RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 MTC1P47018 478 aaKnown RBP6.91□□□□□ -1.3
snR43snR43 DRS1P32892 752 aaKnown RBP6.85□□□□□ -1.31
snR43snR43 FAP1P53971 965 aa6.38□□□□□ -1.39
snR43snR43 PRY3P47033 881 aa6.01□□□□□ -1.45
snR43snR43 PRI1P10363 409 aa5.93□□□□□ -1.46
snR43snR43 AAD16Q02895 342 aa5.92□□□□□ -1.46
snR43snR43 BFR2Q06631 534 aaKnown RBP5.86□□□□□ -1.47
snR43snR43 DIP2Q12220 943 aaPredicted RBP5.86□□□□□ -1.47
snR43snR43 MON2P48563 1636 aaPredicted RBP5.83□□□□□ -1.48
snR43snR43 INO80P53115 1489 aa5.81□□□□□ -1.48
snR43snR43 ISW2Q08773 1120 aa5.76□□□□□ -1.49
snR43snR43 AVT3P36062 692 aa5.71□□□□□ -1.5
snR43snR43 YCK3P39962 524 aa5.71□□□□□ -1.5
snR43snR43 RPG1P38249 964 aaKnown RBP5.7□□□□□ -1.5
snR43snR43 HAA1Q12753 694 aaKnown RBP5.66□□□□□ -1.5
snR43snR43 TSR3Q12094 313 aaKnown RBP5.58□□□□□ -1.52
snR43snR43 DNA2P38859 1522 aa5.54□□□□□ -1.52
snR43snR43 RSE1Q04693 1361 aaKnown RBP5.52□□□□□ -1.53
snR43snR43 SWR1Q05471 1514 aa5.5□□□□□ -1.53
snR43snR43 KOG1P38873 1557 aa5.44□□□□□ -1.54
snR43snR43 TCB3Q03640 1545 aaKnown RBP5.42□□□□□ -1.54
snR43snR43 TY1B-DR4Q07793 1604 aa5.38□□□□□ -1.55
snR43snR43 RPL17AP05740 184 aaKnown RBP5.37□□□□□ -1.55
snR43snR43 RPL17BP46990 184 aaKnown RBP5.37□□□□□ -1.55
snR43snR43 MRPL32P25348 183 aa5.36□□□□□ -1.55
snR43snR43 TFA1P36100 482 aa5.35□□□□□ -1.55
snR43snR43 REB1P21538 810 aa5.3□□□□□ -1.56
snR43snR43 SGS1P35187 1447 aa5.25□□□□□ -1.57
snR43snR43 YGL015CP33199 130 aa5.21□□□□□ -1.58
snR43snR43 HSL1P34244 1518 aa5.18□□□□□ -1.58
snR43snR43 SPT6P23615 1451 aaKnown RBP5.17□□□□□ -1.58
snR43snR43 SPA2P23201 1466 aaKnown RBP5.13□□□□□ -1.59
snR43snR43 ECM5Q03214 1411 aa5.13□□□□□ -1.59
snR43snR43 SPT21P35209 758 aa5.12□□□□□ -1.59
snR43snR43 BUD4P47136 1447 aa5.07□□□□□ -1.6
snR43snR43 CDC27P38042 758 aa5.07□□□□□ -1.6
snR43snR43 THO2P53552 1597 aaKnown RBP5.06□□□□□ -1.6
snR43snR43 HIR3P47171 1648 aa5.05□□□□□ -1.6
snR43snR43 YKR023WP36119 530 aaKnown RBP5.03□□□□□ -1.6
snR43snR43 MDS3P53094 1487 aa5.02□□□□□ -1.61
snR43snR43 RIM101P33400 625 aa5□□□□□ -1.61
snR43snR43 DCD1P06773 312 aa4.99□□□□□ -1.61
snR43snR43 REV3P14284 1504 aa4.97□□□□□ -1.61
snR43snR43 PEP1P32319 1579 aa4.97□□□□□ -1.61
snR43snR43 HOP09932 586 aa4.97□□□□□ -1.61
snR43snR43 UBP10P53874 792 aaPredicted RBP4.96□□□□□ -1.62
snR43snR43 XRN1P22147 1528 aaKnown RBP4.93□□□□□ -1.62
snR43snR43 MAP2P38174 421 aaKnown RBP4.93□□□□□ -1.62
snR43snR43 TFC8Q12308 588 aa4.92□□□□□ -1.62
snR43snR43 OXP1P28273 1286 aa4.9□□□□□ -1.63
snR43snR43 YAH1Q12184 172 aaKnown RBP4.89□□□□□ -1.63
snR43snR43 ATG2P53855 1592 aa4.89□□□□□ -1.63
snR43snR43 BPT1P14772 1559 aa4.88□□□□□ -1.63
snR43snR43 PTP3P40048 928 aa4.88□□□□□ -1.63
snR43snR43 BUD31P25337 157 aaPredicted RBP4.85□□□□□ -1.63
snR43snR43 YIL055CP40523 627 aaKnown RBP4.81□□□□□ -1.64
snR43snR43 YCF1P39109 1515 aaKnown RBP4.81□□□□□ -1.64
snR43snR43 SSK2P53599 1579 aa4.79□□□□□ -1.64
snR43snR43 SIN3P22579 1536 aa4.79□□□□□ -1.64
snR43snR43 SCY1P53009 804 aa4.79□□□□□ -1.64
snR43snR43 SKI3P17883 1432 aaKnown RBP4.78□□□□□ -1.64
snR43snR43 MIF2P35201 549 aa4.77□□□□□ -1.65
snR43snR43 BCH2P36122 765 aa4.77□□□□□ -1.65
snR43snR43 SSN2P38931 1420 aa4.77□□□□□ -1.65
snR43snR43 SLX5P32828 619 aaKnown RBP4.75□□□□□ -1.65
snR43snR43 TIF4632P39936 914 aaKnown RBP4.75□□□□□ -1.65
snR43snR43 TGL3P40308 642 aa4.75□□□□□ -1.65
snR43snR43 TAF2P23255 1407 aa4.74□□□□□ -1.65
snR43snR43 SSP1P38871 571 aa4.74□□□□□ -1.65
snR43snR43 YLR271WQ06152 274 aa4.74□□□□□ -1.65
snR43snR43 UFD4P33202 1483 aa4.74□□□□□ -1.65
snR43snR43 MET5P47169 1442 aa4.72□□□□□ -1.65
snR43snR43 RSM7P47150 247 aa4.72□□□□□ -1.65
snR43snR43 YPK9Q12697 1472 aa4.69□□□□□ -1.66
snR43snR43 CHD1P32657 1468 aa4.69□□□□□ -1.66
snR43snR43 SCC2Q04002 1493 aa4.69□□□□□ -1.66
snR43snR43 ESP1Q03018 1630 aa4.68□□□□□ -1.66
snR43snR43 LTE1P07866 1435 aa4.68□□□□□ -1.66
snR43snR43 MYO2P19524 1574 aaKnown RBP4.68□□□□□ -1.66
snR43snR43 RPO31P04051 1460 aa4.68□□□□□ -1.66
snR43snR43 DNF1P32660 1571 aa4.67□□□□□ -1.66
snR43snR43 AI2P03876 854 aa4.67□□□□□ -1.66
snR43snR43 EPS1P40557 701 aa4.67□□□□□ -1.66
snR43snR43 CDC25P04821 1589 aa4.65□□□□□ -1.66
snR43snR43 ARP8Q12386 881 aaKnown RBP RIP-Chip data4.65□□□□□ -1.67not detected
snR43snR43 BDF1P35817 686 aa4.64□□□□□ -1.67
snR43snR43 UBP9P39967 754 aa4.64□□□□□ -1.67
snR43snR43 CST9Q06032 482 aa4.63□□□□□ -1.67
snR43snR43 PAN1P32521 1480 aa4.62□□□□□ -1.67
snR43snR43 RKR1Q04781 1562 aa4.62□□□□□ -1.67
snR43snR43 BNI1P41832 1953 aa4.62□□□□□ -1.67
snR43snR43 BBC1P47068 1157 aa4.61□□□□□ -1.67
snR43snR43 YFR006WP43590 535 aa4.6□□□□□ -1.67
snR43snR43 ITT1Q04638 464 aa4.6□□□□□ -1.67
snR43snR43 RPA190P10964 1664 aaKnown RBP4.59□□□□□ -1.67
snR43snR43 GEA2P39993 1459 aaKnown RBP4.59□□□□□ -1.67
snR43snR43 PSD2P53037 1138 aaKnown RBP4.59□□□□□ -1.67
snR43snR43 TOP2P06786 1428 aaKnown RBP4.58□□□□□ -1.68
snR43snR43 SIS1P25294 352 aaKnown RBP4.58□□□□□ -1.68
snR43snR43 TY2B-LR1P0C2J3 1770 aa4.57□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms