Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTTNQ86VV8 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTTNQ86VV8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.31■□□□□ 0.2
RTTNQ86VV8 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTTNQ86VV8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RTTNQ86VV8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RTTNQ86VV8 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.31■□□□□ 0.2
RTTNQ86VV8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.31■□□□□ 0.2
RTTNQ86VV8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.31■□□□□ 0.2
RTTNQ86VV8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.31■□□□□ 0.2
RTTNQ86VV8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RTTNQ86VV8 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RTTNQ86VV8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RTTNQ86VV8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.31■□□□□ 0.2
RTTNQ86VV8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.31■□□□□ 0.2
RTTNQ86VV8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.31■□□□□ 0.2
RTTNQ86VV8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTTNQ86VV8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTTNQ86VV8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RTTNQ86VV8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTTNQ86VV8 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.3■□□□□ 0.2
RTTNQ86VV8 HCG4P8-203ENST00000443049 980 ntBASIC16.3■□□□□ 0.2
RTTNQ86VV8 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.3■□□□□ 0.2
RTTNQ86VV8 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.3■□□□□ 0.2
RTTNQ86VV8 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.3■□□□□ 0.2
RTTNQ86VV8 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.3■□□□□ 0.2
RTTNQ86VV8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.3■□□□□ 0.2
RTTNQ86VV8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTTNQ86VV8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTTNQ86VV8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RTTNQ86VV8 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTTNQ86VV8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.3■□□□□ 0.2
RTTNQ86VV8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.3■□□□□ 0.2
RTTNQ86VV8 AL031598.1-201ENST00000561511 1773 ntBASIC16.3■□□□□ 0.2
RTTNQ86VV8 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RTTNQ86VV8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTTNQ86VV8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.3■□□□□ 0.2
RTTNQ86VV8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTTNQ86VV8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTTNQ86VV8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.3■□□□□ 0.2
RTTNQ86VV8 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.3■□□□□ 0.2
RTTNQ86VV8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.3■□□□□ 0.2
RTTNQ86VV8 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.3■□□□□ 0.2
RTTNQ86VV8 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.3■□□□□ 0.2
RTTNQ86VV8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RTTNQ86VV8 AP000550.4-202ENST00000639755 178 ntBASIC16.3■□□□□ 0.2
RTTNQ86VV8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTTNQ86VV8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTTNQ86VV8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTTNQ86VV8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.3■□□□□ 0.2
RTTNQ86VV8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTTNQ86VV8 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTTNQ86VV8 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.29■□□□□ 0.2
RTTNQ86VV8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTTNQ86VV8 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTTNQ86VV8 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTTNQ86VV8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTTNQ86VV8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTTNQ86VV8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTTNQ86VV8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.29■□□□□ 0.2
RTTNQ86VV8 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTTNQ86VV8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RTTNQ86VV8 AC022616.7-201ENST00000525383 220 ntBASIC16.29■□□□□ 0.2
RTTNQ86VV8 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RTTNQ86VV8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTTNQ86VV8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTTNQ86VV8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.29■□□□□ 0.2
RTTNQ86VV8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTTNQ86VV8 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTTNQ86VV8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTTNQ86VV8 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.29■□□□□ 0.2
RTTNQ86VV8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RTTNQ86VV8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RTTNQ86VV8 KRT8P45-201ENST00000414328 1447 ntBASIC16.29■□□□□ 0.2
RTTNQ86VV8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.29■□□□□ 0.2
RTTNQ86VV8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RTTNQ86VV8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTTNQ86VV8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTTNQ86VV8 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.29■□□□□ 0.2
RTTNQ86VV8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
RTTNQ86VV8 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RTTNQ86VV8 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTTNQ86VV8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTTNQ86VV8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTTNQ86VV8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.29■□□□□ 0.2
RTTNQ86VV8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTTNQ86VV8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.29■□□□□ 0.2
RTTNQ86VV8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RTTNQ86VV8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RTTNQ86VV8 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.29■□□□□ 0.2
RTTNQ86VV8 AC005332.8-201ENST00000622750 2735 ntBASIC16.29■□□□□ 0.2
RTTNQ86VV8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTTNQ86VV8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.29■□□□□ 0.2
RTTNQ86VV8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTTNQ86VV8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTTNQ86VV8 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTTNQ86VV8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTTNQ86VV8 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTTNQ86VV8 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTTNQ86VV8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms