RNA–Protein interactions for RNA: ENST00000306735.9

RBFA-202, Transcript of ribosome binding factor A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFA, Length 1,407 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFA-202ENST00000306735 NISCHQ9Y2I1 1504 aa45.12■■■■■ 4.81
RBFA-202ENST00000306735 ABCC9O60706 1549 aa40.98■■■■■ 4.15
RBFA-202ENST00000306735 CCDC180Q9P1Z9 1646 aa40.57■■■■■ 4.09
RBFA-202ENST00000306735 RB1CC1Q8TDY2 1594 aa38.83■■■■□ 3.81
RBFA-202ENST00000306735 DNAJC5BQ9UF47 199 aa38.76■■■■□ 3.8
RBFA-202ENST00000306735 NACADO15069 1562 aa38.48■■■■□ 3.75
RBFA-202ENST00000306735 DCAF8L2P0C7V8 631 aa38.36■■■■□ 3.73
RBFA-202ENST00000306735 PABPN1Q86U42 306 aaKnown RBP eCLIP38.15■■■■□ 3.7
RBFA-202ENST00000306735 UNC13AQ9UPW8 1703 aa37.89■■■■□ 3.66
RBFA-202ENST00000306735 MYO15BQ96JP2 1530 aa37.83■■■■□ 3.65
RBFA-202ENST00000306735 BICRAQ9NZM4 1560 aa37.69■■■■□ 3.62
RBFA-202ENST00000306735 ZCCHC6Q5VYS8 1495 aaKnown RBP37.3■■■■□ 3.56
RBFA-202ENST00000306735 DCAF1Q9Y4B6 1507 aa37.22■■■■□ 3.55
RBFA-202ENST00000306735 SHROOM4Q9ULL8 1493 aa37.15■■■■□ 3.54
RBFA-202ENST00000306735 SCRIBQ14160 1630 aa37■■■■□ 3.51
RBFA-202ENST00000306735 CC2D2AQ9P2K1 1620 aa36.97■■■■□ 3.51
RBFA-202ENST00000306735 CECR2Q9BXF3 1484 aa36.95■■■■□ 3.51
RBFA-202ENST00000306735 EIF4G1Q04637 1599 aaKnown RBP36.8■■■■□ 3.48
RBFA-202ENST00000306735 DNAJC5Q9H3Z4 198 aa35.84■■■■□ 3.33
RBFA-202ENST00000306735 NCAPD3P42695 1498 aa35.55■■■■□ 3.28
RBFA-202ENST00000306735 CUX2O14529 1486 aa35.43■■■■□ 3.26
RBFA-202ENST00000306735 ERCC6Q03468 1493 aa35.42■■■■□ 3.26
RBFA-202ENST00000306735 ATAD2BQ9ULI0 1458 aa35.4■■■■□ 3.26
RBFA-202ENST00000306735 SMARCA2P51531 1590 aa35.27■■■■□ 3.24
RBFA-202ENST00000306735 SMARCA4P51532 1647 aa35.24■■■■□ 3.23
RBFA-202ENST00000306735 HMGXB3Q12766 1538 aa35.22■■■■□ 3.23
RBFA-202ENST00000306735 NESP48681 1621 aa35.09■■■■□ 3.21
RBFA-202ENST00000306735 BAZ1BQ9UIG0 1483 aaKnown RBP35.04■■■■□ 3.2
RBFA-202ENST00000306735 BAZ1AQ9NRL2 1556 aaPredicted RBP35.04■■■■□ 3.2
RBFA-202ENST00000306735 PEG3Q9GZU2 1588 aa34.89■■■■□ 3.18
RBFA-202ENST00000306735 LAMC3Q9Y6N6 1575 aa34.77■■■■□ 3.16
RBFA-202ENST00000306735 MROH2BQ7Z745 1585 aa34.77■■■■□ 3.16
RBFA-202ENST00000306735 THOC2Q8NI27 1593 aaKnown RBP34.75■■■■□ 3.15
RBFA-202ENST00000306735 PDS5BQ9NTI5 1447 aa34.64■■■■□ 3.14
RBFA-202ENST00000306735 KIF21AQ7Z4S6 1674 aa34.58■■■■□ 3.13
RBFA-202ENST00000306735 CADPSQ9ULU8 1353 aa34.48■■■■□ 3.11
RBFA-202ENST00000306735 MRC2Q9UBG0 1479 aa34.32■■■■□ 3.09
RBFA-202ENST00000306735 WIZO95785 1651 aa34.32■■■■□ 3.08
RBFA-202ENST00000306735 WDR62O43379 1518 aa34.22■■■■□ 3.07
RBFA-202ENST00000306735 TRIM41Q8WV44 630 aa34.17■■■■□ 3.06
RBFA-202ENST00000306735 CEP164Q9UPV0 1460 aa34.13■■■■□ 3.05
RBFA-202ENST00000306735 FANCD2Q9BXW9 1451 aa34.08■■■■□ 3.05
RBFA-202ENST00000306735 CFTRP13569 1480 aa33.99■■■■□ 3.03
RBFA-202ENST00000306735 RSF1Q96T23 1441 aaPredicted RBP33.94■■■■□ 3.02
RBFA-202ENST00000306735 TOP2AP11388 1531 aaKnown RBP33.86■■■■□ 3.01
RBFA-202ENST00000306735 OSCARQ8IYS5 282 aa33.84■■■■□ 3.01
RBFA-202ENST00000306735 URB2Q14146 1524 aaKnown RBP33.8■■■■□ 3
RBFA-202ENST00000306735 PRDM2Q13029 1718 aa33.55■■■□□ 2.96
RBFA-202ENST00000306735 CCDC88BA6NC98 1476 aa33.52■■■□□ 2.96
RBFA-202ENST00000306735 IFT140Q96RY7 1462 aa33.47■■■□□ 2.95
RBFA-202ENST00000306735 ZNF608Q9ULD9 1512 aaPredicted RBP33.45■■■□□ 2.94
RBFA-202ENST00000306735 TOPBP1Q92547 1522 aa33.38■■■□□ 2.93
RBFA-202ENST00000306735 RIMBP3CA6NJZ7 1639 aa33.34■■■□□ 2.93
RBFA-202ENST00000306735 RIMBP3BA6NNM3 1639 aa33.34■■■□□ 2.93
RBFA-202ENST00000306735 RIMBP3Q9UFD9 1639 aa33.34■■■□□ 2.93
RBFA-202ENST00000306735 ABCC8Q09428 1581 aa33.3■■■□□ 2.92
RBFA-202ENST00000306735 ARHGEF11O15085 1522 aa33.21■■■□□ 2.91
RBFA-202ENST00000306735 DNMBPQ6XZF7 1577 aa33.21■■■□□ 2.91
RBFA-202ENST00000306735 EIF4G3O43432 1585 aaKnown RBP33.2■■■□□ 2.91
RBFA-202ENST00000306735 AQRO60306 1485 aaKnown RBP eCLIP33.13■■■□□ 2.897e-10■■■■□ 26.4
RBFA-202ENST00000306735 TARBP1Q13395 1621 aaKnown RBP33.08■■■□□ 2.89
RBFA-202ENST00000306735 CYB5RLQ6IPT4 315 aa33.08■■■□□ 2.89
RBFA-202ENST00000306735 FBLN2P98095 1184 aa33.04■■■□□ 2.88
RBFA-202ENST00000306735 POLA1P09884 1462 aaPredicted RBP33.02■■■□□ 2.88
RBFA-202ENST00000306735 CHD1O14646 1710 aa33.01■■■□□ 2.88
RBFA-202ENST00000306735 RAD54L2Q9Y4B4 1467 aa32.92■■■□□ 2.86
RBFA-202ENST00000306735 SOGA1O94964 1423 aa32.9■■■□□ 2.86
RBFA-202ENST00000306735 TDRD9Q8NDG6 1382 aaKnown RBP32.89■■■□□ 2.86
RBFA-202ENST00000306735 ARAP1Q96P48 1450 aa32.87■■■□□ 2.85
RBFA-202ENST00000306735 TRHP20396 242 aaPredicted RBP32.83■■■□□ 2.85
RBFA-202ENST00000306735 FGD5Q6ZNL6 1462 aa32.76■■■□□ 2.84
RBFA-202ENST00000306735 SNAPC4Q5SXM2 1469 aa32.75■■■□□ 2.83
RBFA-202ENST00000306735 CHMP7Q8WUX9 453 aaPredicted RBP32.73■■■□□ 2.83
RBFA-202ENST00000306735 WDR97A6NE52 1622 aa32.71■■■□□ 2.83
RBFA-202ENST00000306735 CUX1P39880 1505 aa32.68■■■□□ 2.82
RBFA-202ENST00000306735 MAGI1Q96QZ7 1491 aaPredicted RBP32.65■■■□□ 2.82
RBFA-202ENST00000306735 CLASP1Q7Z460 1538 aa32.64■■■□□ 2.82
RBFA-202ENST00000306735 GRIN2BQ13224 1484 aa32.63■■■□□ 2.81
RBFA-202ENST00000306735 SYNJ1O43426 1573 aa32.61■■■□□ 2.81
RBFA-202ENST00000306735 SYNJ2O15056 1496 aa32.55■■■□□ 2.8
RBFA-202ENST00000306735 GAPVD1Q14C86 1478 aa32.48■■■□□ 2.79
RBFA-202ENST00000306735 PBRM1Q86U86 1689 aa32.42■■■□□ 2.78
RBFA-202ENST00000306735 ABCA10Q8WWZ4 1543 aa32.38■■■□□ 2.77
RBFA-202ENST00000306735 ABCA5Q8WWZ7 1642 aa32.32■■■□□ 2.76
RBFA-202ENST00000306735 SUPT5HO00267 1087 aaKnown RBP32.28■■■□□ 2.76
RBFA-202ENST00000306735 WRNQ14191 1432 aaPredicted RBP eCLIP32.22■■■□□ 2.75
RBFA-202ENST00000306735 GRIN2AQ12879 1464 aa32.2■■■□□ 2.74
RBFA-202ENST00000306735 ERCC6L2Q5T890 1561 aa32.12■■■□□ 2.73
RBFA-202ENST00000306735 AEBP2Q6ZN18 517 aaPredicted RBP32.12■■■□□ 2.73
RBFA-202ENST00000306735 ADAMTS12P58397 1594 aa32.1■■■□□ 2.73
RBFA-202ENST00000306735 NUP160Q12769 1436 aa32.09■■■□□ 2.73
RBFA-202ENST00000306735 CEP170Q5SW79 1584 aa32.08■■■□□ 2.73
RBFA-202ENST00000306735 TOP2BQ02880 1626 aa32.05■■■□□ 2.72
RBFA-202ENST00000306735 FHAD1B1AJZ9 1412 aa32.05■■■□□ 2.72
RBFA-202ENST00000306735 BIVM-ERCC5R4GMW8 1640 aa32.04■■■□□ 2.72
RBFA-202ENST00000306735 ERICH3Q5RHP9 1530 aa31.96■■■□□ 2.71
RBFA-202ENST00000306735 SHROOM2Q13796 1616 aa31.96■■■□□ 2.71
RBFA-202ENST00000306735 PRG4Q92954 1404 aaPredicted RBP31.85■■■□□ 2.69
RBFA-202ENST00000306735 JPH4Q96JJ6 628 aa31.84■■■□□ 2.69
RBFA-202ENST00000306735 KIF13AQ9H1H9 1805 aa31.7■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms