Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
MACF1Q9UPN3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
MACF1Q9UPN3 AC110285.6-201ENST00000617652 491 ntBASIC10.83□□□□□ -0.68
MACF1Q9UPN3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
MACF1Q9UPN3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
MACF1Q9UPN3 AC133561.4-201ENST00000566112 224 ntBASIC10.82□□□□□ -0.68
MACF1Q9UPN3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
MACF1Q9UPN3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC10.82□□□□□ -0.68
MACF1Q9UPN3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
MACF1Q9UPN3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC10.82□□□□□ -0.68
MACF1Q9UPN3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
MACF1Q9UPN3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
MACF1Q9UPN3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC10.82□□□□□ -0.68
MACF1Q9UPN3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
MACF1Q9UPN3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC10.82□□□□□ -0.68
MACF1Q9UPN3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC10.81□□□□□ -0.68
MACF1Q9UPN3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC10.81□□□□□ -0.68
MACF1Q9UPN3 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC10.81□□□□□ -0.68
MACF1Q9UPN3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC10.81□□□□□ -0.68
MACF1Q9UPN3 KRT125P-201ENST00000546827 989 ntBASIC10.81□□□□□ -0.68
MACF1Q9UPN3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
MACF1Q9UPN3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC10.81□□□□□ -0.68
MACF1Q9UPN3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
MACF1Q9UPN3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
MACF1Q9UPN3 AC096631.2-201ENST00000436136 790 ntBASIC10.81□□□□□ -0.68
MACF1Q9UPN3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
MACF1Q9UPN3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
MACF1Q9UPN3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
MACF1Q9UPN3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC10.8□□□□□ -0.68
MACF1Q9UPN3 ILK-212ENST00000532063 1617 ntTSL 2 BASIC10.8□□□□□ -0.68
MACF1Q9UPN3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
MACF1Q9UPN3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC10.8□□□□□ -0.68
MACF1Q9UPN3 MIR4787-201ENST00000607364 84 ntBASIC10.8□□□□□ -0.68
MACF1Q9UPN3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC10.8□□□□□ -0.68
MACF1Q9UPN3 KRT16P3-201ENST00000439127 1283 ntBASIC10.8□□□□□ -0.68
MACF1Q9UPN3 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC10.8□□□□□ -0.68
MACF1Q9UPN3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
MACF1Q9UPN3 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
MACF1Q9UPN3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
MACF1Q9UPN3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC10.79□□□□□ -0.68
MACF1Q9UPN3 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
MACF1Q9UPN3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC10.79□□□□□ -0.68
MACF1Q9UPN3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC10.79□□□□□ -0.68
MACF1Q9UPN3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC10.79□□□□□ -0.68
MACF1Q9UPN3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
MACF1Q9UPN3 AC009831.1-201ENST00000580420 1582 ntBASIC10.79□□□□□ -0.68
MACF1Q9UPN3 ECEL1P2-201ENST00000461596 1295 ntBASIC10.79□□□□□ -0.68
MACF1Q9UPN3 MIR6765-201ENST00000614092 87 ntBASIC10.79□□□□□ -0.68
MACF1Q9UPN3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
MACF1Q9UPN3 Z92544.1-202ENST00000571933 1220 ntBASIC10.78□□□□□ -0.68
MACF1Q9UPN3 MIR4508-201ENST00000584178 70 ntBASIC10.78□□□□□ -0.68
MACF1Q9UPN3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
MACF1Q9UPN3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC10.78□□□□□ -0.68
MACF1Q9UPN3 AC126177.7-201ENST00000547904 679 ntBASIC10.78□□□□□ -0.68
MACF1Q9UPN3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC10.78□□□□□ -0.68
MACF1Q9UPN3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
MACF1Q9UPN3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC10.77□□□□□ -0.68
MACF1Q9UPN3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
MACF1Q9UPN3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
MACF1Q9UPN3 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC10.77□□□□□ -0.68
MACF1Q9UPN3 AL031848.2-201ENST00000607670 837 ntBASIC10.77□□□□□ -0.68
MACF1Q9UPN3 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
MACF1Q9UPN3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC10.77□□□□□ -0.69
MACF1Q9UPN3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
MACF1Q9UPN3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC10.77□□□□□ -0.69
MACF1Q9UPN3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
MACF1Q9UPN3 LINC00273-201ENST00000539813 1452 ntBASIC10.77□□□□□ -0.69
MACF1Q9UPN3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
MACF1Q9UPN3 AL157400.5-201ENST00000507624 621 ntBASIC10.76□□□□□ -0.69
MACF1Q9UPN3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC10.76□□□□□ -0.69
MACF1Q9UPN3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC10.76□□□□□ -0.69
MACF1Q9UPN3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC10.76□□□□□ -0.69
MACF1Q9UPN3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC10.76□□□□□ -0.69
MACF1Q9UPN3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC10.76□□□□□ -0.69
MACF1Q9UPN3 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
MACF1Q9UPN3 AL162430.1-201ENST00000480705 870 ntBASIC10.76□□□□□ -0.69
MACF1Q9UPN3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
MACF1Q9UPN3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
MACF1Q9UPN3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC10.75□□□□□ -0.69
MACF1Q9UPN3 HYI-210ENST00000486909 905 ntTSL 5 BASIC10.75□□□□□ -0.69
MACF1Q9UPN3 AC131281.2-201ENST00000520478 145 ntBASIC10.75□□□□□ -0.69
MACF1Q9UPN3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
MACF1Q9UPN3 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
MACF1Q9UPN3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
MACF1Q9UPN3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC10.75□□□□□ -0.69
MACF1Q9UPN3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC10.75□□□□□ -0.69
MACF1Q9UPN3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
MACF1Q9UPN3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
MACF1Q9UPN3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC10.74□□□□□ -0.69
MACF1Q9UPN3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
MACF1Q9UPN3 PVT1_1.1-201ENST00000615125 194 ntBASIC10.74□□□□□ -0.69
MACF1Q9UPN3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
MACF1Q9UPN3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC10.74□□□□□ -0.69
MACF1Q9UPN3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC10.73□□□□□ -0.69
MACF1Q9UPN3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC10.73□□□□□ -0.69
MACF1Q9UPN3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
MACF1Q9UPN3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
MACF1Q9UPN3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
MACF1Q9UPN3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
MACF1Q9UPN3 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms