RNA–Protein interactions for RNA: ENST00000220913.9

CHRAC1-201, Transcript of chromatin accessibility complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRAC1, Length 2,488 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRAC1-201ENST00000220913 NISCHQ9Y2I1 1504 aa40.11■■■■■ 4.01
CHRAC1-201ENST00000220913 CCDC180Q9P1Z9 1646 aa34.53■■■■□ 3.12
CHRAC1-201ENST00000220913 ZCCHC6Q5VYS8 1495 aaKnown RBP33.85■■■■□ 3.01
CHRAC1-201ENST00000220913 SHROOM4Q9ULL8 1493 aa33.52■■■□□ 2.96
CHRAC1-201ENST00000220913 DCAF8L2P0C7V8 631 aa33.11■■■□□ 2.89
CHRAC1-201ENST00000220913 DCAF1Q9Y4B6 1507 aa33.03■■■□□ 2.88
CHRAC1-201ENST00000220913 SUPT5HO00267 1087 aaKnown RBP32.59■■■□□ 2.81
CHRAC1-201ENST00000220913 MYO15BQ96JP2 1530 aa32.32■■■□□ 2.76
CHRAC1-201ENST00000220913 ABCC9O60706 1549 aa32.21■■■□□ 2.75
CHRAC1-201ENST00000220913 SCRIBQ14160 1630 aa32.08■■■□□ 2.73
CHRAC1-201ENST00000220913 NACADO15069 1562 aa31.99■■■□□ 2.71
CHRAC1-201ENST00000220913 RB1CC1Q8TDY2 1594 aa31.58■■■□□ 2.65
CHRAC1-201ENST00000220913 CHIC1Q5VXU3 224 aa31.49■■■□□ 2.63
CHRAC1-201ENST00000220913 RSF1Q96T23 1441 aaPredicted RBP31.45■■■□□ 2.63
CHRAC1-201ENST00000220913 CECR2Q9BXF3 1484 aa31.22■■■□□ 2.59
CHRAC1-201ENST00000220913 UNC13AQ9UPW8 1703 aa31.1■■■□□ 2.57
CHRAC1-201ENST00000220913 MROH2BQ7Z745 1585 aa31.1■■■□□ 2.57
CHRAC1-201ENST00000220913 WIZO95785 1651 aa30.92■■■□□ 2.54
CHRAC1-201ENST00000220913 BAZ1AQ9NRL2 1556 aaPredicted RBP30.89■■■□□ 2.54
CHRAC1-201ENST00000220913 SMARCA4P51532 1647 aa30.7■■■□□ 2.51
CHRAC1-201ENST00000220913 BICRAQ9NZM4 1560 aa30.69■■■□□ 2.5
CHRAC1-201ENST00000220913 PABPN1Q86U42 306 aaKnown RBP eCLIP30.58■■■□□ 2.49
CHRAC1-201ENST00000220913 TOP2AP11388 1531 aaKnown RBP30.51■■■□□ 2.47
CHRAC1-201ENST00000220913 TRIM41Q8WV44 630 aa30.48■■■□□ 2.47
CHRAC1-201ENST00000220913 LOC105371045A0A1W2PR82 267 aa30.42■■■□□ 2.46
CHRAC1-201ENST00000220913 EIF4G1Q04637 1599 aaKnown RBP30.34■■■□□ 2.45
CHRAC1-201ENST00000220913 SMARCA2P51531 1590 aa30.29■■■□□ 2.44
CHRAC1-201ENST00000220913 CCDC88BA6NC98 1476 aa30.26■■■□□ 2.44
CHRAC1-201ENST00000220913 PEG3Q9GZU2 1588 aa30.2■■■□□ 2.42
CHRAC1-201ENST00000220913 FAM9AQ8IZU1 332 aaPredicted RBP30.1■■■□□ 2.41
CHRAC1-201ENST00000220913 ATAD2BQ9ULI0 1458 aa30■■■□□ 2.39
CHRAC1-201ENST00000220913 ABCC8Q09428 1581 aa29.98■■■□□ 2.39
CHRAC1-201ENST00000220913 BAZ1BQ9UIG0 1483 aaKnown RBP29.89■■■□□ 2.38
CHRAC1-201ENST00000220913 PCGF6Q9BYE7 350 aa29.84■■■□□ 2.37
CHRAC1-201ENST00000220913 EHMT2Q96KQ7 1210 aa29.77■■■□□ 2.36
CHRAC1-201ENST00000220913 WRNQ14191 1432 aaPredicted RBP eCLIP29.58■■■□□ 2.33
CHRAC1-201ENST00000220913 HMGXB3Q12766 1538 aa29.57■■■□□ 2.32
CHRAC1-201ENST00000220913 NCAPD3P42695 1498 aa29.55■■■□□ 2.32
CHRAC1-201ENST00000220913 SOGA1O94964 1423 aa29.54■■■□□ 2.32
CHRAC1-201ENST00000220913 HRCP23327 699 aa29.51■■■□□ 2.31
CHRAC1-201ENST00000220913 TRIM26Q12899 539 aaPredicted RBP29.51■■■□□ 2.31
CHRAC1-201ENST00000220913 SYNJ1O43426 1573 aa29.48■■■□□ 2.31
CHRAC1-201ENST00000220913 EEA1Q15075 1411 aa29.44■■■□□ 2.3
CHRAC1-201ENST00000220913 RUSC2Q8N2Y8 1516 aa29.41■■■□□ 2.3
CHRAC1-201ENST00000220913 CSRNP3Q8WYN3 585 aa29.32■■■□□ 2.28
CHRAC1-201ENST00000220913 TOP2BQ02880 1626 aa29.22■■■□□ 2.27
CHRAC1-201ENST00000220913 TNIKQ9UKE5 1360 aa29.2■■■□□ 2.27
CHRAC1-201ENST00000220913 CEP162Q5TB80 1403 aa29.18■■■□□ 2.26
CHRAC1-201ENST00000220913 GOLGA3Q08378 1498 aa29.17■■■□□ 2.26
CHRAC1-201ENST00000220913 BIVM-ERCC5R4GMW8 1640 aa29.17■■■□□ 2.26
CHRAC1-201ENST00000220913 CFTRP13569 1480 aa29.14■■■□□ 2.26
CHRAC1-201ENST00000220913 CC2D2AQ9P2K1 1620 aa29.1■■■□□ 2.25
CHRAC1-201ENST00000220913 UBTFP17480 764 aaKnown RBP29.1■■■□□ 2.25
CHRAC1-201ENST00000220913 KIF21BO75037 1637 aa29.09■■■□□ 2.25
CHRAC1-201ENST00000220913 CEP164Q9UPV0 1460 aa29.07■■■□□ 2.24
CHRAC1-201ENST00000220913 PRDM2Q13029 1718 aa29.03■■■□□ 2.24
CHRAC1-201ENST00000220913 PPARGC1BQ86YN6 1023 aaKnown RBP29.03■■■□□ 2.24
CHRAC1-201ENST00000220913 CUX1P39880 1505 aa29.02■■■□□ 2.24
CHRAC1-201ENST00000220913 CADPSQ9ULU8 1353 aa28.89■■■□□ 2.22
CHRAC1-201ENST00000220913 RAPGEF2Q9Y4G8 1499 aa28.89■■■□□ 2.21
CHRAC1-201ENST00000220913 CLIP1P30622 1438 aa28.76■■■□□ 2.19
CHRAC1-201ENST00000220913 KIF27Q86VH2 1401 aa28.73■■■□□ 2.19
CHRAC1-201ENST00000220913 ERICH3Q5RHP9 1530 aa28.73■■■□□ 2.19
CHRAC1-201ENST00000220913 PRXQ9BXM0 1461 aa28.73■■■□□ 2.19
CHRAC1-201ENST00000220913 TTBK1Q5TCY1 1321 aaPredicted RBP28.69■■■□□ 2.18
CHRAC1-201ENST00000220913 ZEB1P37275 1124 aaPredicted RBP28.64■■■□□ 2.17
CHRAC1-201ENST00000220913 FANCD2Q9BXW9 1451 aa28.62■■■□□ 2.17
CHRAC1-201ENST00000220913 VPS8Q8N3P4 1428 aa28.6■■■□□ 2.17
CHRAC1-201ENST00000220913 FGD5Q6ZNL6 1462 aa28.58■■■□□ 2.17
CHRAC1-201ENST00000220913 CUX2O14529 1486 aa28.55■■■□□ 2.16
CHRAC1-201ENST00000220913 RANGAP1P46060 587 aaPredicted RBP28.55■■■□□ 2.16
CHRAC1-201ENST00000220913 NESP48681 1621 aa28.54■■■□□ 2.16
CHRAC1-201ENST00000220913 DNMBPQ6XZF7 1577 aa28.46■■■□□ 2.15
CHRAC1-201ENST00000220913 LAMC3Q9Y6N6 1575 aa28.43■■■□□ 2.14
CHRAC1-201ENST00000220913 IGF1RP08069 1367 aa28.42■■■□□ 2.14
CHRAC1-201ENST00000220913 ARAP1Q96P48 1450 aa28.4■■■□□ 2.14
CHRAC1-201ENST00000220913 TOPBP1Q92547 1522 aa28.39■■■□□ 2.14
CHRAC1-201ENST00000220913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.36■■■□□ 2.13
CHRAC1-201ENST00000220913 APLP2Q06481 763 aa28.35■■■□□ 2.13
CHRAC1-201ENST00000220913 POLA1P09884 1462 aaPredicted RBP28.33■■■□□ 2.13
CHRAC1-201ENST00000220913 RAD54L2Q9Y4B4 1467 aa28.3■■■□□ 2.12
CHRAC1-201ENST00000220913 CARMIL1Q5VZK9 1371 aa28.3■■■□□ 2.12
CHRAC1-201ENST00000220913 DNAJC5BQ9UF47 199 aa28.3■■■□□ 2.12
CHRAC1-201ENST00000220913 CCER1Q8TC90 406 aaPredicted RBP28.29■■■□□ 2.12
CHRAC1-201ENST00000220913 ABCA10Q8WWZ4 1543 aa28.28■■■□□ 2.12
CHRAC1-201ENST00000220913 ARHGAP35Q9NRY4 1499 aa28.25■■■□□ 2.11
CHRAC1-201ENST00000220913 URB2Q14146 1524 aaKnown RBP28.24■■■□□ 2.11
CHRAC1-201ENST00000220913 PDS5BQ9NTI5 1447 aa28.19■■■□□ 2.1
CHRAC1-201ENST00000220913 KIF21AQ7Z4S6 1674 aa28.16■■■□□ 2.1
CHRAC1-201ENST00000220913 WDR97A6NE52 1622 aa28.14■■■□□ 2.1
CHRAC1-201ENST00000220913 CUL7Q14999 1698 aa28.09■■■□□ 2.09
CHRAC1-201ENST00000220913 HNRNPUL2Q1KMD3 747 aaKnown RBP28.06■■■□□ 2.08
CHRAC1-201ENST00000220913 KANK4Q5T7N3 995 aaPredicted RBP28.04■■■□□ 2.08
CHRAC1-201ENST00000220913 ABCA5Q8WWZ7 1642 aa28.01■■■□□ 2.07
CHRAC1-201ENST00000220913 TDRD9Q8NDG6 1382 aaKnown RBP27.96■■■□□ 2.07
CHRAC1-201ENST00000220913 CTTNBP2Q8WZ74 1663 aa27.94■■■□□ 2.06
CHRAC1-201ENST00000220913 GAPVD1Q14C86 1478 aa27.92■■■□□ 2.06
CHRAC1-201ENST00000220913 TARBP1Q13395 1621 aaKnown RBP27.89■■■□□ 2.06
CHRAC1-201ENST00000220913 TIAM1Q13009 1591 aa27.88■■■□□ 2.05
CHRAC1-201ENST00000220913 FHAD1B1AJZ9 1412 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms