RNA–Protein interactions for RNA: ENST00000588643.1

SRP68-207, Transcript of signal recognition particle 68, humanhuman

TSL 2

Gene SRP68, Length 2,040 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP68-207ENST00000588643 NISCHQ9Y2I1 1504 aa21.92■■□□□ 1.1
SRP68-207ENST00000588643 CCDC180Q9P1Z9 1646 aa19.31■□□□□ 0.68
SRP68-207ENST00000588643 ABCC9O60706 1549 aa19.07■□□□□ 0.64
SRP68-207ENST00000588643 ZCCHC6Q5VYS8 1495 aaKnown RBP18.61■□□□□ 0.57
SRP68-207ENST00000588643 SHROOM4Q9ULL8 1493 aa18.56■□□□□ 0.56
SRP68-207ENST00000588643 DCAF8L2P0C7V8 631 aa18.5■□□□□ 0.55
SRP68-207ENST00000588643 SUPT5HO00267 1087 aaKnown RBP18.39■□□□□ 0.53
SRP68-207ENST00000588643 RB1CC1Q8TDY2 1594 aa18.19■□□□□ 0.5
SRP68-207ENST00000588643 DCAF1Q9Y4B6 1507 aa18.15■□□□□ 0.5
SRP68-207ENST00000588643 NACADO15069 1562 aa18.12■□□□□ 0.49
SRP68-207ENST00000588643 CHIC1Q5VXU3 224 aa18.1■□□□□ 0.49
SRP68-207ENST00000588643 HRCP23327 699 aa18.03■□□□□ 0.48
SRP68-207ENST00000588643 MYO15BQ96JP2 1530 aa17.99■□□□□ 0.47
SRP68-207ENST00000588643 UNC13AQ9UPW8 1703 aa17.95■□□□□ 0.46
SRP68-207ENST00000588643 PABPN1Q86U42 306 aaKnown RBP eCLIP17.88■□□□□ 0.45
SRP68-207ENST00000588643 SCRIBQ14160 1630 aa17.84■□□□□ 0.45
SRP68-207ENST00000588643 PCGF6Q9BYE7 350 aa17.72■□□□□ 0.43
SRP68-207ENST00000588643 BICRAQ9NZM4 1560 aa17.69■□□□□ 0.42
SRP68-207ENST00000588643 TRIM26Q12899 539 aaPredicted RBP17.51■□□□□ 0.39
SRP68-207ENST00000588643 DNAJC5BQ9UF47 199 aa17.47■□□□□ 0.39
SRP68-207ENST00000588643 LOC105371045A0A1W2PR82 267 aa17.43■□□□□ 0.38
SRP68-207ENST00000588643 ZEB1P37275 1124 aaPredicted RBP17.4■□□□□ 0.38
SRP68-207ENST00000588643 RSF1Q96T23 1441 aaPredicted RBP17.39■□□□□ 0.37
SRP68-207ENST00000588643 PPARGC1BQ86YN6 1023 aaKnown RBP17.34■□□□□ 0.37
SRP68-207ENST00000588643 TRIM41Q8WV44 630 aa17.25■□□□□ 0.35
SRP68-207ENST00000588643 EIF4G1Q04637 1599 aaKnown RBP17.23■□□□□ 0.35
SRP68-207ENST00000588643 CC2D2AQ9P2K1 1620 aa17.2■□□□□ 0.34
SRP68-207ENST00000588643 CECR2Q9BXF3 1484 aa17.1■□□□□ 0.33
SRP68-207ENST00000588643 PELP1Q8IZL8 1130 aaKnown RBP17■□□□□ 0.31
SRP68-207ENST00000588643 SMARCA4P51532 1647 aa16.95■□□□□ 0.3
SRP68-207ENST00000588643 MROH2BQ7Z745 1585 aa16.95■□□□□ 0.3
SRP68-207ENST00000588643 BAZ1AQ9NRL2 1556 aaPredicted RBP16.92■□□□□ 0.3
SRP68-207ENST00000588643 FAM9AQ8IZU1 332 aaPredicted RBP16.92■□□□□ 0.3
SRP68-207ENST00000588643 WIZO95785 1651 aa16.87■□□□□ 0.29
SRP68-207ENST00000588643 ATAD2BQ9ULI0 1458 aa16.81■□□□□ 0.28
SRP68-207ENST00000588643 SMARCA2P51531 1590 aa16.75■□□□□ 0.27
SRP68-207ENST00000588643 TOP2AP11388 1531 aaKnown RBP16.75■□□□□ 0.27
SRP68-207ENST00000588643 WRNQ14191 1432 aaPredicted RBP eCLIP16.74■□□□□ 0.27
SRP68-207ENST00000588643 NCAPD3P42695 1498 aa16.72■□□□□ 0.27
SRP68-207ENST00000588643 BAZ1BQ9UIG0 1483 aaKnown RBP16.72■□□□□ 0.27
SRP68-207ENST00000588643 EEA1Q15075 1411 aa16.69■□□□□ 0.26
SRP68-207ENST00000588643 PEG3Q9GZU2 1588 aa16.66■□□□□ 0.26
SRP68-207ENST00000588643 HMGXB3Q12766 1538 aa16.66■□□□□ 0.26
SRP68-207ENST00000588643 CCER1Q8TC90 406 aaPredicted RBP16.65■□□□□ 0.26
SRP68-207ENST00000588643 SCAF1Q9H7N4 1312 aaKnown RBP16.64■□□□□ 0.25
SRP68-207ENST00000588643 TNIKQ9UKE5 1360 aa16.62■□□□□ 0.25
SRP68-207ENST00000588643 EHMT2Q96KQ7 1210 aa16.62■□□□□ 0.25
SRP68-207ENST00000588643 CCDC88BA6NC98 1476 aa16.58■□□□□ 0.25
SRP68-207ENST00000588643 CEP162Q5TB80 1403 aa16.57■□□□□ 0.24
SRP68-207ENST00000588643 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.55■□□□□ 0.24
SRP68-207ENST00000588643 ACIN1Q9UKV3 1341 aaKnown RBP16.53■□□□□ 0.24
SRP68-207ENST00000588643 NESP48681 1621 aa16.53■□□□□ 0.24
SRP68-207ENST00000588643 CENPBP07199 599 aaPredicted RBP16.53■□□□□ 0.24
SRP68-207ENST00000588643 ABCC8Q09428 1581 aa16.52■□□□□ 0.24
SRP68-207ENST00000588643 DIEXFQ68CQ4 756 aaKnown RBP16.48■□□□□ 0.23
SRP68-207ENST00000588643 CSRNP3Q8WYN3 585 aa16.48■□□□□ 0.23
SRP68-207ENST00000588643 GOLGA3Q08378 1498 aa16.47■□□□□ 0.23
SRP68-207ENST00000588643 SOGA1O94964 1423 aa16.43■□□□□ 0.22
SRP68-207ENST00000588643 ERCC6Q03468 1493 aa16.4■□□□□ 0.22
SRP68-207ENST00000588643 CEP164Q9UPV0 1460 aa16.37■□□□□ 0.21
SRP68-207ENST00000588643 KIF21BO75037 1637 aa16.37■□□□□ 0.21
SRP68-207ENST00000588643 UBTFP17480 764 aaKnown RBP16.36■□□□□ 0.21
SRP68-207ENST00000588643 NEUROD1Q13562 356 aa16.36■□□□□ 0.21
SRP68-207ENST00000588643 ZNF316A6NFI3 1004 aaPredicted RBP16.35■□□□□ 0.21
SRP68-207ENST00000588643 KIF21AQ7Z4S6 1674 aa16.33■□□□□ 0.21
SRP68-207ENST00000588643 MYT1Q01538 1121 aa16.33■□□□□ 0.2
SRP68-207ENST00000588643 LAMC3Q9Y6N6 1575 aa16.31■□□□□ 0.2
SRP68-207ENST00000588643 CADPSQ9ULU8 1353 aa16.29■□□□□ 0.2
SRP68-207ENST00000588643 RUSC2Q8N2Y8 1516 aa16.29■□□□□ 0.2
SRP68-207ENST00000588643 GTF3C3Q9Y5Q9 886 aa16.26■□□□□ 0.19
SRP68-207ENST00000588643 VPS8Q8N3P4 1428 aa16.24■□□□□ 0.19
SRP68-207ENST00000588643 CLIP1P30622 1438 aa16.23■□□□□ 0.19
SRP68-207ENST00000588643 SYNJ1O43426 1573 aa16.2■□□□□ 0.18
SRP68-207ENST00000588643 PDS5BQ9NTI5 1447 aa16.2■□□□□ 0.18
SRP68-207ENST00000588643 TTBK1Q5TCY1 1321 aaPredicted RBP16.19■□□□□ 0.18
SRP68-207ENST00000588643 CFTRP13569 1480 aa16.19■□□□□ 0.18
SRP68-207ENST00000588643 APLP2Q06481 763 aa16.19■□□□□ 0.18
SRP68-207ENST00000588643 CLSPNQ9HAW4 1339 aa16.17■□□□□ 0.18
SRP68-207ENST00000588643 THOC2Q8NI27 1593 aaKnown RBP16.16■□□□□ 0.18
SRP68-207ENST00000588643 FANCD2Q9BXW9 1451 aa16.16■□□□□ 0.18
SRP68-207ENST00000588643 PRDM2Q13029 1718 aa16.14■□□□□ 0.17
SRP68-207ENST00000588643 TOP2BQ02880 1626 aa16.09■□□□□ 0.17
SRP68-207ENST00000588643 ERICH3Q5RHP9 1530 aa16.09■□□□□ 0.17
SRP68-207ENST00000588643 HNRNPUL2Q1KMD3 747 aaKnown RBP16.07■□□□□ 0.16
SRP68-207ENST00000588643 MRC2Q9UBG0 1479 aa16.06■□□□□ 0.16
SRP68-207ENST00000588643 RAPGEF2Q9Y4G8 1499 aa16.06■□□□□ 0.16
SRP68-207ENST00000588643 BIVM-ERCC5R4GMW8 1640 aa16.05■□□□□ 0.16
SRP68-207ENST00000588643 CUX2O14529 1486 aa16.04■□□□□ 0.16
SRP68-207ENST00000588643 URB2Q14146 1524 aaKnown RBP16.01■□□□□ 0.15
SRP68-207ENST00000588643 MIER1Q8N108 512 aa16.01■□□□□ 0.15
SRP68-207ENST00000588643 WDR62O43379 1518 aa15.99■□□□□ 0.15
SRP68-207ENST00000588643 PRXQ9BXM0 1461 aa15.98■□□□□ 0.15
SRP68-207ENST00000588643 YTHDC1Q96MU7 727 aaKnown RBP15.94■□□□□ 0.14
SRP68-207ENST00000588643 DHX57Q6P158 1386 aaKnown RBP15.92■□□□□ 0.14
SRP68-207ENST00000588643 RRBP1Q9P2E9 1410 aaKnown RBP15.91■□□□□ 0.14
SRP68-207ENST00000588643 ARAP1Q96P48 1450 aa15.91■□□□□ 0.14
SRP68-207ENST00000588643 TOPBP1Q92547 1522 aa15.9■□□□□ 0.14
SRP68-207ENST00000588643 KIF27Q86VH2 1401 aa15.88■□□□□ 0.13
SRP68-207ENST00000588643 DNMBPQ6XZF7 1577 aa15.86■□□□□ 0.13
SRP68-207ENST00000588643 CUX1P39880 1505 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms