RNA–Protein interactions for RNA: YPR133C

SPN1, Transcript of Protein involved in RNA polymerase II transcription, yeastyeast

Gene SPN1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPN1YPR133C MTC1P47018 478 aaKnown RBP12.08□□□□□ -0.48
SPN1YPR133C FAP1P53971 965 aa11.77□□□□□ -0.53
SPN1YPR133C PRY3P47033 881 aa11.11□□□□□ -0.63
SPN1YPR133C DRS1P32892 752 aaKnown RBP11.07□□□□□ -0.64
SPN1YPR133C AAD16Q02895 342 aa10.48□□□□□ -0.73
SPN1YPR133C PRI1P10363 409 aa10.45□□□□□ -0.74
SPN1YPR133C YCK3P39962 524 aa10.41□□□□□ -0.74
SPN1YPR133C HAA1Q12753 694 aaKnown RBP10.29□□□□□ -0.76
SPN1YPR133C ISW2Q08773 1120 aa10.12□□□□□ -0.79
SPN1YPR133C RPG1P38249 964 aaKnown RBP9.98□□□□□ -0.81
SPN1YPR133C TSR3Q12094 313 aaKnown RBP9.8□□□□□ -0.84
SPN1YPR133C MON2P48563 1636 aaPredicted RBP9.7□□□□□ -0.86
SPN1YPR133C DIP2Q12220 943 aaPredicted RBP9.63□□□□□ -0.87
SPN1YPR133C INO80P53115 1489 aa9.58□□□□□ -0.88
SPN1YPR133C MRPL32P25348 183 aa9.47□□□□□ -0.89
SPN1YPR133C RSE1Q04693 1361 aaKnown RBP9.46□□□□□ -0.9
SPN1YPR133C BFR2Q06631 534 aaKnown RBP9.4□□□□□ -0.9
SPN1YPR133C AVT3P36062 692 aa9.32□□□□□ -0.92
SPN1YPR133C YGL015CP33199 130 aa9.31□□□□□ -0.92
SPN1YPR133C REB1P21538 810 aa9.19□□□□□ -0.94
SPN1YPR133C DNA2P38859 1522 aa9.17□□□□□ -0.94
SPN1YPR133C RPL17AP05740 184 aaKnown RBP9.17□□□□□ -0.94
SPN1YPR133C RPL17BP46990 184 aaKnown RBP9.17□□□□□ -0.94
SPN1YPR133C SWR1Q05471 1514 aa9.12□□□□□ -0.95
SPN1YPR133C BUD31P25337 157 aaPredicted RBP9.11□□□□□ -0.95
SPN1YPR133C KOG1P38873 1557 aa9.04□□□□□ -0.96
SPN1YPR133C TY1B-DR4Q07793 1604 aa9.02□□□□□ -0.96
SPN1YPR133C TCB3Q03640 1545 aaKnown RBP8.94□□□□□ -0.98
SPN1YPR133C CDC27P38042 758 aa8.86□□□□□ -0.99
SPN1YPR133C SPT21P35209 758 aa8.76□□□□□ -1.01
SPN1YPR133C UBP10P53874 792 aaPredicted RBP8.75□□□□□ -1.01
SPN1YPR133C YKR023WP36119 530 aaKnown RBP8.74□□□□□ -1.01
SPN1YPR133C MAP2P38174 421 aaKnown RBP8.65□□□□□ -1.02
SPN1YPR133C SGS1P35187 1447 aa8.63□□□□□ -1.03
SPN1YPR133C HSL1P34244 1518 aa8.61□□□□□ -1.03
SPN1YPR133C TFA1P36100 482 aa8.59□□□□□ -1.03
SPN1YPR133C SPT6P23615 1451 aaKnown RBP8.58□□□□□ -1.04
SPN1YPR133C TFC8Q12308 588 aa8.58□□□□□ -1.04
SPN1YPR133C SIS1P25294 352 aaKnown RBP8.57□□□□□ -1.04
SPN1YPR133C HOP09932 586 aa8.54□□□□□ -1.04
SPN1YPR133C DCD1P06773 312 aa8.5□□□□□ -1.05
SPN1YPR133C SPA2P23201 1466 aaKnown RBP8.5□□□□□ -1.05
SPN1YPR133C ECM5Q03214 1411 aa8.44□□□□□ -1.06
SPN1YPR133C THO2P53552 1597 aaKnown RBP8.43□□□□□ -1.06
SPN1YPR133C HIR3P47171 1648 aa8.42□□□□□ -1.06
SPN1YPR133C TIF4632P39936 914 aaKnown RBP8.39□□□□□ -1.07
SPN1YPR133C SCY1P53009 804 aa8.39□□□□□ -1.07
SPN1YPR133C BUD4P47136 1447 aa8.37□□□□□ -1.07
SPN1YPR133C RIM101P33400 625 aa8.36□□□□□ -1.07
SPN1YPR133C SLX5P32828 619 aaKnown RBP8.35□□□□□ -1.07
SPN1YPR133C TGL3P40308 642 aa8.35□□□□□ -1.07
SPN1YPR133C MDS3P53094 1487 aa8.34□□□□□ -1.07
SPN1YPR133C UBP9P39967 754 aa8.34□□□□□ -1.07
SPN1YPR133C BCH2P36122 765 aa8.26□□□□□ -1.09
SPN1YPR133C PEP1P32319 1579 aa8.26□□□□□ -1.09
SPN1YPR133C REV3P14284 1504 aa8.23□□□□□ -1.09
SPN1YPR133C XRN1P22147 1528 aaKnown RBP8.19□□□□□ -1.1
SPN1YPR133C ATG2P53855 1592 aa8.19□□□□□ -1.1
SPN1YPR133C BPT1P14772 1559 aa8.14□□□□□ -1.11
SPN1YPR133C EPS1P40557 701 aa8.04□□□□□ -1.12
SPN1YPR133C SSK2P53599 1579 aa8.03□□□□□ -1.12
SPN1YPR133C OXP1P28273 1286 aa8.02□□□□□ -1.13
SPN1YPR133C BDF1P35817 686 aa8.01□□□□□ -1.13
SPN1YPR133C YCF1P39109 1515 aaKnown RBP8□□□□□ -1.13
SPN1YPR133C SIN3P22579 1536 aa7.97□□□□□ -1.13
SPN1YPR133C MST1P07236 462 aa7.95□□□□□ -1.14
SPN1YPR133C PTP3P40048 928 aa7.95□□□□□ -1.14
SPN1YPR133C YIL055CP40523 627 aaKnown RBP7.94□□□□□ -1.14
SPN1YPR133C SKI3P17883 1432 aaKnown RBP7.93□□□□□ -1.14
SPN1YPR133C ESP1Q03018 1630 aa7.91□□□□□ -1.14
SPN1YPR133C TAF2P23255 1407 aa7.9□□□□□ -1.14
SPN1YPR133C NSR1P27476 414 aaKnown RBP RIP-Chip data7.9□□□□□ -1.14not detected
SPN1YPR133C YOR238WQ08634 303 aa7.89□□□□□ -1.15
SPN1YPR133C YBL029C-AQ3E756 94 aa7.87□□□□□ -1.15
SPN1YPR133C BBC1P47068 1157 aa7.86□□□□□ -1.15
SPN1YPR133C SSN2P38931 1420 aa7.86□□□□□ -1.15
SPN1YPR133C ESC1Q03661 1658 aaKnown RBP7.83□□□□□ -1.16
SPN1YPR133C RSM7P47150 247 aa7.83□□□□□ -1.16
SPN1YPR133C UFD4P33202 1483 aa7.82□□□□□ -1.16
SPN1YPR133C TY2B-LR1P0C2J3 1770 aa7.8□□□□□ -1.16
SPN1YPR133C TY2B-FP0CX63 1770 aa7.8□□□□□ -1.16
SPN1YPR133C TY2B-GR2P0CX64 1770 aa7.8□□□□□ -1.16
SPN1YPR133C TY2B-CP25384 1770 aa7.8□□□□□ -1.16
SPN1YPR133C TY2B-DR2Q03494 1770 aa7.8□□□□□ -1.16
SPN1YPR133C TY1B-DR1Q03855 1755 aa7.8□□□□□ -1.16
SPN1YPR133C TY2B-DR3Q07791 1770 aaKnown RBP7.8□□□□□ -1.16
SPN1YPR133C TY2B-OR1Q12113 1770 aa7.8□□□□□ -1.16
SPN1YPR133C TY2B-DR1Q12472 1770 aa7.8□□□□□ -1.16
SPN1YPR133C TY2B-OR2Q12501 1770 aa7.8□□□□□ -1.16
SPN1YPR133C YAH1Q12184 172 aaKnown RBP7.8□□□□□ -1.16
SPN1YPR133C MYO2P19524 1574 aaKnown RBP7.8□□□□□ -1.16
SPN1YPR133C TY1B-BRQ12193 1756 aa7.79□□□□□ -1.16
SPN1YPR133C TY1B-GR3Q12316 1755 aa7.79□□□□□ -1.16
SPN1YPR133C TY1B-ORQ92393 1755 aa7.79□□□□□ -1.16
SPN1YPR133C YAP5P40574 245 aa7.79□□□□□ -1.16
SPN1YPR133C CDC25P04821 1589 aa7.79□□□□□ -1.16
SPN1YPR133C AI2P03876 854 aa7.78□□□□□ -1.16
SPN1YPR133C MIF2P35201 549 aa7.78□□□□□ -1.16
SPN1YPR133C SCC2Q04002 1493 aa7.77□□□□□ -1.17
SPN1YPR133C VNX1P42839 908 aa7.77□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms