RNA–Protein interactions for RNA: ENST00000323224.7

TYMS-201, Transcript of thymidylate synthetase, humanhuman

TSL 1 (best) BASIC

Gene TYMS, Length 1,327 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMS-201ENST00000323224 NISCHQ9Y2I1 1504 aa46.69■■■■■ 5.07
TYMS-201ENST00000323224 CCDC180Q9P1Z9 1646 aa41.74■■■■■ 4.27
TYMS-201ENST00000323224 ABCC9O60706 1549 aa41.51■■■■■ 4.24
TYMS-201ENST00000323224 RB1CC1Q8TDY2 1594 aa39.56■■■■□ 3.92
TYMS-201ENST00000323224 NACADO15069 1562 aa39.35■■■■□ 3.89
TYMS-201ENST00000323224 DCAF8L2P0C7V8 631 aa39.28■■■■□ 3.88
TYMS-201ENST00000323224 MYO15BQ96JP2 1530 aa38.87■■■■□ 3.81
TYMS-201ENST00000323224 UNC13AQ9UPW8 1703 aa38.81■■■■□ 3.8
TYMS-201ENST00000323224 ZCCHC6Q5VYS8 1495 aaKnown RBP38.78■■■■□ 3.8
TYMS-201ENST00000323224 PABPN1Q86U42 306 aaKnown RBP eCLIP38.7■■■■□ 3.79
TYMS-201ENST00000323224 DNAJC5BQ9UF47 199 aa38.69■■■■□ 3.78
TYMS-201ENST00000323224 DCAF1Q9Y4B6 1507 aa38.52■■■■□ 3.76
TYMS-201ENST00000323224 BICRAQ9NZM4 1560 aa38.5■■■■□ 3.75
TYMS-201ENST00000323224 SCRIBQ14160 1630 aa38.14■■■■□ 3.7
TYMS-201ENST00000323224 SHROOM4Q9ULL8 1493 aa37.82■■■■□ 3.65
TYMS-201ENST00000323224 CC2D2AQ9P2K1 1620 aa37.5■■■■□ 3.59
TYMS-201ENST00000323224 EIF4G1Q04637 1599 aaKnown RBP37.48■■■■□ 3.59
TYMS-201ENST00000323224 CECR2Q9BXF3 1484 aa37.31■■■■□ 3.56
TYMS-201ENST00000323224 SMARCA4P51532 1647 aa36.38■■■■□ 3.41
TYMS-201ENST00000323224 NCAPD3P42695 1498 aa36.33■■■■□ 3.41
TYMS-201ENST00000323224 ATAD2BQ9ULI0 1458 aa36.32■■■■□ 3.4
TYMS-201ENST00000323224 BAZ1AQ9NRL2 1556 aaPredicted RBP36.19■■■■□ 3.38
TYMS-201ENST00000323224 SMARCA2P51531 1590 aa36.18■■■■□ 3.38
TYMS-201ENST00000323224 HMGXB3Q12766 1538 aa36.11■■■■□ 3.37
TYMS-201ENST00000323224 MROH2BQ7Z745 1585 aa36.05■■■■□ 3.36
TYMS-201ENST00000323224 PEG3Q9GZU2 1588 aa35.98■■■■□ 3.35
TYMS-201ENST00000323224 BAZ1BQ9UIG0 1483 aaKnown RBP35.97■■■■□ 3.35
TYMS-201ENST00000323224 NESP48681 1621 aa35.79■■■■□ 3.32
TYMS-201ENST00000323224 ERCC6Q03468 1493 aa35.74■■■■□ 3.31
TYMS-201ENST00000323224 WIZO95785 1651 aa35.65■■■■□ 3.3
TYMS-201ENST00000323224 CUX2O14529 1486 aa35.53■■■■□ 3.28
TYMS-201ENST00000323224 LAMC3Q9Y6N6 1575 aa35.47■■■■□ 3.27
TYMS-201ENST00000323224 RSF1Q96T23 1441 aaPredicted RBP35.38■■■■□ 3.25
TYMS-201ENST00000323224 KIF21AQ7Z4S6 1674 aa35.33■■■■□ 3.25
TYMS-201ENST00000323224 THOC2Q8NI27 1593 aaKnown RBP35.33■■■■□ 3.25
TYMS-201ENST00000323224 CADPSQ9ULU8 1353 aa35.25■■■■□ 3.23
TYMS-201ENST00000323224 PDS5BQ9NTI5 1447 aa35.21■■■■□ 3.23
TYMS-201ENST00000323224 DNAJC5Q9H3Z4 198 aa35.16■■■■□ 3.22
TYMS-201ENST00000323224 TOP2AP11388 1531 aaKnown RBP35.15■■■■□ 3.22
TYMS-201ENST00000323224 MRC2Q9UBG0 1479 aa34.95■■■■□ 3.19
TYMS-201ENST00000323224 CFTRP13569 1480 aa34.94■■■■□ 3.18
TYMS-201ENST00000323224 FANCD2Q9BXW9 1451 aa34.88■■■■□ 3.17
TYMS-201ENST00000323224 CEP164Q9UPV0 1460 aa34.88■■■■□ 3.17
TYMS-201ENST00000323224 WDR62O43379 1518 aa34.87■■■■□ 3.17
TYMS-201ENST00000323224 CCDC88BA6NC98 1476 aa34.77■■■■□ 3.16
TYMS-201ENST00000323224 PRDM2Q13029 1718 aa34.66■■■■□ 3.14
TYMS-201ENST00000323224 URB2Q14146 1524 aaKnown RBP34.63■■■■□ 3.13
TYMS-201ENST00000323224 TOPBP1Q92547 1522 aa34.28■■■■□ 3.08
TYMS-201ENST00000323224 ZNF608Q9ULD9 1512 aaPredicted RBP34.17■■■■□ 3.06
TYMS-201ENST00000323224 DNMBPQ6XZF7 1577 aa34.17■■■■□ 3.06
TYMS-201ENST00000323224 IFT140Q96RY7 1462 aa34.14■■■■□ 3.06
TYMS-201ENST00000323224 ABCC8Q09428 1581 aa34.1■■■■□ 3.05
TYMS-201ENST00000323224 SUPT5HO00267 1087 aaKnown RBP34.08■■■■□ 3.05
TYMS-201ENST00000323224 TARBP1Q13395 1621 aaKnown RBP33.98■■■■□ 3.03
TYMS-201ENST00000323224 EIF4G3O43432 1585 aaKnown RBP33.97■■■■□ 3.03
TYMS-201ENST00000323224 POLA1P09884 1462 aaPredicted RBP33.95■■■■□ 3.03
TYMS-201ENST00000323224 OSCARQ8IYS5 282 aa33.95■■■■□ 3.03
TYMS-201ENST00000323224 AQRO60306 1485 aaKnown RBP eCLIP33.87■■■■□ 3.014e-7■■■■■ 33.1
TYMS-201ENST00000323224 RAD54L2Q9Y4B4 1467 aa33.86■■■■□ 3.01
TYMS-201ENST00000323224 CUX1P39880 1505 aa33.85■■■■□ 3.01
TYMS-201ENST00000323224 TRIM41Q8WV44 630 aa33.82■■■■□ 3.01
TYMS-201ENST00000323224 FGD5Q6ZNL6 1462 aa33.8■■■■□ 3
TYMS-201ENST00000323224 SOGA1O94964 1423 aa33.76■■■□□ 2.99
TYMS-201ENST00000323224 TDRD9Q8NDG6 1382 aaKnown RBP33.71■■■□□ 2.99
TYMS-201ENST00000323224 CHD1O14646 1710 aa33.68■■■□□ 2.98
TYMS-201ENST00000323224 RIMBP3CA6NJZ7 1639 aa33.59■■■□□ 2.97
TYMS-201ENST00000323224 RIMBP3BA6NNM3 1639 aa33.59■■■□□ 2.97
TYMS-201ENST00000323224 RIMBP3Q9UFD9 1639 aa33.59■■■□□ 2.97
TYMS-201ENST00000323224 WDR97A6NE52 1622 aa33.57■■■□□ 2.96
TYMS-201ENST00000323224 FBLN2P98095 1184 aa33.54■■■□□ 2.96
TYMS-201ENST00000323224 SNAPC4Q5SXM2 1469 aa33.52■■■□□ 2.96
TYMS-201ENST00000323224 ARHGEF11O15085 1522 aa33.49■■■□□ 2.95
TYMS-201ENST00000323224 GRIN2BQ13224 1484 aa33.42■■■□□ 2.94
TYMS-201ENST00000323224 PBRM1Q86U86 1689 aa33.39■■■□□ 2.94
TYMS-201ENST00000323224 ABCA10Q8WWZ4 1543 aa33.39■■■□□ 2.94
TYMS-201ENST00000323224 MAGI1Q96QZ7 1491 aaPredicted RBP33.38■■■□□ 2.93
TYMS-201ENST00000323224 SYNJ1O43426 1573 aa33.38■■■□□ 2.93
TYMS-201ENST00000323224 GAPVD1Q14C86 1478 aa33.37■■■□□ 2.93
TYMS-201ENST00000323224 BIVM-ERCC5R4GMW8 1640 aa33.36■■■□□ 2.93
TYMS-201ENST00000323224 ABCA5Q8WWZ7 1642 aa33.36■■■□□ 2.93
TYMS-201ENST00000323224 TOP2BQ02880 1626 aa33.34■■■□□ 2.93
TYMS-201ENST00000323224 WRNQ14191 1432 aaPredicted RBP eCLIP33.34■■■□□ 2.93
TYMS-201ENST00000323224 CHMP7Q8WUX9 453 aaPredicted RBP33.29■■■□□ 2.92
TYMS-201ENST00000323224 SYNJ2O15056 1496 aa33.28■■■□□ 2.92
TYMS-201ENST00000323224 CLASP1Q7Z460 1538 aa33.26■■■□□ 2.91
TYMS-201ENST00000323224 CYB5RLQ6IPT4 315 aa33.21■■■□□ 2.91
TYMS-201ENST00000323224 ARAP1Q96P48 1450 aa33.21■■■□□ 2.91
TYMS-201ENST00000323224 ADAMTS12P58397 1594 aa33.08■■■□□ 2.89
TYMS-201ENST00000323224 GRIN2AQ12879 1464 aa33.02■■■□□ 2.88
TYMS-201ENST00000323224 ERICH3Q5RHP9 1530 aa32.95■■■□□ 2.87
TYMS-201ENST00000323224 CEP170Q5SW79 1584 aa32.94■■■□□ 2.86
TYMS-201ENST00000323224 FHAD1B1AJZ9 1412 aa32.93■■■□□ 2.86
TYMS-201ENST00000323224 NUP160Q12769 1436 aa32.9■■■□□ 2.86
TYMS-201ENST00000323224 ERCC6L2Q5T890 1561 aa32.86■■■□□ 2.85
TYMS-201ENST00000323224 SHROOM2Q13796 1616 aa32.74■■■□□ 2.83
TYMS-201ENST00000323224 TRHP20396 242 aaPredicted RBP32.7■■■□□ 2.82
TYMS-201ENST00000323224 KIF27Q86VH2 1401 aa32.65■■■□□ 2.82
TYMS-201ENST00000323224 IGF1RP08069 1367 aa32.64■■■□□ 2.82
TYMS-201ENST00000323224 RUSC2Q8N2Y8 1516 aa32.62■■■□□ 2.81
TYMS-201ENST00000323224 PRG4Q92954 1404 aaPredicted RBP32.55■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms