Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.77■□□□□ 0.76
CHRDL1Q9BU40 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRDL1Q9BU40 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.76■□□□□ 0.75
CHRDL1Q9BU40 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRDL1Q9BU40 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHRDL1Q9BU40 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.75■□□□□ 0.75
CHRDL1Q9BU40 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHRDL1Q9BU40 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHRDL1Q9BU40 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRDL1Q9BU40 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRDL1Q9BU40 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHRDL1Q9BU40 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CHRDL1Q9BU40 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.74■□□□□ 0.75
CHRDL1Q9BU40 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRDL1Q9BU40 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHRDL1Q9BU40 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.73■□□□□ 0.75
CHRDL1Q9BU40 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.73■□□□□ 0.75
CHRDL1Q9BU40 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.73■□□□□ 0.75
CHRDL1Q9BU40 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRDL1Q9BU40 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CHRDL1Q9BU40 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.73■□□□□ 0.75
CHRDL1Q9BU40 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.73■□□□□ 0.75
CHRDL1Q9BU40 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRDL1Q9BU40 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CHRDL1Q9BU40 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRDL1Q9BU40 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHRDL1Q9BU40 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CHRDL1Q9BU40 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRDL1Q9BU40 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CHRDL1Q9BU40 AC021231.2-201ENST00000594613 730 ntBASIC19.71■□□□□ 0.75
CHRDL1Q9BU40 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CHRDL1Q9BU40 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.7■□□□□ 0.74
CHRDL1Q9BU40 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRDL1Q9BU40 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRDL1Q9BU40 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.69■□□□□ 0.74
CHRDL1Q9BU40 AP002414.2-202ENST00000590929 1450 ntBASIC19.69■□□□□ 0.74
CHRDL1Q9BU40 DUX4L29-201ENST00000425409 679 ntBASIC19.69■□□□□ 0.74
CHRDL1Q9BU40 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHRDL1Q9BU40 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRDL1Q9BU40 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHRDL1Q9BU40 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.68■□□□□ 0.74
CHRDL1Q9BU40 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRDL1Q9BU40 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.68■□□□□ 0.74
CHRDL1Q9BU40 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.68■□□□□ 0.74
CHRDL1Q9BU40 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHRDL1Q9BU40 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRDL1Q9BU40 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.67■□□□□ 0.74
CHRDL1Q9BU40 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
CHRDL1Q9BU40 BX255925.1-201ENST00000566954 1854 ntBASIC19.67■□□□□ 0.74
CHRDL1Q9BU40 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRDL1Q9BU40 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.67■□□□□ 0.74
CHRDL1Q9BU40 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRDL1Q9BU40 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRDL1Q9BU40 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRDL1Q9BU40 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.66■□□□□ 0.74
CHRDL1Q9BU40 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.66■□□□□ 0.74
CHRDL1Q9BU40 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHRDL1Q9BU40 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CHRDL1Q9BU40 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHRDL1Q9BU40 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CHRDL1Q9BU40 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRDL1Q9BU40 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRDL1Q9BU40 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRDL1Q9BU40 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHRDL1Q9BU40 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRDL1Q9BU40 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRDL1Q9BU40 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.65■□□□□ 0.74
CHRDL1Q9BU40 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRDL1Q9BU40 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CHRDL1Q9BU40 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.65■□□□□ 0.74
CHRDL1Q9BU40 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHRDL1Q9BU40 LINC01003-201ENST00000564834 1764 ntBASIC19.65■□□□□ 0.74
CHRDL1Q9BU40 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CHRDL1Q9BU40 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
CHRDL1Q9BU40 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRDL1Q9BU40 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CHRDL1Q9BU40 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRDL1Q9BU40 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.63■□□□□ 0.73
CHRDL1Q9BU40 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRDL1Q9BU40 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRDL1Q9BU40 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRDL1Q9BU40 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRDL1Q9BU40 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHRDL1Q9BU40 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.62■□□□□ 0.73
CHRDL1Q9BU40 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHRDL1Q9BU40 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.62■□□□□ 0.73
CHRDL1Q9BU40 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRDL1Q9BU40 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRDL1Q9BU40 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CHRDL1Q9BU40 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHRDL1Q9BU40 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRDL1Q9BU40 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.61■□□□□ 0.73
CHRDL1Q9BU40 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRDL1Q9BU40 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CHRDL1Q9BU40 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHRDL1Q9BU40 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.59■□□□□ 0.73
CHRDL1Q9BU40 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.59■□□□□ 0.73
CHRDL1Q9BU40 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.59■□□□□ 0.73
CHRDL1Q9BU40 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CHRDL1Q9BU40 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms