RNA–Protein interactions for RNA: ENST00000443049.1

HCG4P8-203, Transcript of HLA complex group 4 pseudogene 8, humanhuman

BASIC

Gene HCG4P8, Length 980 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG4P8-203ENST00000443049 NISCHQ9Y2I1 1504 aa45.58■■■■■ 4.89
HCG4P8-203ENST00000443049 ABCC9O60706 1549 aa41.06■■■■■ 4.16
HCG4P8-203ENST00000443049 CCDC180Q9P1Z9 1646 aa41.04■■■■■ 4.16
HCG4P8-203ENST00000443049 RB1CC1Q8TDY2 1594 aa39.07■■■■□ 3.84
HCG4P8-203ENST00000443049 NACADO15069 1562 aa38.75■■■■□ 3.79
HCG4P8-203ENST00000443049 DCAF8L2P0C7V8 631 aa38.5■■■■□ 3.75
HCG4P8-203ENST00000443049 DNAJC5BQ9UF47 199 aa38.45■■■■□ 3.75
HCG4P8-203ENST00000443049 UNC13AQ9UPW8 1703 aa38.29■■■■□ 3.72
HCG4P8-203ENST00000443049 PABPN1Q86U42 306 aaKnown RBP eCLIP38.15■■■■□ 3.7
HCG4P8-203ENST00000443049 MYO15BQ96JP2 1530 aa38.13■■■■□ 3.69
HCG4P8-203ENST00000443049 BICRAQ9NZM4 1560 aa37.9■■■■□ 3.66
HCG4P8-203ENST00000443049 ZCCHC6Q5VYS8 1495 aaKnown RBP37.78■■■■□ 3.64
HCG4P8-203ENST00000443049 DCAF1Q9Y4B6 1507 aa37.63■■■■□ 3.61
HCG4P8-203ENST00000443049 SCRIBQ14160 1630 aa37.4■■■■□ 3.58
HCG4P8-203ENST00000443049 SHROOM4Q9ULL8 1493 aa37.38■■■■□ 3.57
HCG4P8-203ENST00000443049 CC2D2AQ9P2K1 1620 aa37.12■■■■□ 3.53
HCG4P8-203ENST00000443049 EIF4G1Q04637 1599 aaKnown RBP37■■■■□ 3.51
HCG4P8-203ENST00000443049 CECR2Q9BXF3 1484 aa36.98■■■■□ 3.51
HCG4P8-203ENST00000443049 NCAPD3P42695 1498 aa35.7■■■■□ 3.31
HCG4P8-203ENST00000443049 SMARCA4P51532 1647 aa35.64■■■■□ 3.3
HCG4P8-203ENST00000443049 ATAD2BQ9ULI0 1458 aa35.62■■■■□ 3.29
HCG4P8-203ENST00000443049 SMARCA2P51531 1590 aa35.57■■■■□ 3.28
HCG4P8-203ENST00000443049 HMGXB3Q12766 1538 aa35.52■■■■□ 3.28
HCG4P8-203ENST00000443049 ERCC6Q03468 1493 aa35.49■■■■□ 3.27
HCG4P8-203ENST00000443049 BAZ1AQ9NRL2 1556 aaPredicted RBP35.42■■■■□ 3.26
HCG4P8-203ENST00000443049 CUX2O14529 1486 aa35.41■■■■□ 3.26
HCG4P8-203ENST00000443049 DNAJC5Q9H3Z4 198 aa35.38■■■■□ 3.25
HCG4P8-203ENST00000443049 BAZ1BQ9UIG0 1483 aaKnown RBP35.33■■■■□ 3.25
HCG4P8-203ENST00000443049 PEG3Q9GZU2 1588 aa35.24■■■■□ 3.23
HCG4P8-203ENST00000443049 NESP48681 1621 aa35.24■■■■□ 3.23
HCG4P8-203ENST00000443049 MROH2BQ7Z745 1585 aa35.13■■■■□ 3.21
HCG4P8-203ENST00000443049 LAMC3Q9Y6N6 1575 aa35■■■■□ 3.19
HCG4P8-203ENST00000443049 THOC2Q8NI27 1593 aaKnown RBP34.96■■■■□ 3.19
HCG4P8-203ENST00000443049 KIF21AQ7Z4S6 1674 aa34.89■■■■□ 3.18
HCG4P8-203ENST00000443049 WIZO95785 1651 aa34.76■■■■□ 3.16
HCG4P8-203ENST00000443049 PDS5BQ9NTI5 1447 aa34.76■■■■□ 3.16
HCG4P8-203ENST00000443049 CADPSQ9ULU8 1353 aa34.62■■■■□ 3.13
HCG4P8-203ENST00000443049 MRC2Q9UBG0 1479 aa34.5■■■■□ 3.11
HCG4P8-203ENST00000443049 WDR62O43379 1518 aa34.43■■■■□ 3.1
HCG4P8-203ENST00000443049 CEP164Q9UPV0 1460 aa34.36■■■■□ 3.09
HCG4P8-203ENST00000443049 RSF1Q96T23 1441 aaPredicted RBP34.32■■■■□ 3.08
HCG4P8-203ENST00000443049 TOP2AP11388 1531 aaKnown RBP34.3■■■■□ 3.08
HCG4P8-203ENST00000443049 FANCD2Q9BXW9 1451 aa34.29■■■■□ 3.08
HCG4P8-203ENST00000443049 CFTRP13569 1480 aa34.23■■■■□ 3.07
HCG4P8-203ENST00000443049 PRDM2Q13029 1718 aa34.08■■■■□ 3.05
HCG4P8-203ENST00000443049 URB2Q14146 1524 aaKnown RBP34.01■■■■□ 3.04
HCG4P8-203ENST00000443049 TRIM41Q8WV44 630 aa33.9■■■■□ 3.02
HCG4P8-203ENST00000443049 CCDC88BA6NC98 1476 aa33.85■■■■□ 3.01
HCG4P8-203ENST00000443049 OSCARQ8IYS5 282 aa33.7■■■□□ 2.99
HCG4P8-203ENST00000443049 IFT140Q96RY7 1462 aa33.64■■■□□ 2.98
HCG4P8-203ENST00000443049 TOPBP1Q92547 1522 aa33.63■■■□□ 2.97
HCG4P8-203ENST00000443049 ZNF608Q9ULD9 1512 aaPredicted RBP33.6■■■□□ 2.97
HCG4P8-203ENST00000443049 DNMBPQ6XZF7 1577 aa33.54■■■□□ 2.96
HCG4P8-203ENST00000443049 ABCC8Q09428 1581 aa33.53■■■□□ 2.96
HCG4P8-203ENST00000443049 EIF4G3O43432 1585 aaKnown RBP33.5■■■□□ 2.95
HCG4P8-203ENST00000443049 RIMBP3CA6NJZ7 1639 aa33.41■■■□□ 2.94
HCG4P8-203ENST00000443049 RIMBP3BA6NNM3 1639 aa33.41■■■□□ 2.94
HCG4P8-203ENST00000443049 RIMBP3Q9UFD9 1639 aa33.41■■■□□ 2.94
HCG4P8-203ENST00000443049 TARBP1Q13395 1621 aaKnown RBP33.36■■■□□ 2.93
HCG4P8-203ENST00000443049 CHD1O14646 1710 aa33.31■■■□□ 2.92
HCG4P8-203ENST00000443049 POLA1P09884 1462 aaPredicted RBP33.28■■■□□ 2.92
HCG4P8-203ENST00000443049 AQRO60306 1485 aaKnown RBP eCLIP33.26■■■□□ 2.92
HCG4P8-203ENST00000443049 ARHGEF11O15085 1522 aa33.26■■■□□ 2.91
HCG4P8-203ENST00000443049 RAD54L2Q9Y4B4 1467 aa33.15■■■□□ 2.9
HCG4P8-203ENST00000443049 SOGA1O94964 1423 aa33.09■■■□□ 2.89
HCG4P8-203ENST00000443049 FBLN2P98095 1184 aa33.08■■■□□ 2.89
HCG4P8-203ENST00000443049 FGD5Q6ZNL6 1462 aa33.07■■■□□ 2.88
HCG4P8-203ENST00000443049 TDRD9Q8NDG6 1382 aaKnown RBP33.04■■■□□ 2.88
HCG4P8-203ENST00000443049 CUX1P39880 1505 aa33.03■■■□□ 2.88
HCG4P8-203ENST00000443049 WDR97A6NE52 1622 aa33.02■■■□□ 2.88
HCG4P8-203ENST00000443049 SNAPC4Q5SXM2 1469 aa32.98■■■□□ 2.87
HCG4P8-203ENST00000443049 CYB5RLQ6IPT4 315 aa32.95■■■□□ 2.87
HCG4P8-203ENST00000443049 ARAP1Q96P48 1450 aa32.92■■■□□ 2.86
HCG4P8-203ENST00000443049 MAGI1Q96QZ7 1491 aaPredicted RBP32.86■■■□□ 2.85
HCG4P8-203ENST00000443049 GRIN2BQ13224 1484 aa32.85■■■□□ 2.85
HCG4P8-203ENST00000443049 PBRM1Q86U86 1689 aa32.85■■■□□ 2.85
HCG4P8-203ENST00000443049 SYNJ1O43426 1573 aa32.83■■■□□ 2.85
HCG4P8-203ENST00000443049 CLASP1Q7Z460 1538 aa32.82■■■□□ 2.85
HCG4P8-203ENST00000443049 CHMP7Q8WUX9 453 aaPredicted RBP32.79■■■□□ 2.84
HCG4P8-203ENST00000443049 SUPT5HO00267 1087 aaKnown RBP32.77■■■□□ 2.84
HCG4P8-203ENST00000443049 SYNJ2O15056 1496 aa32.75■■■□□ 2.83
HCG4P8-203ENST00000443049 GAPVD1Q14C86 1478 aa32.73■■■□□ 2.83
HCG4P8-203ENST00000443049 ABCA5Q8WWZ7 1642 aa32.69■■■□□ 2.82
HCG4P8-203ENST00000443049 ABCA10Q8WWZ4 1543 aa32.67■■■□□ 2.82
HCG4P8-203ENST00000443049 TRHP20396 242 aaPredicted RBP32.65■■■□□ 2.82
HCG4P8-203ENST00000443049 BIVM-ERCC5R4GMW8 1640 aa32.53■■■□□ 2.8
HCG4P8-203ENST00000443049 WRNQ14191 1432 aaPredicted RBP eCLIP32.51■■■□□ 2.8
HCG4P8-203ENST00000443049 TOP2BQ02880 1626 aa32.5■■■□□ 2.79
HCG4P8-203ENST00000443049 ADAMTS12P58397 1594 aa32.47■■■□□ 2.79
HCG4P8-203ENST00000443049 GRIN2AQ12879 1464 aa32.44■■■□□ 2.78
HCG4P8-203ENST00000443049 CEP170Q5SW79 1584 aa32.35■■■□□ 2.77
HCG4P8-203ENST00000443049 ERCC6L2Q5T890 1561 aa32.31■■■□□ 2.76
HCG4P8-203ENST00000443049 NUP160Q12769 1436 aa32.3■■■□□ 2.76
HCG4P8-203ENST00000443049 FHAD1B1AJZ9 1412 aa32.28■■■□□ 2.76
HCG4P8-203ENST00000443049 ERICH3Q5RHP9 1530 aa32.28■■■□□ 2.76
HCG4P8-203ENST00000443049 SHROOM2Q13796 1616 aa32.22■■■□□ 2.75
HCG4P8-203ENST00000443049 RUSC2Q8N2Y8 1516 aa32.02■■■□□ 2.72
HCG4P8-203ENST00000443049 PRG4Q92954 1404 aaPredicted RBP32■■■□□ 2.71
HCG4P8-203ENST00000443049 JPH4Q96JJ6 628 aa31.91■■■□□ 2.7
HCG4P8-203ENST00000443049 KIF13AQ9H1H9 1805 aa31.89■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms