RNA–Protein interactions for RNA: ENST00000563774.1

COX4I1-205, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 4

Gene COX4I1, Length 566 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-205ENST00000563774 NISCHQ9Y2I1 1504 aa48.93■■■■■ 5.42
COX4I1-205ENST00000563774 CCDC180Q9P1Z9 1646 aa43.54■■■■■ 4.56
COX4I1-205ENST00000563774 ABCC9O60706 1549 aa42.15■■■■■ 4.34
COX4I1-205ENST00000563774 NACADO15069 1562 aa40.86■■■■■ 4.13
COX4I1-205ENST00000563774 RB1CC1Q8TDY2 1594 aa40.83■■■■■ 4.13
COX4I1-205ENST00000563774 ZCCHC6Q5VYS8 1495 aaKnown RBP40.82■■■■■ 4.12
COX4I1-205ENST00000563774 MYO15BQ96JP2 1530 aa40.76■■■■■ 4.12
COX4I1-205ENST00000563774 DCAF1Q9Y4B6 1507 aa40.63■■■■■ 4.1
COX4I1-205ENST00000563774 DCAF8L2P0C7V8 631 aa40.62■■■■■ 4.09
COX4I1-205ENST00000563774 UNC13AQ9UPW8 1703 aa39.83■■■■□ 3.97
COX4I1-205ENST00000563774 SCRIBQ14160 1630 aa39.54■■■■□ 3.92
COX4I1-205ENST00000563774 BICRAQ9NZM4 1560 aa39.47■■■■□ 3.91
COX4I1-205ENST00000563774 PABPN1Q86U42 306 aaKnown RBP eCLIP39.35■■■■□ 3.89
COX4I1-205ENST00000563774 SHROOM4Q9ULL8 1493 aa39.33■■■■□ 3.89
COX4I1-205ENST00000563774 EIF4G1Q04637 1599 aaKnown RBP38.45■■■■□ 3.75
COX4I1-205ENST00000563774 DNAJC5BQ9UF47 199 aa38.39■■■■□ 3.74
COX4I1-205ENST00000563774 CC2D2AQ9P2K1 1620 aa38.22■■■■□ 3.71
COX4I1-205ENST00000563774 BAZ1AQ9NRL2 1556 aaPredicted RBP37.97■■■■□ 3.67
COX4I1-205ENST00000563774 CECR2Q9BXF3 1484 aa37.97■■■■□ 3.67
COX4I1-205ENST00000563774 SMARCA4P51532 1647 aa37.93■■■■□ 3.66
COX4I1-205ENST00000563774 SMARCA2P51531 1590 aa37.71■■■■□ 3.63
COX4I1-205ENST00000563774 NCAPD3P42695 1498 aa37.65■■■■□ 3.62
COX4I1-205ENST00000563774 ATAD2BQ9ULI0 1458 aa37.64■■■■□ 3.62
COX4I1-205ENST00000563774 MROH2BQ7Z745 1585 aa37.63■■■■□ 3.62
COX4I1-205ENST00000563774 PEG3Q9GZU2 1588 aa37.63■■■■□ 3.62
COX4I1-205ENST00000563774 HMGXB3Q12766 1538 aa37.52■■■■□ 3.6
COX4I1-205ENST00000563774 BAZ1BQ9UIG0 1483 aaKnown RBP37.37■■■■□ 3.57
COX4I1-205ENST00000563774 RSF1Q96T23 1441 aaPredicted RBP37.31■■■■□ 3.56
COX4I1-205ENST00000563774 WIZO95785 1651 aa37.25■■■■□ 3.55
COX4I1-205ENST00000563774 TOP2AP11388 1531 aaKnown RBP36.96■■■■□ 3.51
COX4I1-205ENST00000563774 LAMC3Q9Y6N6 1575 aa36.66■■■■□ 3.46
COX4I1-205ENST00000563774 CADPSQ9ULU8 1353 aa36.53■■■■□ 3.44
COX4I1-205ENST00000563774 NESP48681 1621 aa36.52■■■■□ 3.44
COX4I1-205ENST00000563774 CCDC88BA6NC98 1476 aa36.44■■■■□ 3.42
COX4I1-205ENST00000563774 SUPT5HO00267 1087 aaKnown RBP36.41■■■■□ 3.42
COX4I1-205ENST00000563774 ERCC6Q03468 1493 aa36.41■■■■□ 3.42
COX4I1-205ENST00000563774 PDS5BQ9NTI5 1447 aa36.39■■■■□ 3.42
COX4I1-205ENST00000563774 CFTRP13569 1480 aa36.37■■■■□ 3.41
COX4I1-205ENST00000563774 PRDM2Q13029 1718 aa36.22■■■■□ 3.39
COX4I1-205ENST00000563774 KIF21AQ7Z4S6 1674 aa36.18■■■■□ 3.38
COX4I1-205ENST00000563774 FANCD2Q9BXW9 1451 aa36.1■■■■□ 3.37
COX4I1-205ENST00000563774 CEP164Q9UPV0 1460 aa36.06■■■■□ 3.36
COX4I1-205ENST00000563774 CUX2O14529 1486 aa36.04■■■■□ 3.36
COX4I1-205ENST00000563774 THOC2Q8NI27 1593 aaKnown RBP36.03■■■■□ 3.36
COX4I1-205ENST00000563774 MRC2Q9UBG0 1479 aa35.96■■■■□ 3.35
COX4I1-205ENST00000563774 WDR62O43379 1518 aa35.85■■■■□ 3.33
COX4I1-205ENST00000563774 ABCC8Q09428 1581 aa35.7■■■■□ 3.31
COX4I1-205ENST00000563774 URB2Q14146 1524 aaKnown RBP35.67■■■■□ 3.3
COX4I1-205ENST00000563774 DNMBPQ6XZF7 1577 aa35.57■■■■□ 3.28
COX4I1-205ENST00000563774 TOPBP1Q92547 1522 aa35.54■■■■□ 3.28
COX4I1-205ENST00000563774 IFT140Q96RY7 1462 aa35.33■■■■□ 3.25
COX4I1-205ENST00000563774 CUX1P39880 1505 aa35.32■■■■□ 3.24
COX4I1-205ENST00000563774 POLA1P09884 1462 aaPredicted RBP35.24■■■■□ 3.23
COX4I1-205ENST00000563774 WRNQ14191 1432 aaPredicted RBP eCLIP35.22■■■■□ 3.231e-6■□□□□ 10.2
COX4I1-205ENST00000563774 FGD5Q6ZNL6 1462 aa35.18■■■■□ 3.22
COX4I1-205ENST00000563774 BIVM-ERCC5R4GMW8 1640 aa35.16■■■■□ 3.22
COX4I1-205ENST00000563774 TOP2BQ02880 1626 aa35.15■■■■□ 3.22
COX4I1-205ENST00000563774 TARBP1Q13395 1621 aaKnown RBP35.14■■■■□ 3.22
COX4I1-205ENST00000563774 SOGA1O94964 1423 aa35.11■■■■□ 3.21
COX4I1-205ENST00000563774 WDR97A6NE52 1622 aa35.06■■■■□ 3.2
COX4I1-205ENST00000563774 SYNJ1O43426 1573 aa35.06■■■■□ 3.2
COX4I1-205ENST00000563774 RAD54L2Q9Y4B4 1467 aa35.01■■■■□ 3.19
COX4I1-205ENST00000563774 ZNF608Q9ULD9 1512 aaPredicted RBP35■■■■□ 3.19
COX4I1-205ENST00000563774 EIF4G3O43432 1585 aaKnown RBP34.97■■■■□ 3.19
COX4I1-205ENST00000563774 ABCA10Q8WWZ4 1543 aa34.91■■■■□ 3.18
COX4I1-205ENST00000563774 AQRO60306 1485 aaKnown RBP eCLIP34.84■■■■□ 3.178e-18■■■■■ 42.4
COX4I1-205ENST00000563774 TDRD9Q8NDG6 1382 aaKnown RBP34.81■■■■□ 3.16
COX4I1-205ENST00000563774 ABCA5Q8WWZ7 1642 aa34.74■■■■□ 3.15
COX4I1-205ENST00000563774 GRIN2BQ13224 1484 aa34.72■■■■□ 3.15
COX4I1-205ENST00000563774 GAPVD1Q14C86 1478 aa34.72■■■■□ 3.15
COX4I1-205ENST00000563774 PBRM1Q86U86 1689 aa34.66■■■■□ 3.14
COX4I1-205ENST00000563774 MAGI1Q96QZ7 1491 aaPredicted RBP34.65■■■■□ 3.14
COX4I1-205ENST00000563774 SNAPC4Q5SXM2 1469 aa34.58■■■■□ 3.13
COX4I1-205ENST00000563774 DNAJC5Q9H3Z4 198 aa34.57■■■■□ 3.12
COX4I1-205ENST00000563774 ERICH3Q5RHP9 1530 aa34.55■■■■□ 3.12
COX4I1-205ENST00000563774 OSCARQ8IYS5 282 aa34.51■■■■□ 3.12
COX4I1-205ENST00000563774 KIF27Q86VH2 1401 aa34.5■■■■□ 3.11
COX4I1-205ENST00000563774 CHD1O14646 1710 aa34.48■■■■□ 3.11
COX4I1-205ENST00000563774 TRIM41Q8WV44 630 aa34.48■■■■□ 3.11
COX4I1-205ENST00000563774 SYNJ2O15056 1496 aa34.47■■■■□ 3.11
COX4I1-205ENST00000563774 CHMP7Q8WUX9 453 aaPredicted RBP34.39■■■■□ 3.1
COX4I1-205ENST00000563774 ADAMTS12P58397 1594 aa34.39■■■■□ 3.1
COX4I1-205ENST00000563774 FHAD1B1AJZ9 1412 aa34.37■■■■□ 3.09
COX4I1-205ENST00000563774 FBLN2P98095 1184 aa34.36■■■■□ 3.09
COX4I1-205ENST00000563774 CUL7Q14999 1698 aa34.29■■■■□ 3.08
COX4I1-205ENST00000563774 IGF1RP08069 1367 aa34.26■■■■□ 3.08
COX4I1-205ENST00000563774 GRIN2AQ12879 1464 aa34.25■■■■□ 3.07
COX4I1-205ENST00000563774 CHIC1Q5VXU3 224 aa34.15■■■■□ 3.06
COX4I1-205ENST00000563774 CLASP1Q7Z460 1538 aa34.13■■■■□ 3.05
COX4I1-205ENST00000563774 NUP160Q12769 1436 aa34.11■■■■□ 3.05
COX4I1-205ENST00000563774 CARMIL1Q5VZK9 1371 aa34.09■■■■□ 3.05
COX4I1-205ENST00000563774 EEA1Q15075 1411 aa34.07■■■■□ 3.04
COX4I1-205ENST00000563774 RUSC2Q8N2Y8 1516 aa34.06■■■■□ 3.04
COX4I1-205ENST00000563774 CEP170Q5SW79 1584 aa34.02■■■■□ 3.04
COX4I1-205ENST00000563774 RAPGEF2Q9Y4G8 1499 aa33.95■■■■□ 3.02
COX4I1-205ENST00000563774 ARHGEF11O15085 1522 aa33.93■■■■□ 3.02
COX4I1-205ENST00000563774 RIMBP3CA6NJZ7 1639 aa33.9■■■■□ 3.02
COX4I1-205ENST00000563774 RIMBP3BA6NNM3 1639 aa33.9■■■■□ 3.02
COX4I1-205ENST00000563774 RIMBP3Q9UFD9 1639 aa33.9■■■■□ 3.02
COX4I1-205ENST00000563774 PRXQ9BXM0 1461 aa33.87■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms