RNA–Protein interactions for RNA: ENST00000566866.5

EIF3C-211, Transcript of eukaryotic translation initiation factor 3 subunit C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3C, Length 2,986 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3C-211ENST00000566866 NISCHQ9Y2I1 1504 aa36.86■■■■□ 3.49
EIF3C-211ENST00000566866 SHROOM4Q9ULL8 1493 aa32.14■■■□□ 2.74
EIF3C-211ENST00000566866 DCAF8L2P0C7V8 631 aa31.59■■■□□ 2.65
EIF3C-211ENST00000566866 SUPT5HO00267 1087 aaKnown RBP31.5■■■□□ 2.63
EIF3C-211ENST00000566866 ZCCHC6Q5VYS8 1495 aaKnown RBP31.07■■■□□ 2.57
EIF3C-211ENST00000566866 CCDC180Q9P1Z9 1646 aa31.01■■■□□ 2.55
EIF3C-211ENST00000566866 CHIC1Q5VXU3 224 aa30.22■■■□□ 2.43
EIF3C-211ENST00000566866 MYO15BQ96JP2 1530 aa30.02■■■□□ 2.4
EIF3C-211ENST00000566866 DCAF1Q9Y4B6 1507 aa29.87■■■□□ 2.37
EIF3C-211ENST00000566866 HRCP23327 699 aa29.71■■■□□ 2.35
EIF3C-211ENST00000566866 SCRIBQ14160 1630 aa29.63■■■□□ 2.33
EIF3C-211ENST00000566866 LOC105371045A0A1W2PR82 267 aa29.63■■■□□ 2.33
EIF3C-211ENST00000566866 ABCC9O60706 1549 aa29.59■■■□□ 2.33
EIF3C-211ENST00000566866 PCGF6Q9BYE7 350 aa29.49■■■□□ 2.31
EIF3C-211ENST00000566866 PPARGC1BQ86YN6 1023 aaKnown RBP29.35■■■□□ 2.29
EIF3C-211ENST00000566866 EHMT2Q96KQ7 1210 aa29.3■■■□□ 2.28
EIF3C-211ENST00000566866 RSF1Q96T23 1441 aaPredicted RBP29.28■■■□□ 2.28
EIF3C-211ENST00000566866 FAM9AQ8IZU1 332 aaPredicted RBP29.25■■■□□ 2.27
EIF3C-211ENST00000566866 TRIM41Q8WV44 630 aa29.13■■■□□ 2.25
EIF3C-211ENST00000566866 CECR2Q9BXF3 1484 aa29.03■■■□□ 2.24
EIF3C-211ENST00000566866 RB1CC1Q8TDY2 1594 aa28.97■■■□□ 2.23
EIF3C-211ENST00000566866 NACADO15069 1562 aa28.87■■■□□ 2.21
EIF3C-211ENST00000566866 MROH2BQ7Z745 1585 aa28.81■■■□□ 2.2
EIF3C-211ENST00000566866 PELP1Q8IZL8 1130 aaKnown RBP28.74■■■□□ 2.19
EIF3C-211ENST00000566866 WIZO95785 1651 aa28.63■■■□□ 2.17
EIF3C-211ENST00000566866 TRIM26Q12899 539 aaPredicted RBP28.62■■■□□ 2.17
EIF3C-211ENST00000566866 PABPN1Q86U42 306 aaKnown RBP eCLIP28.54■■■□□ 2.16
EIF3C-211ENST00000566866 SCAF1Q9H7N4 1312 aaKnown RBP28.29■■■□□ 2.12
EIF3C-211ENST00000566866 BAZ1AQ9NRL2 1556 aaPredicted RBP28.27■■■□□ 2.12
EIF3C-211ENST00000566866 TTBK1Q5TCY1 1321 aaPredicted RBP28.25■■■□□ 2.11
EIF3C-211ENST00000566866 ABCC8Q09428 1581 aa28.12■■■□□ 2.09
EIF3C-211ENST00000566866 CCDC88BA6NC98 1476 aa28.09■■■□□ 2.09
EIF3C-211ENST00000566866 SMARCA4P51532 1647 aa28.05■■■□□ 2.08
EIF3C-211ENST00000566866 UNC13AQ9UPW8 1703 aa28.02■■■□□ 2.08
EIF3C-211ENST00000566866 TOP2AP11388 1531 aaKnown RBP27.98■■■□□ 2.07
EIF3C-211ENST00000566866 SMARCA2P51531 1590 aa27.89■■■□□ 2.06
EIF3C-211ENST00000566866 UBTFP17480 764 aaKnown RBP27.89■■■□□ 2.05
EIF3C-211ENST00000566866 SOGA1O94964 1423 aa27.89■■■□□ 2.05
EIF3C-211ENST00000566866 EIF4G1Q04637 1599 aaKnown RBP27.85■■■□□ 2.05
EIF3C-211ENST00000566866 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.84■■■□□ 2.05
EIF3C-211ENST00000566866 ZEB1P37275 1124 aaPredicted RBP27.78■■■□□ 2.04
EIF3C-211ENST00000566866 RUSC2Q8N2Y8 1516 aa27.77■■■□□ 2.04
EIF3C-211ENST00000566866 BICRAQ9NZM4 1560 aa27.77■■■□□ 2.04
EIF3C-211ENST00000566866 RANGAP1P46060 587 aaPredicted RBP27.75■■■□□ 2.03
EIF3C-211ENST00000566866 CSRNP3Q8WYN3 585 aa27.72■■■□□ 2.03
EIF3C-211ENST00000566866 CCER1Q8TC90 406 aaPredicted RBP27.68■■■□□ 2.02
EIF3C-211ENST00000566866 CEP162Q5TB80 1403 aa27.61■■■□□ 2.01
EIF3C-211ENST00000566866 MYT1Q01538 1121 aa27.58■■■□□ 2.01
EIF3C-211ENST00000566866 WRNQ14191 1432 aaPredicted RBP eCLIP27.56■■■□□ 2
EIF3C-211ENST00000566866 NEUROD1Q13562 356 aa27.49■■□□□ 1.99
EIF3C-211ENST00000566866 ACIN1Q9UKV3 1341 aaKnown RBP27.49■■□□□ 1.99
EIF3C-211ENST00000566866 ATAD2BQ9ULI0 1458 aa27.47■■□□□ 1.99
EIF3C-211ENST00000566866 BAZ1BQ9UIG0 1483 aaKnown RBP27.47■■□□□ 1.99
EIF3C-211ENST00000566866 TNIKQ9UKE5 1360 aa27.44■■□□□ 1.98
EIF3C-211ENST00000566866 GTF3C3Q9Y5Q9 886 aa27.38■■□□□ 1.97
EIF3C-211ENST00000566866 SYNJ1O43426 1573 aa27.34■■□□□ 1.97
EIF3C-211ENST00000566866 GOLGA3Q08378 1498 aa27.31■■□□□ 1.96
EIF3C-211ENST00000566866 EEA1Q15075 1411 aa27.3■■□□□ 1.96
EIF3C-211ENST00000566866 HNRNPUL2Q1KMD3 747 aaKnown RBP27.3■■□□□ 1.96
EIF3C-211ENST00000566866 PEG3Q9GZU2 1588 aa27.27■■□□□ 1.96
EIF3C-211ENST00000566866 APLP2Q06481 763 aa27.16■■□□□ 1.94
EIF3C-211ENST00000566866 CLIP1P30622 1438 aa27.15■■□□□ 1.94
EIF3C-211ENST00000566866 CEP164Q9UPV0 1460 aa27.13■■□□□ 1.93
EIF3C-211ENST00000566866 RAPGEF2Q9Y4G8 1499 aa27.13■■□□□ 1.93
EIF3C-211ENST00000566866 CENPBP07199 599 aaPredicted RBP27.1■■□□□ 1.93
EIF3C-211ENST00000566866 DIEXFQ68CQ4 756 aaKnown RBP26.99■■□□□ 1.91
EIF3C-211ENST00000566866 KIF21BO75037 1637 aa26.89■■□□□ 1.9
EIF3C-211ENST00000566866 VPS8Q8N3P4 1428 aa26.88■■□□□ 1.89
EIF3C-211ENST00000566866 TOP2BQ02880 1626 aa26.84■■□□□ 1.89
EIF3C-211ENST00000566866 NCAPD3P42695 1498 aa26.84■■□□□ 1.89
EIF3C-211ENST00000566866 YTHDC1Q96MU7 727 aaKnown RBP26.79■■□□□ 1.88
EIF3C-211ENST00000566866 KANK4Q5T7N3 995 aaPredicted RBP26.78■■□□□ 1.88
EIF3C-211ENST00000566866 CUX1P39880 1505 aa26.77■■□□□ 1.88
EIF3C-211ENST00000566866 ITGAEP38570 1179 aa26.76■■□□□ 1.87
EIF3C-211ENST00000566866 KIF27Q86VH2 1401 aa26.69■■□□□ 1.86
EIF3C-211ENST00000566866 ZNF316A6NFI3 1004 aaPredicted RBP26.69■■□□□ 1.86
EIF3C-211ENST00000566866 HMGXB3Q12766 1538 aa26.68■■□□□ 1.86
EIF3C-211ENST00000566866 PRXQ9BXM0 1461 aa26.65■■□□□ 1.86
EIF3C-211ENST00000566866 CFTRP13569 1480 aa26.64■■□□□ 1.86
EIF3C-211ENST00000566866 BIVM-ERCC5R4GMW8 1640 aa26.63■■□□□ 1.85
EIF3C-211ENST00000566866 ATP1B4Q9UN42 357 aaPredicted RBP26.63■■□□□ 1.85
EIF3C-211ENST00000566866 P3H3Q8IVL6 736 aa26.62■■□□□ 1.85
EIF3C-211ENST00000566866 ARAP1Q96P48 1450 aa26.59■■□□□ 1.85
EIF3C-211ENST00000566866 CUX2O14529 1486 aa26.57■■□□□ 1.84
EIF3C-211ENST00000566866 CADPSQ9ULU8 1353 aa26.5■■□□□ 1.83
EIF3C-211ENST00000566866 ERICH3Q5RHP9 1530 aa26.48■■□□□ 1.83
EIF3C-211ENST00000566866 IGF1RP08069 1367 aa26.46■■□□□ 1.83
EIF3C-211ENST00000566866 MIER1Q8N108 512 aa26.45■■□□□ 1.82
EIF3C-211ENST00000566866 ARHGAP35Q9NRY4 1499 aa26.4■■□□□ 1.82
EIF3C-211ENST00000566866 CARMIL1Q5VZK9 1371 aa26.4■■□□□ 1.82
EIF3C-211ENST00000566866 FGD5Q6ZNL6 1462 aa26.38■■□□□ 1.81
EIF3C-211ENST00000566866 CC2D2AQ9P2K1 1620 aa26.34■■□□□ 1.81
EIF3C-211ENST00000566866 FAM50AQ14320 339 aaKnown RBP26.31■■□□□ 1.8
EIF3C-211ENST00000566866 DHX57Q6P158 1386 aaKnown RBP26.3■■□□□ 1.8
EIF3C-211ENST00000566866 NESP48681 1621 aa26.3■■□□□ 1.8
EIF3C-211ENST00000566866 RAD54L2Q9Y4B4 1467 aa26.29■■□□□ 1.8
EIF3C-211ENST00000566866 DNAJC5BQ9UF47 199 aa26.28■■□□□ 1.8
EIF3C-211ENST00000566866 FANCD2Q9BXW9 1451 aa26.27■■□□□ 1.8
EIF3C-211ENST00000566866 CCNB3Q8WWL7 1395 aa26.26■■□□□ 1.79
EIF3C-211ENST00000566866 RRBP1Q9P2E9 1410 aaKnown RBP26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms