RNA–Protein interactions for RNA: ENST00000407192.5

GET4-202, Transcript of golgi to ER traffic protein 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GET4, Length 4,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GET4-202ENST00000407192 NISCHQ9Y2I1 1504 aa26.26■■□□□ 1.79
GET4-202ENST00000407192 DCAF8L2P0C7V8 631 aa24.93■■□□□ 1.58
GET4-202ENST00000407192 SUPT5HO00267 1087 aaKnown RBP24.12■■□□□ 1.45
GET4-202ENST00000407192 SHROOM4Q9ULL8 1493 aa23.95■■□□□ 1.43
GET4-202ENST00000407192 EHMT2Q96KQ7 1210 aa23.19■■□□□ 1.3
GET4-202ENST00000407192 FAM9AQ8IZU1 332 aaPredicted RBP22.69■■□□□ 1.22
GET4-202ENST00000407192 PCGF6Q9BYE7 350 aa22.59■■□□□ 1.21
GET4-202ENST00000407192 CCDC180Q9P1Z9 1646 aa22.38■■□□□ 1.17
GET4-202ENST00000407192 TTBK1Q5TCY1 1321 aaPredicted RBP22.36■■□□□ 1.17
GET4-202ENST00000407192 TRIM41Q8WV44 630 aa22.17■■□□□ 1.14
GET4-202ENST00000407192 ABCC9O60706 1549 aa22.14■■□□□ 1.14
GET4-202ENST00000407192 RANGAP1P46060 587 aaPredicted RBP22.01■■□□□ 1.11
GET4-202ENST00000407192 APLP2Q06481 763 aa21.94■■□□□ 1.1
GET4-202ENST00000407192 PPARGC1BQ86YN6 1023 aaKnown RBP21.92■■□□□ 1.1
GET4-202ENST00000407192 LOC105371045A0A1W2PR82 267 aa21.91■■□□□ 1.1
GET4-202ENST00000407192 CHIC1Q5VXU3 224 aa21.9■■□□□ 1.1
GET4-202ENST00000407192 ZCCHC6Q5VYS8 1495 aaKnown RBP21.88■■□□□ 1.09
GET4-202ENST00000407192 CCER1Q8TC90 406 aaPredicted RBP21.73■■□□□ 1.07
GET4-202ENST00000407192 UBTFP17480 764 aaKnown RBP21.71■■□□□ 1.07
GET4-202ENST00000407192 HRCP23327 699 aa21.56■■□□□ 1.04
GET4-202ENST00000407192 ZEB1P37275 1124 aaPredicted RBP21.53■■□□□ 1.04
GET4-202ENST00000407192 TRIM26Q12899 539 aaPredicted RBP21.52■■□□□ 1.03
GET4-202ENST00000407192 ATP1B4Q9UN42 357 aaPredicted RBP21.46■■□□□ 1.03
GET4-202ENST00000407192 DCAF1Q9Y4B6 1507 aa21.37■■□□□ 1.01
GET4-202ENST00000407192 PABPN1Q86U42 306 aaKnown RBP eCLIP21.33■■□□□ 1.013e-7■■■■□ 19.6
GET4-202ENST00000407192 NACADO15069 1562 aa21.33■■□□□ 1.01
GET4-202ENST00000407192 PELP1Q8IZL8 1130 aaKnown RBP21.33■■□□□ 1
GET4-202ENST00000407192 RB1CC1Q8TDY2 1594 aa21.31■■□□□ 1
GET4-202ENST00000407192 YTHDC1Q96MU7 727 aaKnown RBP21.27■■□□□ 1
GET4-202ENST00000407192 CENPBP07199 599 aaPredicted RBP21.25■□□□□ 0.99
GET4-202ENST00000407192 SCRIBQ14160 1630 aa21.24■□□□□ 0.99
GET4-202ENST00000407192 HNRNPUL2Q1KMD3 747 aaKnown RBP21.12■□□□□ 0.97
GET4-202ENST00000407192 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.11■□□□□ 0.97
GET4-202ENST00000407192 ITGAEP38570 1179 aa21.09■□□□□ 0.97
GET4-202ENST00000407192 MYO15BQ96JP2 1530 aa21.03■□□□□ 0.96
GET4-202ENST00000407192 DIEXFQ68CQ4 756 aaKnown RBP20.69■□□□□ 0.9
GET4-202ENST00000407192 RSF1Q96T23 1441 aaPredicted RBP20.6■□□□□ 0.89
GET4-202ENST00000407192 ERICH6Q7L0X2 663 aa20.57■□□□□ 0.88
GET4-202ENST00000407192 NEFLP07196 543 aa20.56■□□□□ 0.88
GET4-202ENST00000407192 CNGB1Q14028 1251 aaPredicted RBP20.56■□□□□ 0.88
GET4-202ENST00000407192 BAZ1AQ9NRL2 1556 aaPredicted RBP20.51■□□□□ 0.87
GET4-202ENST00000407192 CSRNP3Q8WYN3 585 aa20.5■□□□□ 0.87
GET4-202ENST00000407192 POLR3GLQ9BT43 218 aa20.49■□□□□ 0.87
GET4-202ENST00000407192 FAM50AQ14320 339 aaKnown RBP20.47■□□□□ 0.87
GET4-202ENST00000407192 MYT1Q01538 1121 aa20.45■□□□□ 0.86
GET4-202ENST00000407192 CECR2Q9BXF3 1484 aa20.41■□□□□ 0.86
GET4-202ENST00000407192 NEUROD1Q13562 356 aa20.38■□□□□ 0.85
GET4-202ENST00000407192 P3H3Q8IVL6 736 aa20.34■□□□□ 0.85
GET4-202ENST00000407192 GTF3C3Q9Y5Q9 886 aa20.32■□□□□ 0.84
GET4-202ENST00000407192 BAZ1BQ9UIG0 1483 aaKnown RBP20.28■□□□□ 0.84
GET4-202ENST00000407192 ZNF316A6NFI3 1004 aaPredicted RBP20.24■□□□□ 0.83
GET4-202ENST00000407192 MROH2BQ7Z745 1585 aa20.23■□□□□ 0.83
GET4-202ENST00000407192 MYT1LQ9UL68 1186 aa20.2■□□□□ 0.82
GET4-202ENST00000407192 TRIM52Q96A61 297 aa20.18■□□□□ 0.82
GET4-202ENST00000407192 ARID3CA6NKF2 412 aa20.18■□□□□ 0.82
GET4-202ENST00000407192 BCANQ96GW7 911 aa20.12■□□□□ 0.81
GET4-202ENST00000407192 SMARCA2P51531 1590 aa20.12■□□□□ 0.81
GET4-202ENST00000407192 ACIN1Q9UKV3 1341 aaKnown RBP20.08■□□□□ 0.8
GET4-202ENST00000407192 FBLN2P98095 1184 aa20.03■□□□□ 0.8
GET4-202ENST00000407192 ZNF326Q5BKZ1 582 aaKnown RBP20.01■□□□□ 0.79
GET4-202ENST00000407192 SMARCA4P51532 1647 aa20.01■□□□□ 0.79
GET4-202ENST00000407192 TOP2AP11388 1531 aaKnown RBP19.95■□□□□ 0.78
GET4-202ENST00000407192 WIZO95785 1651 aa19.94■□□□□ 0.78
GET4-202ENST00000407192 ATAD2BQ9ULI0 1458 aa19.93■□□□□ 0.78
GET4-202ENST00000407192 CCDC88BA6NC98 1476 aa19.91■□□□□ 0.78
GET4-202ENST00000407192 ANP32CO43423 234 aa19.89■□□□□ 0.78
GET4-202ENST00000407192 WRNQ14191 1432 aaPredicted RBP eCLIP19.88■□□□□ 0.77
GET4-202ENST00000407192 SLC4A1APQ9BWU0 796 aaKnown RBP19.81■□□□□ 0.76
GET4-202ENST00000407192 EEA1Q15075 1411 aa19.81■□□□□ 0.76
GET4-202ENST00000407192 SCAF1Q9H7N4 1312 aaKnown RBP19.8■□□□□ 0.76
GET4-202ENST00000407192 DDX10Q13206 875 aaKnown RBP19.79■□□□□ 0.76
GET4-202ENST00000407192 CEP162Q5TB80 1403 aa19.79■□□□□ 0.76
GET4-202ENST00000407192 CLIP1P30622 1438 aa19.79■□□□□ 0.76
GET4-202ENST00000407192 ZNF777Q9ULD5 760 aaPredicted RBP19.79■□□□□ 0.76
GET4-202ENST00000407192 MIER1Q8N108 512 aa19.78■□□□□ 0.76
GET4-202ENST00000407192 HIRIP3Q9BW71 556 aaPredicted RBP19.76■□□□□ 0.75
GET4-202ENST00000407192 CHIC2Q9UKJ5 165 aa19.73■□□□□ 0.75
GET4-202ENST00000407192 EIF4G1Q04637 1599 aaKnown RBP19.71■□□□□ 0.75
GET4-202ENST00000407192 BICRAQ9NZM4 1560 aa19.71■□□□□ 0.75
GET4-202ENST00000407192 NCAPD3P42695 1498 aa19.7■□□□□ 0.74
GET4-202ENST00000407192 CADPSQ9ULU8 1353 aa19.64■□□□□ 0.74
GET4-202ENST00000407192 DAXXQ9UER7 740 aaPredicted RBP19.63■□□□□ 0.73
GET4-202ENST00000407192 SOGA1O94964 1423 aa19.62■□□□□ 0.73
GET4-202ENST00000407192 TONSLQ96HA7 1378 aa19.62■□□□□ 0.73
GET4-202ENST00000407192 KIF27Q86VH2 1401 aa19.61■□□□□ 0.73
GET4-202ENST00000407192 PDS5BQ9NTI5 1447 aa19.61■□□□□ 0.73
GET4-202ENST00000407192 FKBP8Q14318 412 aa19.59■□□□□ 0.73
GET4-202ENST00000407192 GOLGA3Q08378 1498 aa19.59■□□□□ 0.73
GET4-202ENST00000407192 TNIKQ9UKE5 1360 aa19.57■□□□□ 0.72
GET4-202ENST00000407192 ERCC6Q03468 1493 aa19.54■□□□□ 0.72
GET4-202ENST00000407192 HNRNPUQ00839 825 aaKnown RBP eCLIP19.53■□□□□ 0.72
GET4-202ENST00000407192 CLSPNQ9HAW4 1339 aa19.51■□□□□ 0.71
GET4-202ENST00000407192 UNC13AQ9UPW8 1703 aa19.51■□□□□ 0.71
GET4-202ENST00000407192 FAM9BQ8IZU0 186 aa19.5■□□□□ 0.71
GET4-202ENST00000407192 CDK11AQ9UQ88 783 aaPredicted RBP19.5■□□□□ 0.71
GET4-202ENST00000407192 ABCC8Q09428 1581 aa19.49■□□□□ 0.71
GET4-202ENST00000407192 MTUS2Q5JR59 1369 aa19.48■□□□□ 0.71
GET4-202ENST00000407192 RRP7BPQ9NSQ0 103 aa19.48■□□□□ 0.71
GET4-202ENST00000407192 RTL5Q5HYW3 569 aaPredicted RBP19.47■□□□□ 0.71
GET4-202ENST00000407192 CEP164Q9UPV0 1460 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms