Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.5■■□□□ 1.03
C12orf4Q9NQ89 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.5■■□□□ 1.03
C12orf4Q9NQ89 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
C12orf4Q9NQ89 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
C12orf4Q9NQ89 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.49■■□□□ 1.03
C12orf4Q9NQ89 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.49■■□□□ 1.03
C12orf4Q9NQ89 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.49■■□□□ 1.03
C12orf4Q9NQ89 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
C12orf4Q9NQ89 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
C12orf4Q9NQ89 AC097358.2-201ENST00000607541 1159 ntBASIC21.49■■□□□ 1.03
C12orf4Q9NQ89 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
C12orf4Q9NQ89 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.49■■□□□ 1.03
C12orf4Q9NQ89 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.49■■□□□ 1.03
C12orf4Q9NQ89 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
C12orf4Q9NQ89 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
C12orf4Q9NQ89 LINC01003-201ENST00000564834 1764 ntBASIC21.48■■□□□ 1.03
C12orf4Q9NQ89 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.47■■□□□ 1.03
C12orf4Q9NQ89 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
C12orf4Q9NQ89 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
C12orf4Q9NQ89 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
C12orf4Q9NQ89 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
C12orf4Q9NQ89 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
C12orf4Q9NQ89 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
C12orf4Q9NQ89 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
C12orf4Q9NQ89 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.46■■□□□ 1.03
C12orf4Q9NQ89 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
C12orf4Q9NQ89 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
C12orf4Q9NQ89 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
C12orf4Q9NQ89 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
C12orf4Q9NQ89 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.45■■□□□ 1.02
C12orf4Q9NQ89 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
C12orf4Q9NQ89 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
C12orf4Q9NQ89 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
C12orf4Q9NQ89 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
C12orf4Q9NQ89 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.45■■□□□ 1.02
C12orf4Q9NQ89 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
C12orf4Q9NQ89 AC100797.4-201ENST00000631653 1827 ntBASIC21.44■■□□□ 1.02
C12orf4Q9NQ89 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.44■■□□□ 1.02
C12orf4Q9NQ89 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
C12orf4Q9NQ89 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.44■■□□□ 1.02
C12orf4Q9NQ89 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
C12orf4Q9NQ89 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
C12orf4Q9NQ89 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.43■■□□□ 1.02
C12orf4Q9NQ89 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
C12orf4Q9NQ89 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
C12orf4Q9NQ89 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.43■■□□□ 1.02
C12orf4Q9NQ89 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
C12orf4Q9NQ89 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
C12orf4Q9NQ89 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
C12orf4Q9NQ89 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
C12orf4Q9NQ89 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
C12orf4Q9NQ89 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
C12orf4Q9NQ89 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.41■■□□□ 1.02
C12orf4Q9NQ89 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
C12orf4Q9NQ89 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.41■■□□□ 1.02
C12orf4Q9NQ89 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.41■■□□□ 1.02
C12orf4Q9NQ89 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
C12orf4Q9NQ89 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.41■■□□□ 1.02
C12orf4Q9NQ89 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
C12orf4Q9NQ89 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
C12orf4Q9NQ89 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
C12orf4Q9NQ89 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
C12orf4Q9NQ89 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
C12orf4Q9NQ89 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.4■■□□□ 1.02
C12orf4Q9NQ89 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
C12orf4Q9NQ89 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
C12orf4Q9NQ89 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
C12orf4Q9NQ89 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
C12orf4Q9NQ89 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.39■■□□□ 1.02
C12orf4Q9NQ89 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
C12orf4Q9NQ89 MIR762-201ENST00000390236 83 ntBASIC21.39■■□□□ 1.01
C12orf4Q9NQ89 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.39■■□□□ 1.01
C12orf4Q9NQ89 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
C12orf4Q9NQ89 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
C12orf4Q9NQ89 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
C12orf4Q9NQ89 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
C12orf4Q9NQ89 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
C12orf4Q9NQ89 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
C12orf4Q9NQ89 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
C12orf4Q9NQ89 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
C12orf4Q9NQ89 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.37■■□□□ 1.01
C12orf4Q9NQ89 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.37■■□□□ 1.01
C12orf4Q9NQ89 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
C12orf4Q9NQ89 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
C12orf4Q9NQ89 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
C12orf4Q9NQ89 AP002414.2-202ENST00000590929 1450 ntBASIC21.36■■□□□ 1.01
C12orf4Q9NQ89 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
C12orf4Q9NQ89 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
C12orf4Q9NQ89 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.35■■□□□ 1.01
C12orf4Q9NQ89 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
C12orf4Q9NQ89 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
C12orf4Q9NQ89 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
C12orf4Q9NQ89 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
C12orf4Q9NQ89 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.34■■□□□ 1.01
C12orf4Q9NQ89 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
C12orf4Q9NQ89 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
C12orf4Q9NQ89 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
C12orf4Q9NQ89 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
C12orf4Q9NQ89 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.33■■□□□ 1.01
C12orf4Q9NQ89 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms