Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 ERGIC3-208ENST00000442139 472 ntTSL 311.63□□□□□ -0.553e-8■■□□□ 12
LARP4Q71RC2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.244e-7■■□□□ 12
LARP4Q71RC2 SUN1-222ENST00000457861 2975 ntTSL 216.01■□□□□ 0.154e-7■■□□□ 12
LARP4Q71RC2 GET4-206ENST00000464468 676 ntTSL 316■□□□□ 0.154e-7■■□□□ 12
LARP4Q71RC2 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.234e-7■■□□□ 12
LARP4Q71RC2 RPL27A-208ENST00000530913 805 ntTSL 2 BASIC11.07□□□□□ -0.643e-19■■□□□ 12
LARP4Q71RC2 TBCB-208ENST00000588385 776 ntTSL 1 (best)20.12■□□□□ 0.811e-10■■□□□ 12
LARP4Q71RC2 LAMB2-217ENST00000498377 1021 ntTSL 215.76■□□□□ 0.114e-8■■□□□ 12
LARP4Q71RC2 TBCB-206ENST00000585910 656 ntTSL 214.75□□□□□ -0.051e-10■■□□□ 12
LARP4Q71RC2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.113e-11■■□□□ 12
LARP4Q71RC2 SNRNP70-204ENST00000595231 1673 ntTSL 1 (best)21.25■□□□□ 0.992e-7■■□□□ 12
LARP4Q71RC2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.18■□□□□ 0.982e-7■■□□□ 12
LARP4Q71RC2 SNRNP70-209ENST00000601065 1757 ntTSL 321.14■□□□□ 0.972e-7■■□□□ 12
LARP4Q71RC2 SNRNP70-202ENST00000401730 3144 ntTSL 217■□□□□ 0.312e-7■■□□□ 12
LARP4Q71RC2 SNRNP70-203ENST00000544278 3221 ntTSL 1 (best)15.68■□□□□ 0.12e-7■■□□□ 12
LARP4Q71RC2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.37■□□□□ 0.213e-11■■□□□ 12
LARP4Q71RC2 ILVBL-202ENST00000524779 771 ntTSL 216.87■□□□□ 0.296e-8■■□□□ 12
LARP4Q71RC2 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.35e-15■■□□□ 12
LARP4Q71RC2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.08■□□□□ 0.161e-7■■□□□ 12
LARP4Q71RC2 AL133352.1-202ENST00000527595 1423 ntAPPRIS ALT2 TSL 215.51■□□□□ 0.071e-7■■□□□ 12
LARP4Q71RC2 AL133352.1-201ENST00000529568 1952 ntAPPRIS ALT2 TSL 215.38■□□□□ 0.051e-7■■□□□ 12
LARP4Q71RC2 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.41e-7■■□□□ 12
LARP4Q71RC2 NDUFB8-203ENST00000370322 713 ntTSL 2 BASIC11.77□□□□□ -0.531e-7■■□□□ 12
LARP4Q71RC2 AL133352.1-205ENST00000533549 582 ntAPPRIS ALT2 TSL 411.77□□□□□ -0.531e-7■■□□□ 12
LARP4Q71RC2 AL133352.1-204ENST00000528174 538 ntAPPRIS ALT2 TSL 39.15□□□□□ -0.941e-7■■□□□ 12
LARP4Q71RC2 RPS15A-209ENST00000573554 606 ntTSL 1 (best)15.24■□□□□ 0.037e-36■■□□□ 12
LARP4Q71RC2 RPL30-211ENST00000521726 1129 ntTSL 314.34□□□□□ -0.112e-16■■□□□ 12
LARP4Q71RC2 RPL30-213ENST00000523172 274 ntTSL 5 BASIC10.52□□□□□ -0.732e-16■■□□□ 12
LARP4Q71RC2 SLC9A3R1-204ENST00000581356 519 ntTSL 311.59□□□□□ -0.558e-9■■□□□ 12
LARP4Q71RC2 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.371e-6■■□□□ 12
LARP4Q71RC2 RPL36A-204ENST00000465340 2240 ntTSL 213.2□□□□□ -0.36e-12■■□□□ 12
LARP4Q71RC2 RPL36A-208ENST00000491851 547 ntTSL 25.03□□□□□ -1.66e-12■■□□□ 12
LARP4Q71RC2 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.012e-7■■□□□ 12
LARP4Q71RC2 RCC2-203ENST00000474892 783 ntTSL 313.04□□□□□ -0.322e-7■■□□□ 12
LARP4Q71RC2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.25■□□□□ 0.677e-7■■□□□ 12
LARP4Q71RC2 PTBP1-210ENST00000586944 4661 ntTSL 216.77■□□□□ 0.277e-7■■□□□ 12
LARP4Q71RC2 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.157e-7■■□□□ 12
LARP4Q71RC2 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.47■□□□□ 0.077e-7■■□□□ 12
LARP4Q71RC2 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.037e-7■■□□□ 12
LARP4Q71RC2 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.017e-7■■□□□ 12
LARP4Q71RC2 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.31□□□□□ -0.127e-7■■□□□ 12
LARP4Q71RC2 PTBP1-213ENST00000587191 357 ntTSL 510.75□□□□□ -0.697e-7■■□□□ 12
LARP4Q71RC2 MCRIP1-209ENST00000575090 752 ntTSL 320.59■□□□□ 0.894e-8■■□□□ 12
LARP4Q71RC2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.33■□□□□ 0.854e-8■■□□□ 12
LARP4Q71RC2 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -04e-53■■□□□ 12
LARP4Q71RC2 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -04e-53■■□□□ 12
LARP4Q71RC2 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.154e-53■■□□□ 12
LARP4Q71RC2 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.264e-53■■□□□ 12
LARP4Q71RC2 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC11.53□□□□□ -0.564e-53■■□□□ 12
LARP4Q71RC2 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC10.67□□□□□ -0.74e-53■■□□□ 12
LARP4Q71RC2 FDPS-215ENST00000490140 680 ntTSL 210.67□□□□□ -0.74e-53■■□□□ 12
LARP4Q71RC2 FDPS-217ENST00000492244 673 ntTSL 310.67□□□□□ -0.74e-53■■□□□ 12
LARP4Q71RC2 FDPS-214ENST00000489324 475 ntTSL 29.17□□□□□ -0.944e-53■■□□□ 12
LARP4Q71RC2 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.85□□□□□ -0.199e-7■■□□□ 12
LARP4Q71RC2 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC12.49□□□□□ -0.419e-7■■□□□ 12
LARP4Q71RC2 DPP3-215ENST00000541961 2676 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.439e-7■■□□□ 12
LARP4Q71RC2 DPP3-205ENST00000530165 2251 ntTSL 2 BASIC12.01□□□□□ -0.499e-7■■□□□ 12
LARP4Q71RC2 AP002748.4-201ENST00000419755 3547 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.889e-7■■□□□ 12
LARP4Q71RC2 DPP3-214ENST00000539085 391 ntTSL 27.14□□□□□ -1.279e-7■■□□□ 12
LARP4Q71RC2 COX4I1-205ENST00000563774 566 ntTSL 418.85■□□□□ 0.612e-8■■□□□ 12
LARP4Q71RC2 COX4I1-214ENST00000567266 546 ntTSL 418.33■□□□□ 0.522e-8■■□□□ 12
LARP4Q71RC2 COX4I1-213ENST00000567241 561 ntTSL 417.07■□□□□ 0.322e-8■■□□□ 12
LARP4Q71RC2 COX4I1-210ENST00000566115 471 ntTSL 314.41□□□□□ -0.12e-8■■□□□ 12
LARP4Q71RC2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.448e-8■■□□□ 12
LARP4Q71RC2 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.068e-8■■□□□ 12
LARP4Q71RC2 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC8.76□□□□□ -1.018e-8■■□□□ 12
LARP4Q71RC2 HNRNPK-201ENST00000351839 2652 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.098e-8■■□□□ 12
LARP4Q71RC2 HNRNPK-211ENST00000493362 868 ntTSL 26.91□□□□□ -1.38e-8■■□□□ 12
LARP4Q71RC2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.88■■□□□ 1.413e-7■■□□□ 12
LARP4Q71RC2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.23■□□□□ 0.993e-6■■□□□ 12
LARP4Q71RC2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.983e-7■■□□□ 12
LARP4Q71RC2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.983e-6■■□□□ 12
LARP4Q71RC2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.841e-7■■□□□ 12
LARP4Q71RC2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.95■□□□□ 0.463e-6■■□□□ 12
LARP4Q71RC2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.87■□□□□ 0.453e-6■■□□□ 12
LARP4Q71RC2 MXRA8-207ENST00000474033 1171 ntTSL 1 (best)12.44□□□□□ -0.423e-6■■□□□ 12
LARP4Q71RC2 SRP68-212ENST00000602720 2037 ntTSL 2 BASIC12.35□□□□□ -0.433e-7■■□□□ 12
LARP4Q71RC2 SRP68-203ENST00000542536 1714 ntTSL 211.74□□□□□ -0.533e-7■■□□□ 12
LARP4Q71RC2 SRP68-207ENST00000588643 2040 ntTSL 210.96□□□□□ -0.663e-7■■□□□ 12
LARP4Q71RC2 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.85□□□□□ -1.793e-6■■□□□ 11.9
LARP4Q71RC2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.065e-6■■□□□ 11.9
LARP4Q71RC2 SLC25A11-204ENST00000574710 2176 ntTSL 221.4■■□□□ 1.025e-6■■□□□ 11.9
LARP4Q71RC2 ATN1-202ENST00000396684 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.563e-6■■□□□ 11.9
LARP4Q71RC2 FOXP4-201ENST00000307972 3745 ntTSL 1 (best) BASIC11.73□□□□□ -0.531e-10■■□□□ 11.9
LARP4Q71RC2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.83■□□□□ 0.63e-6■■□□□ 11.9
LARP4Q71RC2 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.373e-6■■□□□ 11.9
LARP4Q71RC2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.35■□□□□ 0.213e-6■■□□□ 11.9
LARP4Q71RC2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.28■□□□□ 0.23e-6■■□□□ 11.9
LARP4Q71RC2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.28■□□□□ 0.23e-6■■□□□ 11.9
LARP4Q71RC2 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.99□□□□□ -0.173e-6■■□□□ 11.9
LARP4Q71RC2 TRAPPC3-205ENST00000462715 2428 ntTSL 211.18□□□□□ -0.623e-6■■□□□ 11.9
LARP4Q71RC2 CNPY2-210ENST00000551720 586 ntTSL 317.8■□□□□ 0.443e-12■■□□□ 11.9
LARP4Q71RC2 FABP1-203ENST00000472846 546 ntTSL 26.16□□□□□ -1.429e-22■■□□□ 11.9
LARP4Q71RC2 GSTO1-204ENST00000445155 829 ntTSL 220.25■□□□□ 0.833e-23■■□□□ 11.9
LARP4Q71RC2 GPX3-206ENST00000521632 1314 ntTSL 513.97□□□□□ -0.173e-9■■□□□ 11.9
LARP4Q71RC2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.5■■□□□ 1.191e-9■■□□□ 11.9
LARP4Q71RC2 FCGRT-208ENST00000595881 2681 ntTSL 219.97■□□□□ 0.791e-9■■□□□ 11.9
LARP4Q71RC2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.441e-9■■□□□ 11.9
LARP4Q71RC2 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.41e-9■■□□□ 11.9
LARP4Q71RC2 FCGRT-214ENST00000598927 1616 ntTSL 517.38■□□□□ 0.371e-9■■□□□ 11.9
Retrieved 100 of 15,922 protein–RNA pairs in 156.3 ms