Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SHISA3A0PJX4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SHISA3A0PJX4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22■■□□□ 1.11
SHISA3A0PJX4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22■■□□□ 1.11
SHISA3A0PJX4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
SHISA3A0PJX4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SHISA3A0PJX4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SHISA3A0PJX4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SHISA3A0PJX4 AC018358.1-201ENST00000631079 1402 ntBASIC21.99■■□□□ 1.11
SHISA3A0PJX4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SHISA3A0PJX4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SHISA3A0PJX4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SHISA3A0PJX4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SHISA3A0PJX4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.99■■□□□ 1.11
SHISA3A0PJX4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.99■■□□□ 1.11
SHISA3A0PJX4 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SHISA3A0PJX4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SHISA3A0PJX4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SHISA3A0PJX4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SHISA3A0PJX4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
SHISA3A0PJX4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
SHISA3A0PJX4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SHISA3A0PJX4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.97■■□□□ 1.11
SHISA3A0PJX4 DUSP8P4-201ENST00000399538 1761 ntBASIC21.97■■□□□ 1.11
SHISA3A0PJX4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHISA3A0PJX4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHISA3A0PJX4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHISA3A0PJX4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.96■■□□□ 1.11
SHISA3A0PJX4 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.96■■□□□ 1.11
SHISA3A0PJX4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.96■■□□□ 1.11
SHISA3A0PJX4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHISA3A0PJX4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.95■■□□□ 1.1
SHISA3A0PJX4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.95■■□□□ 1.1
SHISA3A0PJX4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
SHISA3A0PJX4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.95■■□□□ 1.1
SHISA3A0PJX4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SHISA3A0PJX4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
SHISA3A0PJX4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.95■■□□□ 1.1
SHISA3A0PJX4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.95■■□□□ 1.1
SHISA3A0PJX4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.94■■□□□ 1.1
SHISA3A0PJX4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHISA3A0PJX4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SHISA3A0PJX4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SHISA3A0PJX4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SHISA3A0PJX4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SHISA3A0PJX4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SHISA3A0PJX4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHISA3A0PJX4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHISA3A0PJX4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.92■■□□□ 1.1
SHISA3A0PJX4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.92■■□□□ 1.1
SHISA3A0PJX4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.92■■□□□ 1.1
SHISA3A0PJX4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHISA3A0PJX4 AC092803.2-201ENST00000564287 1899 ntBASIC21.92■■□□□ 1.1
SHISA3A0PJX4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHISA3A0PJX4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SHISA3A0PJX4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHISA3A0PJX4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.91■■□□□ 1.1
SHISA3A0PJX4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHISA3A0PJX4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SHISA3A0PJX4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SHISA3A0PJX4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.09
SHISA3A0PJX4 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHISA3A0PJX4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHISA3A0PJX4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHISA3A0PJX4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
SHISA3A0PJX4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.88■■□□□ 1.09
SHISA3A0PJX4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHISA3A0PJX4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SHISA3A0PJX4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SHISA3A0PJX4 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.86■■□□□ 1.09
SHISA3A0PJX4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SHISA3A0PJX4 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
SHISA3A0PJX4 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
SHISA3A0PJX4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.85■■□□□ 1.09
SHISA3A0PJX4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.85■■□□□ 1.09
SHISA3A0PJX4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHISA3A0PJX4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.85■■□□□ 1.09
SHISA3A0PJX4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SHISA3A0PJX4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHISA3A0PJX4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHISA3A0PJX4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.84■■□□□ 1.09
SHISA3A0PJX4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
SHISA3A0PJX4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHISA3A0PJX4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHISA3A0PJX4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHISA3A0PJX4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHISA3A0PJX4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHISA3A0PJX4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.84■■□□□ 1.09
SHISA3A0PJX4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.83■■□□□ 1.09
SHISA3A0PJX4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHISA3A0PJX4 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.83■■□□□ 1.09
SHISA3A0PJX4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
SHISA3A0PJX4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
SHISA3A0PJX4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SHISA3A0PJX4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHISA3A0PJX4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHISA3A0PJX4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHISA3A0PJX4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHISA3A0PJX4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHISA3A0PJX4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms