Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NF1P21359 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NF1P21359 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.75■□□□□ 0.91
NF1P21359 AC139795.1-202ENST00000500444 432 ntBASIC20.75■□□□□ 0.91
NF1P21359 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
NF1P21359 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NF1P21359 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.75■□□□□ 0.91
NF1P21359 RAP2CP1-202ENST00000605179 643 ntBASIC20.75■□□□□ 0.91
NF1P21359 AL031848.2-201ENST00000607670 837 ntBASIC20.74■□□□□ 0.91
NF1P21359 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.74■□□□□ 0.91
NF1P21359 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NF1P21359 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NF1P21359 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.73■□□□□ 0.91
NF1P21359 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NF1P21359 AL161658.1-201ENST00000623641 1967 ntBASIC20.73■□□□□ 0.91
NF1P21359 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.73■□□□□ 0.91
NF1P21359 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.72■□□□□ 0.91
NF1P21359 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NF1P21359 PVT1_1.1-201ENST00000615125 194 ntBASIC20.72■□□□□ 0.91
NF1P21359 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
NF1P21359 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.71■□□□□ 0.91
NF1P21359 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.71■□□□□ 0.91
NF1P21359 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
NF1P21359 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
NF1P21359 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.71■□□□□ 0.91
NF1P21359 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.7■□□□□ 0.9
NF1P21359 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.7■□□□□ 0.9
NF1P21359 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
NF1P21359 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NF1P21359 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NF1P21359 AC005837.3-201ENST00000612163 286 ntBASIC20.69■□□□□ 0.9
NF1P21359 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NF1P21359 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NF1P21359 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.68■□□□□ 0.9
NF1P21359 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.68■□□□□ 0.9
NF1P21359 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.68■□□□□ 0.9
NF1P21359 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NF1P21359 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NF1P21359 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
NF1P21359 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.67■□□□□ 0.9
NF1P21359 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NF1P21359 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NF1P21359 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NF1P21359 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.66■□□□□ 0.9
NF1P21359 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NF1P21359 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NF1P21359 AC120057.4-201ENST00000624722 1615 ntBASIC20.66■□□□□ 0.9
NF1P21359 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NF1P21359 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.66■□□□□ 0.9
NF1P21359 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.66■□□□□ 0.9
NF1P21359 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NF1P21359 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
NF1P21359 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.65■□□□□ 0.9
NF1P21359 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.65■□□□□ 0.9
NF1P21359 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NF1P21359 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.65■□□□□ 0.9
NF1P21359 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NF1P21359 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NF1P21359 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.64■□□□□ 0.89
NF1P21359 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.64■□□□□ 0.89
NF1P21359 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.64■□□□□ 0.89
NF1P21359 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NF1P21359 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NF1P21359 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NF1P21359 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NF1P21359 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.63■□□□□ 0.89
NF1P21359 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NF1P21359 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NF1P21359 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.62■□□□□ 0.89
NF1P21359 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.62■□□□□ 0.89
NF1P21359 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NF1P21359 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NF1P21359 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NF1P21359 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.61■□□□□ 0.89
NF1P21359 AC110285.6-201ENST00000617652 491 ntBASIC20.61■□□□□ 0.89
NF1P21359 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NF1P21359 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.61■□□□□ 0.89
NF1P21359 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.6■□□□□ 0.89
NF1P21359 AC131281.2-201ENST00000520478 145 ntBASIC20.6■□□□□ 0.89
NF1P21359 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.6■□□□□ 0.89
NF1P21359 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.6■□□□□ 0.89
NF1P21359 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NF1P21359 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NF1P21359 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NF1P21359 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
NF1P21359 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NF1P21359 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.59■□□□□ 0.89
NF1P21359 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
NF1P21359 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.59■□□□□ 0.89
NF1P21359 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.59■□□□□ 0.89
NF1P21359 AC110285.7-201ENST00000624417 1536 ntBASIC20.59■□□□□ 0.89
NF1P21359 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NF1P21359 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NF1P21359 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NF1P21359 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NF1P21359 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
NF1P21359 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NF1P21359 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
NF1P21359 ZNRF2P3-201ENST00000424200 374 ntBASIC20.58■□□□□ 0.89
NF1P21359 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms