RNA–Protein interactions for RNA: ENST00000310128.8

KCNE3-201, Transcript of potassium voltage-gated channel subfamily E regulatory subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCNE3, Length 3,143 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNE3-201ENST00000310128 NISCHQ9Y2I1 1504 aa36.95■■■■□ 3.51
KCNE3-201ENST00000310128 SHROOM4Q9ULL8 1493 aa32.23■■■□□ 2.75
KCNE3-201ENST00000310128 DCAF8L2P0C7V8 631 aa32.06■■■□□ 2.72
KCNE3-201ENST00000310128 SUPT5HO00267 1087 aaKnown RBP31.38■■■□□ 2.61
KCNE3-201ENST00000310128 CCDC180Q9P1Z9 1646 aa31.14■■■□□ 2.57
KCNE3-201ENST00000310128 ZCCHC6Q5VYS8 1495 aaKnown RBP31.06■■■□□ 2.56
KCNE3-201ENST00000310128 ABCC9O60706 1549 aa30.32■■■□□ 2.44
KCNE3-201ENST00000310128 SCRIBQ14160 1630 aa29.91■■■□□ 2.38
KCNE3-201ENST00000310128 DCAF1Q9Y4B6 1507 aa29.81■■■□□ 2.36
KCNE3-201ENST00000310128 CHIC1Q5VXU3 224 aa29.8■■■□□ 2.36
KCNE3-201ENST00000310128 MYO15BQ96JP2 1530 aa29.55■■■□□ 2.32
KCNE3-201ENST00000310128 EHMT2Q96KQ7 1210 aa29.38■■■□□ 2.29
KCNE3-201ENST00000310128 LOC105371045A0A1W2PR82 267 aa29.34■■■□□ 2.29
KCNE3-201ENST00000310128 RSF1Q96T23 1441 aaPredicted RBP29.27■■■□□ 2.28
KCNE3-201ENST00000310128 CECR2Q9BXF3 1484 aa29.26■■■□□ 2.27
KCNE3-201ENST00000310128 PABPN1Q86U42 306 aaKnown RBP eCLIP29.23■■■□□ 2.27
KCNE3-201ENST00000310128 FAM9AQ8IZU1 332 aaPredicted RBP29.2■■■□□ 2.26
KCNE3-201ENST00000310128 NACADO15069 1562 aa29.12■■■□□ 2.25
KCNE3-201ENST00000310128 MROH2BQ7Z745 1585 aa28.94■■■□□ 2.22
KCNE3-201ENST00000310128 TRIM41Q8WV44 630 aa28.94■■■□□ 2.22
KCNE3-201ENST00000310128 RB1CC1Q8TDY2 1594 aa28.93■■■□□ 2.22
KCNE3-201ENST00000310128 PCGF6Q9BYE7 350 aa28.78■■■□□ 2.2
KCNE3-201ENST00000310128 WIZO95785 1651 aa28.74■■■□□ 2.19
KCNE3-201ENST00000310128 PPARGC1BQ86YN6 1023 aaKnown RBP28.42■■■□□ 2.14
KCNE3-201ENST00000310128 UNC13AQ9UPW8 1703 aa28.42■■■□□ 2.14
KCNE3-201ENST00000310128 BAZ1AQ9NRL2 1556 aaPredicted RBP28.34■■■□□ 2.13
KCNE3-201ENST00000310128 TTBK1Q5TCY1 1321 aaPredicted RBP28.2■■■□□ 2.1
KCNE3-201ENST00000310128 BICRAQ9NZM4 1560 aa28.2■■■□□ 2.1
KCNE3-201ENST00000310128 SMARCA4P51532 1647 aa28.2■■■□□ 2.1
KCNE3-201ENST00000310128 CCDC88BA6NC98 1476 aa28.16■■■□□ 2.1
KCNE3-201ENST00000310128 ABCC8Q09428 1581 aa28.15■■■□□ 2.1
KCNE3-201ENST00000310128 TOP2AP11388 1531 aaKnown RBP27.99■■■□□ 2.07
KCNE3-201ENST00000310128 HRCP23327 699 aa27.97■■■□□ 2.07
KCNE3-201ENST00000310128 RANGAP1P46060 587 aaPredicted RBP27.93■■■□□ 2.06
KCNE3-201ENST00000310128 SMARCA2P51531 1590 aa27.93■■■□□ 2.06
KCNE3-201ENST00000310128 TRIM26Q12899 539 aaPredicted RBP27.85■■■□□ 2.05
KCNE3-201ENST00000310128 SOGA1O94964 1423 aa27.84■■■□□ 2.05
KCNE3-201ENST00000310128 UBTFP17480 764 aaKnown RBP27.78■■■□□ 2.04
KCNE3-201ENST00000310128 RUSC2Q8N2Y8 1516 aa27.77■■■□□ 2.04
KCNE3-201ENST00000310128 ATAD2BQ9ULI0 1458 aa27.75■■■□□ 2.03
KCNE3-201ENST00000310128 BAZ1BQ9UIG0 1483 aaKnown RBP27.71■■■□□ 2.03
KCNE3-201ENST00000310128 EIF4G1Q04637 1599 aaKnown RBP27.69■■■□□ 2.02
KCNE3-201ENST00000310128 CSRNP3Q8WYN3 585 aa27.58■■■□□ 2.01
KCNE3-201ENST00000310128 WRNQ14191 1432 aaPredicted RBP eCLIP27.54■■■□□ 2
KCNE3-201ENST00000310128 SYNJ1O43426 1573 aa27.35■■□□□ 1.97
KCNE3-201ENST00000310128 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.35■■□□□ 1.97
KCNE3-201ENST00000310128 PEG3Q9GZU2 1588 aa27.34■■□□□ 1.97
KCNE3-201ENST00000310128 CEP162Q5TB80 1403 aa27.32■■□□□ 1.96
KCNE3-201ENST00000310128 DNAJC5BQ9UF47 199 aa27.18■■□□□ 1.94
KCNE3-201ENST00000310128 NCAPD3P42695 1498 aa27.11■■□□□ 1.93
KCNE3-201ENST00000310128 TNIKQ9UKE5 1360 aa27.1■■□□□ 1.93
KCNE3-201ENST00000310128 CCER1Q8TC90 406 aaPredicted RBP27.08■■□□□ 1.93
KCNE3-201ENST00000310128 RAPGEF2Q9Y4G8 1499 aa27.07■■□□□ 1.92
KCNE3-201ENST00000310128 GOLGA3Q08378 1498 aa27.04■■□□□ 1.92
KCNE3-201ENST00000310128 HNRNPUL2Q1KMD3 747 aaKnown RBP27.03■■□□□ 1.92
KCNE3-201ENST00000310128 EEA1Q15075 1411 aa26.96■■□□□ 1.91
KCNE3-201ENST00000310128 CLIP1P30622 1438 aa26.93■■□□□ 1.9
KCNE3-201ENST00000310128 CEP164Q9UPV0 1460 aa26.9■■□□□ 1.9
KCNE3-201ENST00000310128 CUX1P39880 1505 aa26.9■■□□□ 1.9
KCNE3-201ENST00000310128 CC2D2AQ9P2K1 1620 aa26.9■■□□□ 1.9
KCNE3-201ENST00000310128 APLP2Q06481 763 aa26.89■■□□□ 1.9
KCNE3-201ENST00000310128 HMGXB3Q12766 1538 aa26.88■■□□□ 1.89
KCNE3-201ENST00000310128 CFTRP13569 1480 aa26.83■■□□□ 1.89
KCNE3-201ENST00000310128 NESP48681 1621 aa26.83■■□□□ 1.88
KCNE3-201ENST00000310128 P3H3Q8IVL6 736 aa26.83■■□□□ 1.88
KCNE3-201ENST00000310128 TOP2BQ02880 1626 aa26.81■■□□□ 1.88
KCNE3-201ENST00000310128 CADPSQ9ULU8 1353 aa26.8■■□□□ 1.88
KCNE3-201ENST00000310128 ATP1B4Q9UN42 357 aaPredicted RBP26.77■■□□□ 1.88
KCNE3-201ENST00000310128 ZEB1P37275 1124 aaPredicted RBP26.73■■□□□ 1.87
KCNE3-201ENST00000310128 CUX2O14529 1486 aa26.71■■□□□ 1.87
KCNE3-201ENST00000310128 ITGAEP38570 1179 aa26.69■■□□□ 1.86
KCNE3-201ENST00000310128 KIF27Q86VH2 1401 aa26.68■■□□□ 1.86
KCNE3-201ENST00000310128 KANK4Q5T7N3 995 aaPredicted RBP26.68■■□□□ 1.86
KCNE3-201ENST00000310128 KIF21BO75037 1637 aa26.61■■□□□ 1.85
KCNE3-201ENST00000310128 RAD54L2Q9Y4B4 1467 aa26.6■■□□□ 1.85
KCNE3-201ENST00000310128 FGD5Q6ZNL6 1462 aa26.58■■□□□ 1.85
KCNE3-201ENST00000310128 FANCD2Q9BXW9 1451 aa26.57■■□□□ 1.84
KCNE3-201ENST00000310128 VPS8Q8N3P4 1428 aa26.57■■□□□ 1.84
KCNE3-201ENST00000310128 BIVM-ERCC5R4GMW8 1640 aa26.57■■□□□ 1.84
KCNE3-201ENST00000310128 PRXQ9BXM0 1461 aa26.54■■□□□ 1.84
KCNE3-201ENST00000310128 IGF1RP08069 1367 aa26.53■■□□□ 1.84
KCNE3-201ENST00000310128 ARAP1Q96P48 1450 aa26.47■■□□□ 1.83
KCNE3-201ENST00000310128 CARMIL1Q5VZK9 1371 aa26.46■■□□□ 1.83
KCNE3-201ENST00000310128 TDRD9Q8NDG6 1382 aaKnown RBP26.45■■□□□ 1.82
KCNE3-201ENST00000310128 ARID3CA6NKF2 412 aa26.34■■□□□ 1.81
KCNE3-201ENST00000310128 ARHGAP35Q9NRY4 1499 aa26.3■■□□□ 1.8
KCNE3-201ENST00000310128 POLA1P09884 1462 aaPredicted RBP26.29■■□□□ 1.8
KCNE3-201ENST00000310128 TOPBP1Q92547 1522 aa26.27■■□□□ 1.8
KCNE3-201ENST00000310128 ERICH3Q5RHP9 1530 aa26.26■■□□□ 1.79
KCNE3-201ENST00000310128 FAM50AQ14320 339 aaKnown RBP26.21■■□□□ 1.79
KCNE3-201ENST00000310128 URB2Q14146 1524 aaKnown RBP26.19■■□□□ 1.78
KCNE3-201ENST00000310128 FHOD3Q2V2M9 1422 aa26.19■■□□□ 1.78
KCNE3-201ENST00000310128 DIEXFQ68CQ4 756 aaKnown RBP26.14■■□□□ 1.77
KCNE3-201ENST00000310128 PRDM2Q13029 1718 aa26.09■■□□□ 1.77
KCNE3-201ENST00000310128 DNMBPQ6XZF7 1577 aa26.08■■□□□ 1.77
KCNE3-201ENST00000310128 PDS5BQ9NTI5 1447 aa26.05■■□□□ 1.76
KCNE3-201ENST00000310128 AQRO60306 1485 aaKnown RBP eCLIP26.03■■□□□ 1.76
KCNE3-201ENST00000310128 FBLN2P98095 1184 aa26.01■■□□□ 1.75
KCNE3-201ENST00000310128 ABCA10Q8WWZ4 1543 aa25.99■■□□□ 1.75
KCNE3-201ENST00000310128 YTHDC1Q96MU7 727 aaKnown RBP25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms