Protein–RNA interactions for Protein: Q9HCG8

CWC22, Pre-mRNA-splicing factor CWC22 homolog, humanhuman

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CWC22Q9HCG8 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CWC22Q9HCG8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CWC22Q9HCG8 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC30.34■■■□□ 2.45
CWC22Q9HCG8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CWC22Q9HCG8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
CWC22Q9HCG8 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.33■■■□□ 2.45
CWC22Q9HCG8 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.33■■■□□ 2.45
CWC22Q9HCG8 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.33■■■□□ 2.45
CWC22Q9HCG8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
CWC22Q9HCG8 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC30.33■■■□□ 2.45
CWC22Q9HCG8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CWC22Q9HCG8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.31■■■□□ 2.44
CWC22Q9HCG8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
CWC22Q9HCG8 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC30.31■■■□□ 2.44
CWC22Q9HCG8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CWC22Q9HCG8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.29■■■□□ 2.44
CWC22Q9HCG8 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CWC22Q9HCG8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC30.29■■■□□ 2.44
CWC22Q9HCG8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC30.28■■■□□ 2.44
CWC22Q9HCG8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
CWC22Q9HCG8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CWC22Q9HCG8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
CWC22Q9HCG8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
CWC22Q9HCG8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC30.28■■■□□ 2.44
CWC22Q9HCG8 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CWC22Q9HCG8 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CWC22Q9HCG8 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
CWC22Q9HCG8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CWC22Q9HCG8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CWC22Q9HCG8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CWC22Q9HCG8 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CWC22Q9HCG8 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC30.25■■■□□ 2.43
CWC22Q9HCG8 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.25■■■□□ 2.43
CWC22Q9HCG8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC30.25■■■□□ 2.43
CWC22Q9HCG8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
CWC22Q9HCG8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
CWC22Q9HCG8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CWC22Q9HCG8 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CWC22Q9HCG8 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.24■■■□□ 2.43
CWC22Q9HCG8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.24■■■□□ 2.43
CWC22Q9HCG8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CWC22Q9HCG8 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
CWC22Q9HCG8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.23■■■□□ 2.43
CWC22Q9HCG8 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
CWC22Q9HCG8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.22■■■□□ 2.43
CWC22Q9HCG8 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CWC22Q9HCG8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CWC22Q9HCG8 LINC01003-201ENST00000564834 1764 ntBASIC30.21■■■□□ 2.43
CWC22Q9HCG8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.21■■■□□ 2.43
CWC22Q9HCG8 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
CWC22Q9HCG8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CWC22Q9HCG8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.21■■■□□ 2.43
CWC22Q9HCG8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC30.21■■■□□ 2.43
CWC22Q9HCG8 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
CWC22Q9HCG8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.43
CWC22Q9HCG8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CWC22Q9HCG8 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC30.19■■■□□ 2.42
CWC22Q9HCG8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CWC22Q9HCG8 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CWC22Q9HCG8 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CWC22Q9HCG8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CWC22Q9HCG8 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CWC22Q9HCG8 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CWC22Q9HCG8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
CWC22Q9HCG8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
CWC22Q9HCG8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
CWC22Q9HCG8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
CWC22Q9HCG8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CWC22Q9HCG8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
CWC22Q9HCG8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CWC22Q9HCG8 AC127502.1-201ENST00000399971 1502 ntBASIC30.17■■■□□ 2.42
CWC22Q9HCG8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.16■■■□□ 2.42
CWC22Q9HCG8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC30.16■■■□□ 2.42
CWC22Q9HCG8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
CWC22Q9HCG8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
CWC22Q9HCG8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CWC22Q9HCG8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CWC22Q9HCG8 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
CWC22Q9HCG8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CWC22Q9HCG8 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
CWC22Q9HCG8 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC30.14■■■□□ 2.41
CWC22Q9HCG8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CWC22Q9HCG8 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.13■■■□□ 2.41
CWC22Q9HCG8 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CWC22Q9HCG8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.12■■■□□ 2.41
CWC22Q9HCG8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.12■■■□□ 2.41
CWC22Q9HCG8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.12■■■□□ 2.41
CWC22Q9HCG8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC30.12■■■□□ 2.41
CWC22Q9HCG8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC30.12■■■□□ 2.41
CWC22Q9HCG8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.12■■■□□ 2.41
CWC22Q9HCG8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.12■■■□□ 2.41
CWC22Q9HCG8 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CWC22Q9HCG8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
CWC22Q9HCG8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.1■■■□□ 2.41
CWC22Q9HCG8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.1■■■□□ 2.41
CWC22Q9HCG8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CWC22Q9HCG8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
CWC22Q9HCG8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.09■■■□□ 2.41
CWC22Q9HCG8 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
CWC22Q9HCG8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms