RNA–Protein interactions for RNA: ENST00000573554.1

RPS15A-209, Transcript of ribosomal protein S15a, humanhuman

TSL 1 (best)

Gene RPS15A, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS15A-209ENST00000573554 NISCHQ9Y2I1 1504 aa41.57■■■■■ 4.25
RPS15A-209ENST00000573554 CCDC180Q9P1Z9 1646 aa37.1■■■■□ 3.53
RPS15A-209ENST00000573554 ABCC9O60706 1549 aa36.85■■■■□ 3.49
RPS15A-209ENST00000573554 RB1CC1Q8TDY2 1594 aa35.17■■■■□ 3.22
RPS15A-209ENST00000573554 NACADO15069 1562 aa35.02■■■■□ 3.2
RPS15A-209ENST00000573554 DCAF8L2P0C7V8 631 aa34.97■■■■□ 3.19
RPS15A-209ENST00000573554 MYO15BQ96JP2 1530 aa34.65■■■■□ 3.14
RPS15A-209ENST00000573554 ZCCHC6Q5VYS8 1495 aaKnown RBP34.51■■■■□ 3.11
RPS15A-209ENST00000573554 UNC13AQ9UPW8 1703 aa34.43■■■■□ 3.1
RPS15A-209ENST00000573554 PABPN1Q86U42 306 aaKnown RBP eCLIP34.39■■■■□ 3.1
RPS15A-209ENST00000573554 DNAJC5BQ9UF47 199 aa34.36■■■■□ 3.09
RPS15A-209ENST00000573554 DCAF1Q9Y4B6 1507 aa34.33■■■■□ 3.09
RPS15A-209ENST00000573554 BICRAQ9NZM4 1560 aa34.2■■■■□ 3.07
RPS15A-209ENST00000573554 SCRIBQ14160 1630 aa33.86■■■■□ 3.01
RPS15A-209ENST00000573554 SHROOM4Q9ULL8 1493 aa33.67■■■□□ 2.98
RPS15A-209ENST00000573554 EIF4G1Q04637 1599 aaKnown RBP33.3■■■□□ 2.92
RPS15A-209ENST00000573554 CC2D2AQ9P2K1 1620 aa33.29■■■□□ 2.92
RPS15A-209ENST00000573554 CECR2Q9BXF3 1484 aa33.14■■■□□ 2.9
RPS15A-209ENST00000573554 NCAPD3P42695 1498 aa32.36■■■□□ 2.77
RPS15A-209ENST00000573554 SMARCA4P51532 1647 aa32.34■■■□□ 2.77
RPS15A-209ENST00000573554 ATAD2BQ9ULI0 1458 aa32.31■■■□□ 2.76
RPS15A-209ENST00000573554 BAZ1AQ9NRL2 1556 aaPredicted RBP32.21■■■□□ 2.75
RPS15A-209ENST00000573554 SMARCA2P51531 1590 aa32.19■■■□□ 2.74
RPS15A-209ENST00000573554 HMGXB3Q12766 1538 aa32.1■■■□□ 2.73
RPS15A-209ENST00000573554 MROH2BQ7Z745 1585 aa32.06■■■□□ 2.72
RPS15A-209ENST00000573554 PEG3Q9GZU2 1588 aa32.02■■■□□ 2.72
RPS15A-209ENST00000573554 BAZ1BQ9UIG0 1483 aaKnown RBP31.97■■■□□ 2.71
RPS15A-209ENST00000573554 NESP48681 1621 aa31.77■■■□□ 2.68
RPS15A-209ENST00000573554 ERCC6Q03468 1493 aa31.73■■■□□ 2.67
RPS15A-209ENST00000573554 WIZO95785 1651 aa31.69■■■□□ 2.66
RPS15A-209ENST00000573554 CUX2O14529 1486 aa31.57■■■□□ 2.64
RPS15A-209ENST00000573554 LAMC3Q9Y6N6 1575 aa31.54■■■□□ 2.64
RPS15A-209ENST00000573554 RSF1Q96T23 1441 aaPredicted RBP31.51■■■□□ 2.64
RPS15A-209ENST00000573554 CADPSQ9ULU8 1353 aa31.39■■■□□ 2.62
RPS15A-209ENST00000573554 PDS5BQ9NTI5 1447 aa31.35■■■□□ 2.61
RPS15A-209ENST00000573554 THOC2Q8NI27 1593 aaKnown RBP31.34■■■□□ 2.61
RPS15A-209ENST00000573554 KIF21AQ7Z4S6 1674 aa31.33■■■□□ 2.61
RPS15A-209ENST00000573554 TOP2AP11388 1531 aaKnown RBP31.27■■■□□ 2.6
RPS15A-209ENST00000573554 DNAJC5Q9H3Z4 198 aa31.25■■■□□ 2.59
RPS15A-209ENST00000573554 CFTRP13569 1480 aa31.1■■■□□ 2.57
RPS15A-209ENST00000573554 MRC2Q9UBG0 1479 aa31.06■■■□□ 2.56
RPS15A-209ENST00000573554 FANCD2Q9BXW9 1451 aa31.01■■■□□ 2.56
RPS15A-209ENST00000573554 CEP164Q9UPV0 1460 aa31■■■□□ 2.55
RPS15A-209ENST00000573554 WDR62O43379 1518 aa30.98■■■□□ 2.55
RPS15A-209ENST00000573554 CCDC88BA6NC98 1476 aa30.95■■■□□ 2.55
RPS15A-209ENST00000573554 PRDM2Q13029 1718 aa30.78■■■□□ 2.52
RPS15A-209ENST00000573554 URB2Q14146 1524 aaKnown RBP30.77■■■□□ 2.52
RPS15A-209ENST00000573554 TOPBP1Q92547 1522 aa30.48■■■□□ 2.47
RPS15A-209ENST00000573554 ABCC8Q09428 1581 aa30.4■■■□□ 2.46
RPS15A-209ENST00000573554 SUPT5HO00267 1087 aaKnown RBP30.38■■■□□ 2.45
RPS15A-209ENST00000573554 IFT140Q96RY7 1462 aa30.38■■■□□ 2.45
RPS15A-209ENST00000573554 DNMBPQ6XZF7 1577 aa30.37■■■□□ 2.45
RPS15A-209ENST00000573554 ZNF608Q9ULD9 1512 aaPredicted RBP30.34■■■□□ 2.45
RPS15A-209ENST00000573554 OSCARQ8IYS5 282 aa30.24■■■□□ 2.43
RPS15A-209ENST00000573554 TARBP1Q13395 1621 aaKnown RBP30.19■■■□□ 2.42
RPS15A-209ENST00000573554 POLA1P09884 1462 aaPredicted RBP30.19■■■□□ 2.42
RPS15A-209ENST00000573554 EIF4G3O43432 1585 aaKnown RBP30.15■■■□□ 2.42
RPS15A-209ENST00000573554 AQRO60306 1485 aaKnown RBP eCLIP30.12■■■□□ 2.411e-9■■■■■ 38.9
RPS15A-209ENST00000573554 RAD54L2Q9Y4B4 1467 aa30.1■■■□□ 2.41
RPS15A-209ENST00000573554 CUX1P39880 1505 aa30.08■■■□□ 2.41
RPS15A-209ENST00000573554 SOGA1O94964 1423 aa30.07■■■□□ 2.4
RPS15A-209ENST00000573554 FGD5Q6ZNL6 1462 aa30.05■■■□□ 2.4
RPS15A-209ENST00000573554 TRIM41Q8WV44 630 aa29.99■■■□□ 2.39
RPS15A-209ENST00000573554 TDRD9Q8NDG6 1382 aaKnown RBP29.98■■■□□ 2.39
RPS15A-209ENST00000573554 CHD1O14646 1710 aa29.87■■■□□ 2.37
RPS15A-209ENST00000573554 WDR97A6NE52 1622 aa29.84■■■□□ 2.37
RPS15A-209ENST00000573554 FBLN2P98095 1184 aa29.83■■■□□ 2.37
RPS15A-209ENST00000573554 RIMBP3CA6NJZ7 1639 aa29.79■■■□□ 2.36
RPS15A-209ENST00000573554 RIMBP3BA6NNM3 1639 aa29.79■■■□□ 2.36
RPS15A-209ENST00000573554 RIMBP3Q9UFD9 1639 aa29.79■■■□□ 2.36
RPS15A-209ENST00000573554 SNAPC4Q5SXM2 1469 aa29.78■■■□□ 2.36
RPS15A-209ENST00000573554 GRIN2BQ13224 1484 aa29.74■■■□□ 2.35
RPS15A-209ENST00000573554 ARHGEF11O15085 1522 aa29.72■■■□□ 2.35
RPS15A-209ENST00000573554 ABCA10Q8WWZ4 1543 aa29.72■■■□□ 2.35
RPS15A-209ENST00000573554 MAGI1Q96QZ7 1491 aaPredicted RBP29.7■■■□□ 2.35
RPS15A-209ENST00000573554 GAPVD1Q14C86 1478 aa29.69■■■□□ 2.34
RPS15A-209ENST00000573554 WRNQ14191 1432 aaPredicted RBP eCLIP29.69■■■□□ 2.344e-9■■□□□ 14.2
RPS15A-209ENST00000573554 TOP2BQ02880 1626 aa29.67■■■□□ 2.34
RPS15A-209ENST00000573554 BIVM-ERCC5R4GMW8 1640 aa29.67■■■□□ 2.34
RPS15A-209ENST00000573554 SYNJ1O43426 1573 aa29.66■■■□□ 2.34
RPS15A-209ENST00000573554 CHMP7Q8WUX9 453 aaPredicted RBP29.66■■■□□ 2.34
RPS15A-209ENST00000573554 ABCA5Q8WWZ7 1642 aa29.64■■■□□ 2.34
RPS15A-209ENST00000573554 PBRM1Q86U86 1689 aa29.64■■■□□ 2.34
RPS15A-209ENST00000573554 SYNJ2O15056 1496 aa29.61■■■□□ 2.33
RPS15A-209ENST00000573554 CLASP1Q7Z460 1538 aa29.54■■■□□ 2.32
RPS15A-209ENST00000573554 CYB5RLQ6IPT4 315 aa29.53■■■□□ 2.32
RPS15A-209ENST00000573554 ARAP1Q96P48 1450 aa29.47■■■□□ 2.31
RPS15A-209ENST00000573554 ADAMTS12P58397 1594 aa29.38■■■□□ 2.29
RPS15A-209ENST00000573554 GRIN2AQ12879 1464 aa29.36■■■□□ 2.29
RPS15A-209ENST00000573554 ERICH3Q5RHP9 1530 aa29.34■■■□□ 2.29
RPS15A-209ENST00000573554 FHAD1B1AJZ9 1412 aa29.32■■■□□ 2.28
RPS15A-209ENST00000573554 NUP160Q12769 1436 aa29.27■■■□□ 2.28
RPS15A-209ENST00000573554 CEP170Q5SW79 1584 aa29.26■■■□□ 2.28
RPS15A-209ENST00000573554 ERCC6L2Q5T890 1561 aa29.15■■■□□ 2.26
RPS15A-209ENST00000573554 IGF1RP08069 1367 aa29.1■■■□□ 2.25
RPS15A-209ENST00000573554 SHROOM2Q13796 1616 aa29.09■■■□□ 2.25
RPS15A-209ENST00000573554 KIF27Q86VH2 1401 aa29.09■■■□□ 2.25
RPS15A-209ENST00000573554 TRHP20396 242 aaPredicted RBP29.05■■■□□ 2.24
RPS15A-209ENST00000573554 JPH4Q96JJ6 628 aa29■■■□□ 2.23
RPS15A-209ENST00000573554 RUSC2Q8N2Y8 1516 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms