RNA–Protein interactions for RNA: ENST00000334828.5

PGAM1-201, Transcript of phosphoglycerate mutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGAM1, Length 1,830 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM1-201ENST00000334828 NISCHQ9Y2I1 1504 aa43.88■■■■■ 4.61
PGAM1-201ENST00000334828 CCDC180Q9P1Z9 1646 aa38.67■■■■□ 3.78
PGAM1-201ENST00000334828 ABCC9O60706 1549 aa37.28■■■■□ 3.56
PGAM1-201ENST00000334828 ZCCHC6Q5VYS8 1495 aaKnown RBP36.66■■■■□ 3.46
PGAM1-201ENST00000334828 DCAF8L2P0C7V8 631 aa36.46■■■■□ 3.43
PGAM1-201ENST00000334828 DCAF1Q9Y4B6 1507 aa36.37■■■■□ 3.41
PGAM1-201ENST00000334828 MYO15BQ96JP2 1530 aa36.33■■■■□ 3.41
PGAM1-201ENST00000334828 NACADO15069 1562 aa36.29■■■■□ 3.4
PGAM1-201ENST00000334828 RB1CC1Q8TDY2 1594 aa36.15■■■■□ 3.38
PGAM1-201ENST00000334828 SCRIBQ14160 1630 aa35.31■■■■□ 3.24
PGAM1-201ENST00000334828 UNC13AQ9UPW8 1703 aa35.16■■■■□ 3.22
PGAM1-201ENST00000334828 PABPN1Q86U42 306 aaKnown RBP eCLIP34.99■■■■□ 3.19
PGAM1-201ENST00000334828 SHROOM4Q9ULL8 1493 aa34.99■■■■□ 3.19
PGAM1-201ENST00000334828 BICRAQ9NZM4 1560 aa34.99■■■■□ 3.19
PGAM1-201ENST00000334828 CECR2Q9BXF3 1484 aa34.08■■■■□ 3.05
PGAM1-201ENST00000334828 EIF4G1Q04637 1599 aaKnown RBP34.04■■■■□ 3.04
PGAM1-201ENST00000334828 BAZ1AQ9NRL2 1556 aaPredicted RBP33.97■■■■□ 3.03
PGAM1-201ENST00000334828 SMARCA4P51532 1647 aa33.86■■■■□ 3.01
PGAM1-201ENST00000334828 MROH2BQ7Z745 1585 aa33.79■■■■□ 3
PGAM1-201ENST00000334828 CC2D2AQ9P2K1 1620 aa33.72■■■□□ 2.99
PGAM1-201ENST00000334828 DNAJC5BQ9UF47 199 aa33.71■■■□□ 2.99
PGAM1-201ENST00000334828 RSF1Q96T23 1441 aaPredicted RBP33.69■■■□□ 2.98
PGAM1-201ENST00000334828 ATAD2BQ9ULI0 1458 aa33.59■■■□□ 2.97
PGAM1-201ENST00000334828 SMARCA2P51531 1590 aa33.58■■■□□ 2.97
PGAM1-201ENST00000334828 PEG3Q9GZU2 1588 aa33.57■■■□□ 2.96
PGAM1-201ENST00000334828 NCAPD3P42695 1498 aa33.52■■■□□ 2.96
PGAM1-201ENST00000334828 WIZO95785 1651 aa33.4■■■□□ 2.94
PGAM1-201ENST00000334828 HMGXB3Q12766 1538 aa33.35■■■□□ 2.93
PGAM1-201ENST00000334828 BAZ1BQ9UIG0 1483 aaKnown RBP33.34■■■□□ 2.93
PGAM1-201ENST00000334828 SUPT5HO00267 1087 aaKnown RBP33.3■■■□□ 2.92
PGAM1-201ENST00000334828 TOP2AP11388 1531 aaKnown RBP33.15■■■□□ 2.9
PGAM1-201ENST00000334828 CCDC88BA6NC98 1476 aa32.79■■■□□ 2.84
PGAM1-201ENST00000334828 CADPSQ9ULU8 1353 aa32.59■■■□□ 2.81
PGAM1-201ENST00000334828 CFTRP13569 1480 aa32.5■■■□□ 2.79
PGAM1-201ENST00000334828 LAMC3Q9Y6N6 1575 aa32.48■■■□□ 2.79
PGAM1-201ENST00000334828 NESP48681 1621 aa32.42■■■□□ 2.78
PGAM1-201ENST00000334828 PDS5BQ9NTI5 1447 aa32.32■■■□□ 2.76
PGAM1-201ENST00000334828 CHIC1Q5VXU3 224 aa32.16■■■□□ 2.74
PGAM1-201ENST00000334828 FANCD2Q9BXW9 1451 aa32.16■■■□□ 2.74
PGAM1-201ENST00000334828 ERCC6Q03468 1493 aa32.13■■■□□ 2.73
PGAM1-201ENST00000334828 PRDM2Q13029 1718 aa32.11■■■□□ 2.73
PGAM1-201ENST00000334828 CEP164Q9UPV0 1460 aa32.06■■■□□ 2.72
PGAM1-201ENST00000334828 KIF21AQ7Z4S6 1674 aa31.98■■■□□ 2.71
PGAM1-201ENST00000334828 MRC2Q9UBG0 1479 aa31.89■■■□□ 2.69
PGAM1-201ENST00000334828 ABCC8Q09428 1581 aa31.81■■■□□ 2.68
PGAM1-201ENST00000334828 THOC2Q8NI27 1593 aaKnown RBP31.77■■■□□ 2.68
PGAM1-201ENST00000334828 URB2Q14146 1524 aaKnown RBP31.76■■■□□ 2.68
PGAM1-201ENST00000334828 WRNQ14191 1432 aaPredicted RBP eCLIP31.75■■■□□ 2.67
PGAM1-201ENST00000334828 WDR62O43379 1518 aa31.73■■■□□ 2.67
PGAM1-201ENST00000334828 DNMBPQ6XZF7 1577 aa31.69■■■□□ 2.66
PGAM1-201ENST00000334828 TOPBP1Q92547 1522 aa31.69■■■□□ 2.66
PGAM1-201ENST00000334828 CUX1P39880 1505 aa31.66■■■□□ 2.66
PGAM1-201ENST00000334828 CUX2O14529 1486 aa31.59■■■□□ 2.65
PGAM1-201ENST00000334828 TOP2BQ02880 1626 aa31.56■■■□□ 2.64
PGAM1-201ENST00000334828 SYNJ1O43426 1573 aa31.54■■■□□ 2.64
PGAM1-201ENST00000334828 BIVM-ERCC5R4GMW8 1640 aa31.51■■■□□ 2.63
PGAM1-201ENST00000334828 POLA1P09884 1462 aaPredicted RBP31.48■■■□□ 2.63
PGAM1-201ENST00000334828 FGD5Q6ZNL6 1462 aa31.48■■■□□ 2.63
PGAM1-201ENST00000334828 TRIM41Q8WV44 630 aa31.47■■■□□ 2.63
PGAM1-201ENST00000334828 SOGA1O94964 1423 aa31.4■■■□□ 2.62
PGAM1-201ENST00000334828 IFT140Q96RY7 1462 aa31.39■■■□□ 2.62
PGAM1-201ENST00000334828 RAD54L2Q9Y4B4 1467 aa31.32■■■□□ 2.6
PGAM1-201ENST00000334828 TARBP1Q13395 1621 aaKnown RBP31.26■■■□□ 2.59
PGAM1-201ENST00000334828 ABCA10Q8WWZ4 1543 aa31.24■■■□□ 2.59
PGAM1-201ENST00000334828 TDRD9Q8NDG6 1382 aaKnown RBP31.13■■■□□ 2.57
PGAM1-201ENST00000334828 ZNF608Q9ULD9 1512 aaPredicted RBP31.13■■■□□ 2.57
PGAM1-201ENST00000334828 WDR97A6NE52 1622 aa31.11■■■□□ 2.57
PGAM1-201ENST00000334828 AQRO60306 1485 aaKnown RBP eCLIP31.07■■■□□ 2.563e-7■■■■□ 22.7
PGAM1-201ENST00000334828 KIF27Q86VH2 1401 aa31.07■■■□□ 2.56
PGAM1-201ENST00000334828 GAPVD1Q14C86 1478 aa31.03■■■□□ 2.56
PGAM1-201ENST00000334828 EIF4G3O43432 1585 aaKnown RBP30.99■■■□□ 2.55
PGAM1-201ENST00000334828 ABCA5Q8WWZ7 1642 aa30.98■■■□□ 2.55
PGAM1-201ENST00000334828 LOC105371045A0A1W2PR82 267 aa30.97■■■□□ 2.55
PGAM1-201ENST00000334828 GRIN2BQ13224 1484 aa30.96■■■□□ 2.55
PGAM1-201ENST00000334828 EEA1Q15075 1411 aa30.9■■■□□ 2.54
PGAM1-201ENST00000334828 ERICH3Q5RHP9 1530 aa30.87■■■□□ 2.53
PGAM1-201ENST00000334828 RUSC2Q8N2Y8 1516 aa30.87■■■□□ 2.53
PGAM1-201ENST00000334828 IGF1RP08069 1367 aa30.87■■■□□ 2.53
PGAM1-201ENST00000334828 MAGI1Q96QZ7 1491 aaPredicted RBP30.81■■■□□ 2.52
PGAM1-201ENST00000334828 CSRNP3Q8WYN3 585 aa30.79■■■□□ 2.52
PGAM1-201ENST00000334828 SNAPC4Q5SXM2 1469 aa30.78■■■□□ 2.52
PGAM1-201ENST00000334828 PBRM1Q86U86 1689 aa30.78■■■□□ 2.52
PGAM1-201ENST00000334828 FAM9AQ8IZU1 332 aaPredicted RBP30.73■■■□□ 2.51
PGAM1-201ENST00000334828 FHAD1B1AJZ9 1412 aa30.72■■■□□ 2.51
PGAM1-201ENST00000334828 CARMIL1Q5VZK9 1371 aa30.7■■■□□ 2.51
PGAM1-201ENST00000334828 SYNJ2O15056 1496 aa30.67■■■□□ 2.5
PGAM1-201ENST00000334828 CHMP7Q8WUX9 453 aaPredicted RBP30.67■■■□□ 2.5
PGAM1-201ENST00000334828 CUL7Q14999 1698 aa30.65■■■□□ 2.5
PGAM1-201ENST00000334828 ADAMTS12P58397 1594 aa30.64■■■□□ 2.49
PGAM1-201ENST00000334828 FBLN2P98095 1184 aa30.61■■■□□ 2.49
PGAM1-201ENST00000334828 PRXQ9BXM0 1461 aa30.6■■■□□ 2.49
PGAM1-201ENST00000334828 RAPGEF2Q9Y4G8 1499 aa30.56■■■□□ 2.48
PGAM1-201ENST00000334828 GRIN2AQ12879 1464 aa30.53■■■□□ 2.48
PGAM1-201ENST00000334828 OSCARQ8IYS5 282 aa30.47■■■□□ 2.47
PGAM1-201ENST00000334828 KIF21BO75037 1637 aa30.42■■■□□ 2.46
PGAM1-201ENST00000334828 CHD1O14646 1710 aa30.42■■■□□ 2.46
PGAM1-201ENST00000334828 NUP160Q12769 1436 aa30.39■■■□□ 2.46
PGAM1-201ENST00000334828 GOLGA3Q08378 1498 aa30.35■■■□□ 2.45
PGAM1-201ENST00000334828 PCGF6Q9BYE7 350 aa30.31■■■□□ 2.44
PGAM1-201ENST00000334828 CEP170Q5SW79 1584 aa30.29■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms