RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 NISCHQ9Y2I1 1504 aa45.06■■■■■ 4.8
CDHR4-201ENST00000343366 ABCC9O60706 1549 aa41.1■■■■■ 4.17
CDHR4-201ENST00000343366 CCDC180Q9P1Z9 1646 aa40.75■■■■■ 4.11
CDHR4-201ENST00000343366 DNAJC5BQ9UF47 199 aa39.14■■■■□ 3.86
CDHR4-201ENST00000343366 RB1CC1Q8TDY2 1594 aa38.95■■■■□ 3.83
CDHR4-201ENST00000343366 NACADO15069 1562 aa38.6■■■■□ 3.77
CDHR4-201ENST00000343366 UNC13AQ9UPW8 1703 aa38.24■■■■□ 3.71
CDHR4-201ENST00000343366 PABPN1Q86U42 306 aaKnown RBP eCLIP38.1■■■■□ 3.69
CDHR4-201ENST00000343366 BICRAQ9NZM4 1560 aa37.98■■■■□ 3.67
CDHR4-201ENST00000343366 MYO15BQ96JP2 1530 aa37.98■■■■□ 3.67
CDHR4-201ENST00000343366 DCAF8L2P0C7V8 631 aa37.88■■■■□ 3.65
CDHR4-201ENST00000343366 SHROOM4Q9ULL8 1493 aa37.39■■■■□ 3.58
CDHR4-201ENST00000343366 DCAF1Q9Y4B6 1507 aa37.28■■■■□ 3.56
CDHR4-201ENST00000343366 ZCCHC6Q5VYS8 1495 aaKnown RBP37.26■■■■□ 3.56
CDHR4-201ENST00000343366 CC2D2AQ9P2K1 1620 aa37.2■■■■□ 3.55
CDHR4-201ENST00000343366 CECR2Q9BXF3 1484 aa37.11■■■■□ 3.53
CDHR4-201ENST00000343366 EIF4G1Q04637 1599 aaKnown RBP37■■■■□ 3.51
CDHR4-201ENST00000343366 SCRIBQ14160 1630 aa36.96■■■■□ 3.51
CDHR4-201ENST00000343366 DNAJC5Q9H3Z4 198 aa36.3■■■■□ 3.4
CDHR4-201ENST00000343366 CUX2O14529 1486 aa35.74■■■■□ 3.31
CDHR4-201ENST00000343366 NCAPD3P42695 1498 aa35.66■■■■□ 3.3
CDHR4-201ENST00000343366 ERCC6Q03468 1493 aa35.45■■■■□ 3.27
CDHR4-201ENST00000343366 ATAD2BQ9ULI0 1458 aa35.44■■■■□ 3.26
CDHR4-201ENST00000343366 HMGXB3Q12766 1538 aa35.36■■■■□ 3.25
CDHR4-201ENST00000343366 SMARCA2P51531 1590 aa35.29■■■■□ 3.24
CDHR4-201ENST00000343366 SMARCA4P51532 1647 aa35.28■■■■□ 3.24
CDHR4-201ENST00000343366 NESP48681 1621 aa35.21■■■■□ 3.23
CDHR4-201ENST00000343366 THOC2Q8NI27 1593 aaKnown RBP35.08■■■■□ 3.21
CDHR4-201ENST00000343366 PEG3Q9GZU2 1588 aa35.04■■■■□ 3.2
CDHR4-201ENST00000343366 BAZ1AQ9NRL2 1556 aaPredicted RBP34.99■■■■□ 3.19
CDHR4-201ENST00000343366 BAZ1BQ9UIG0 1483 aaKnown RBP34.98■■■■□ 3.19
CDHR4-201ENST00000343366 LAMC3Q9Y6N6 1575 aa34.92■■■■□ 3.18
CDHR4-201ENST00000343366 KIF21AQ7Z4S6 1674 aa34.8■■■■□ 3.16
CDHR4-201ENST00000343366 MROH2BQ7Z745 1585 aa34.71■■■■□ 3.15
CDHR4-201ENST00000343366 PDS5BQ9NTI5 1447 aa34.63■■■■□ 3.13
CDHR4-201ENST00000343366 CADPSQ9ULU8 1353 aa34.47■■■■□ 3.11
CDHR4-201ENST00000343366 WDR62O43379 1518 aa34.45■■■■□ 3.1
CDHR4-201ENST00000343366 MRC2Q9UBG0 1479 aa34.42■■■■□ 3.1
CDHR4-201ENST00000343366 TRIM41Q8WV44 630 aa34.26■■■■□ 3.08
CDHR4-201ENST00000343366 WIZO95785 1651 aa34.25■■■■□ 3.07
CDHR4-201ENST00000343366 CEP164Q9UPV0 1460 aa34.14■■■■□ 3.06
CDHR4-201ENST00000343366 FANCD2Q9BXW9 1451 aa34.07■■■■□ 3.04
CDHR4-201ENST00000343366 CFTRP13569 1480 aa34.02■■■■□ 3.04
CDHR4-201ENST00000343366 RSF1Q96T23 1441 aaPredicted RBP33.95■■■■□ 3.02
CDHR4-201ENST00000343366 URB2Q14146 1524 aaKnown RBP33.89■■■■□ 3.02
CDHR4-201ENST00000343366 OSCARQ8IYS5 282 aa33.86■■■■□ 3.01
CDHR4-201ENST00000343366 TOP2AP11388 1531 aaKnown RBP33.79■■■■□ 3
CDHR4-201ENST00000343366 PRDM2Q13029 1718 aa33.71■■■□□ 2.99
CDHR4-201ENST00000343366 RIMBP3CA6NJZ7 1639 aa33.65■■■□□ 2.98
CDHR4-201ENST00000343366 RIMBP3BA6NNM3 1639 aa33.65■■■□□ 2.98
CDHR4-201ENST00000343366 RIMBP3Q9UFD9 1639 aa33.65■■■□□ 2.98
CDHR4-201ENST00000343366 ZNF608Q9ULD9 1512 aaPredicted RBP33.53■■■□□ 2.96
CDHR4-201ENST00000343366 IFT140Q96RY7 1462 aa33.5■■■□□ 2.95
CDHR4-201ENST00000343366 ARHGEF11O15085 1522 aa33.47■■■□□ 2.95
CDHR4-201ENST00000343366 TOPBP1Q92547 1522 aa33.4■■■□□ 2.94
CDHR4-201ENST00000343366 SUPT5HO00267 1087 aaKnown RBP33.38■■■□□ 2.93
CDHR4-201ENST00000343366 CCDC88BA6NC98 1476 aa33.37■■■□□ 2.93
CDHR4-201ENST00000343366 EIF4G3O43432 1585 aaKnown RBP33.35■■■□□ 2.93
CDHR4-201ENST00000343366 ABCC8Q09428 1581 aa33.26■■■□□ 2.91
CDHR4-201ENST00000343366 DNMBPQ6XZF7 1577 aa33.24■■■□□ 2.91
CDHR4-201ENST00000343366 TARBP1Q13395 1621 aaKnown RBP33.24■■■□□ 2.91
CDHR4-201ENST00000343366 CHD1O14646 1710 aa33.22■■■□□ 2.91
CDHR4-201ENST00000343366 ARAP1Q96P48 1450 aa33.12■■■□□ 2.89
CDHR4-201ENST00000343366 AQRO60306 1485 aaKnown RBP eCLIP33.1■■■□□ 2.89
CDHR4-201ENST00000343366 CYB5RLQ6IPT4 315 aa33.07■■■□□ 2.88
CDHR4-201ENST00000343366 POLA1P09884 1462 aaPredicted RBP33.03■■■□□ 2.88
CDHR4-201ENST00000343366 CLASP1Q7Z460 1538 aa32.87■■■□□ 2.85
CDHR4-201ENST00000343366 RAD54L2Q9Y4B4 1467 aa32.86■■■□□ 2.85
CDHR4-201ENST00000343366 WDR97A6NE52 1622 aa32.84■■■□□ 2.85
CDHR4-201ENST00000343366 TRHP20396 242 aaPredicted RBP32.78■■■□□ 2.84
CDHR4-201ENST00000343366 SOGA1O94964 1423 aa32.77■■■□□ 2.84
CDHR4-201ENST00000343366 FBLN2P98095 1184 aa32.77■■■□□ 2.84
CDHR4-201ENST00000343366 TDRD9Q8NDG6 1382 aaKnown RBP32.77■■■□□ 2.84
CDHR4-201ENST00000343366 SNAPC4Q5SXM2 1469 aa32.77■■■□□ 2.84
CDHR4-201ENST00000343366 FGD5Q6ZNL6 1462 aa32.71■■■□□ 2.83
CDHR4-201ENST00000343366 MAGI1Q96QZ7 1491 aaPredicted RBP32.69■■■□□ 2.82
CDHR4-201ENST00000343366 SYNJ1O43426 1573 aa32.68■■■□□ 2.82
CDHR4-201ENST00000343366 CUX1P39880 1505 aa32.65■■■□□ 2.82
CDHR4-201ENST00000343366 GRIN2BQ13224 1484 aa32.6■■■□□ 2.81
CDHR4-201ENST00000343366 SYNJ2O15056 1496 aa32.57■■■□□ 2.8
CDHR4-201ENST00000343366 CHMP7Q8WUX9 453 aaPredicted RBP32.52■■■□□ 2.8
CDHR4-201ENST00000343366 PBRM1Q86U86 1689 aa32.51■■■□□ 2.79
CDHR4-201ENST00000343366 GAPVD1Q14C86 1478 aa32.42■■■□□ 2.78
CDHR4-201ENST00000343366 ABCA5Q8WWZ7 1642 aa32.41■■■□□ 2.78
CDHR4-201ENST00000343366 ABCA10Q8WWZ4 1543 aa32.36■■■□□ 2.77
CDHR4-201ENST00000343366 ERCC6L2Q5T890 1561 aa32.28■■■□□ 2.76
CDHR4-201ENST00000343366 GRIN2AQ12879 1464 aa32.22■■■□□ 2.75
CDHR4-201ENST00000343366 NUP160Q12769 1436 aa32.18■■■□□ 2.74
CDHR4-201ENST00000343366 AEBP2Q6ZN18 517 aaPredicted RBP32.18■■■□□ 2.74
CDHR4-201ENST00000343366 ADAMTS12P58397 1594 aa32.17■■■□□ 2.74
CDHR4-201ENST00000343366 CEP170Q5SW79 1584 aa32.17■■■□□ 2.74
CDHR4-201ENST00000343366 SHROOM2Q13796 1616 aa32.16■■■□□ 2.74
CDHR4-201ENST00000343366 WRNQ14191 1432 aaPredicted RBP eCLIP32.04■■■□□ 2.72
CDHR4-201ENST00000343366 KIF13AQ9H1H9 1805 aa32.03■■■□□ 2.72
CDHR4-201ENST00000343366 BIVM-ERCC5R4GMW8 1640 aa32.03■■■□□ 2.72
CDHR4-201ENST00000343366 TOP2BQ02880 1626 aa31.98■■■□□ 2.71
CDHR4-201ENST00000343366 FHAD1B1AJZ9 1412 aa31.98■■■□□ 2.71
CDHR4-201ENST00000343366 ERICH3Q5RHP9 1530 aa31.93■■■□□ 2.7
CDHR4-201ENST00000343366 PRG4Q92954 1404 aaPredicted RBP31.79■■■□□ 2.68
CDHR4-201ENST00000343366 RUSC2Q8N2Y8 1516 aa31.75■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms