN22Q9Y2R2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC28.88■■■□□ 2.21
PTPN22Q9Y2R2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
PTPN22Q9Y2R2 AL356441.2-201ENST00000443009 864 ntBASIC28.87■■■□□ 2.21
PTPN22Q9Y2R2 SPCS2P3-201ENST00000500401 656 ntBASIC28.87■■■□□ 2.21
PTPN22Q9Y2R2 AC139795.1-202ENST00000500444 432 ntBASIC28.87■■■□□ 2.21
PTPN22Q9Y2R2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC28.87■■■□□ 2.21
PTPN22Q9Y2R2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC28.86■■■□□ 2.21
PTPN22Q9Y2R2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
PTPN22Q9Y2R2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
PTPN22Q9Y2R2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
PTPN22Q9Y2R2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
PTPN22Q9Y2R2 PVT1_1.1-201ENST00000615125 194 ntBASIC28.84■■■□□ 2.21
PTPN22Q9Y2R2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PTPN22Q9Y2R2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.83■■■□□ 2.21
PTPN22Q9Y2R2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PTPN22Q9Y2R2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
PTPN22Q9Y2R2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC28.82■■■□□ 2.2
PTPN22Q9Y2R2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
PTPN22Q9Y2R2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC28.81■■■□□ 2.2
PTPN22Q9Y2R2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC28.8■■■□□ 2.2
PTPN22Q9Y2R2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC28.8■■■□□ 2.2
PTPN22Q9Y2R2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PTPN22Q9Y2R2 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PTPN22Q9Y2R2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PTPN22Q9Y2R2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
PTPN22Q9Y2R2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
PTPN22Q9Y2R2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC28.79■■■□□ 2.2
PTPN22Q9Y2R2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
PTPN22Q9Y2R2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC28.78■■■□□ 2.2
PTPN22Q9Y2R2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC28.78■■■□□ 2.2
PTPN22Q9Y2R2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
PTPN22Q9Y2R2 AC025884.2-201ENST00000553429 711 ntBASIC28.78■■■□□ 2.2
PTPN22Q9Y2R2 MIR6765-201ENST00000614092 87 ntBASIC28.78■■■□□ 2.2
PTPN22Q9Y2R2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC28.78■■■□□ 2.2
PTPN22Q9Y2R2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC28.78■■■□□ 2.2
PTPN22Q9Y2R2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC28.78■■■□□ 2.2
PTPN22Q9Y2R2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
PTPN22Q9Y2R2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC28.77■■■□□ 2.2
PTPN22Q9Y2R2 MIR4508-201ENST00000584178 70 ntBASIC28.77■■■□□ 2.2
PTPN22Q9Y2R2 RAP2CP1-202ENST00000605179 643 ntBASIC28.77■■■□□ 2.2
PTPN22Q9Y2R2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC28.77■■■□□ 2.2
PTPN22Q9Y2R2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
PTPN22Q9Y2R2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC28.77■■■□□ 2.2
PTPN22Q9Y2R2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC28.77■■■□□ 2.2
PTPN22Q9Y2R2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
PTPN22Q9Y2R2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
PTPN22Q9Y2R2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
PTPN22Q9Y2R2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
PTPN22Q9Y2R2 AC093536.1-201ENST00000569153 554 ntBASIC28.76■■■□□ 2.19
PTPN22Q9Y2R2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC28.76■■■□□ 2.19
PTPN22Q9Y2R2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
PTPN22Q9Y2R2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC28.75■■■□□ 2.19
PTPN22Q9Y2R2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
PTPN22Q9Y2R2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC28.75■■■□□ 2.19
PTPN22Q9Y2R2 HYI-210ENST00000486909 905 ntTSL 5 BASIC28.75■■■□□ 2.19
PTPN22Q9Y2R2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC28.75■■■□□ 2.19
PTPN22Q9Y2R2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
PTPN22Q9Y2R2 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
PTPN22Q9Y2R2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC28.74■■■□□ 2.19
PTPN22Q9Y2R2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
PTPN22Q9Y2R2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
PTPN22Q9Y2R2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC28.73■■■□□ 2.19
PTPN22Q9Y2R2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC28.73■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms