RNA–Protein interactions for RNA: YPR101W

SNT309, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene SNT309, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNT309	YPR101W	MTC1	P47018	478 aa	Known RBP	13.9	□□□□□ -0.18
SNT309	YPR101W	FAP1	P53971	965 aa		13.86	□□□□□ -0.19
SNT309	YPR101W	PRY3	P47033	881 aa		13.07	□□□□□ -0.32
SNT309	YPR101W	AAD16	Q02895	342 aa		12.47	□□□□□ -0.41
SNT309	YPR101W	PRI1	P10363	409 aa		12.39	□□□□□ -0.43
SNT309	YPR101W	YCK3	P39962	524 aa		12.28	□□□□□ -0.44
SNT309	YPR101W	HAA1	Q12753	694 aa	Known RBP	12.22	□□□□□ -0.45
SNT309	YPR101W	ISW2	Q08773	1120 aa		11.8	□□□□□ -0.52
SNT309	YPR101W	DRS1	P32892	752 aa	Known RBP	11.79	□□□□□ -0.52
SNT309	YPR101W	SGS1	P35187	1447 aa		11.73	□□□□□ -0.53
SNT309	YPR101W	RPG1	P38249	964 aa	Known RBP	11.69	□□□□□ -0.54
SNT309	YPR101W	TSR3	Q12094	313 aa	Known RBP	11.64	□□□□□ -0.55
SNT309	YPR101W	SPA2	P23201	1466 aa	Known RBP	11.54	□□□□□ -0.56
SNT309	YPR101W	INO80	P53115	1489 aa		11.51	□□□□□ -0.57
SNT309	YPR101W	SSN2	P38931	1420 aa		11.37	□□□□□ -0.59
SNT309	YPR101W	MRPL32	P25348	183 aa		11.21	□□□□□ -0.61
SNT309	YPR101W	TCB3	Q03640	1545 aa	Known RBP	11.2	□□□□□ -0.62
SNT309	YPR101W	YGL015C	P33199	130 aa		11.08	□□□□□ -0.64
SNT309	YPR101W	TY1B-DR4	Q07793	1604 aa		11.02	□□□□□ -0.65
SNT309	YPR101W	HSL1	P34244	1518 aa		10.87	□□□□□ -0.67
SNT309	YPR101W	SPT6	P23615	1451 aa	Known RBP	10.81	□□□□□ -0.68
SNT309	YPR101W	DIP2	Q12220	943 aa	Predicted RBP	10.77	□□□□□ -0.69
SNT309	YPR101W	RSE1	Q04693	1361 aa	Known RBP	10.76	□□□□□ -0.69
SNT309	YPR101W	HIR3	P47171	1648 aa		10.69	□□□□□ -0.7
SNT309	YPR101W	BUD31	P25337	157 aa	Predicted RBP	10.68	□□□□□ -0.7
SNT309	YPR101W	MON2	P48563	1636 aa	Predicted RBP	10.68	□□□□□ -0.7
SNT309	YPR101W	XRN1	P22147	1528 aa	Known RBP	10.63	□□□□□ -0.71
SNT309	YPR101W	SWR1	Q05471	1514 aa		10.6	□□□□□ -0.71
SNT309	YPR101W	SKI3	P17883	1432 aa	Known RBP	10.58	□□□□□ -0.72
SNT309	YPR101W	REV3	P14284	1504 aa		10.55	□□□□□ -0.72
SNT309	YPR101W	REB1	P21538	810 aa		10.55	□□□□□ -0.72
SNT309	YPR101W	SIN3	P22579	1536 aa		10.54	□□□□□ -0.72
SNT309	YPR101W	THO2	P53552	1597 aa	Known RBP	10.54	□□□□□ -0.72
SNT309	YPR101W	RPL17A	P05740	184 aa	Known RBP	10.48	□□□□□ -0.73
SNT309	YPR101W	RPL17B	P46990	184 aa	Known RBP	10.48	□□□□□ -0.73
SNT309	YPR101W	SSK2	P53599	1579 aa		10.48	□□□□□ -0.73
SNT309	YPR101W	CHD1	P32657	1468 aa		10.46	□□□□□ -0.74
SNT309	YPR101W	CDC27	P38042	758 aa		10.41	□□□□□ -0.74
SNT309	YPR101W	MYO2	P19524	1574 aa	Known RBP	10.38	□□□□□ -0.75
SNT309	YPR101W	MMS22	Q06164	1454 aa		10.37	□□□□□ -0.75
SNT309	YPR101W	TAF2	P23255	1407 aa		10.34	□□□□□ -0.75
SNT309	YPR101W	ESP1	Q03018	1630 aa		10.34	□□□□□ -0.75
SNT309	YPR101W	UBP10	P53874	792 aa	Predicted RBP	10.3	□□□□□ -0.76
SNT309	YPR101W	POL1	P13382	1468 aa		10.26	□□□□□ -0.77
SNT309	YPR101W	STU1	P38198	1513 aa		10.23	□□□□□ -0.77
SNT309	YPR101W	MAP2	P38174	421 aa	Known RBP	10.23	□□□□□ -0.77
SNT309	YPR101W	BUD4	P47136	1447 aa		10.21	□□□□□ -0.78
SNT309	YPR101W	YPK9	Q12697	1472 aa		10.2	□□□□□ -0.78
SNT309	YPR101W	ATG2	P53855	1592 aa		10.19	□□□□□ -0.78
SNT309	YPR101W	YTA7	P40340	1379 aa		10.19	□□□□□ -0.78
SNT309	YPR101W	KOG1	P38873	1557 aa		10.18	□□□□□ -0.78
SNT309	YPR101W	DNA2	P38859	1522 aa		10.12	□□□□□ -0.79
SNT309	YPR101W	ECM5	Q03214	1411 aa		10.1	□□□□□ -0.79
SNT309	YPR101W	YKR023W	P36119	530 aa	Known RBP	10.1	□□□□□ -0.79
SNT309	YPR101W	MYO4	P32492	1471 aa		10.08	□□□□□ -0.8
SNT309	YPR101W	BPT1	P14772	1559 aa		10.07	□□□□□ -0.8
SNT309	YPR101W	YOR1	P53049	1477 aa		10.07	□□□□□ -0.8
SNT309	YPR101W	RKR1	Q04781	1562 aa		10.06	□□□□□ -0.8
SNT309	YPR101W	SIS1	P25294	352 aa	Known RBP	10.06	□□□□□ -0.8
SNT309	YPR101W	UFD4	P33202	1483 aa		10.05	□□□□□ -0.8
SNT309	YPR101W	SCC2	Q04002	1493 aa		10.05	□□□□□ -0.8
SNT309	YPR101W	AVT3	P36062	692 aa		10.04	□□□□□ -0.8
SNT309	YPR101W	PEP1	P32319	1579 aa		10.04	□□□□□ -0.8
SNT309	YPR101W	RPO31	P04051	1460 aa		10.02	□□□□□ -0.81
SNT309	YPR101W	SMC4	Q12267	1418 aa		9.99	□□□□□ -0.81
SNT309	YPR101W	MDS3	P53094	1487 aa		9.99	□□□□□ -0.81
SNT309	YPR101W	TRM732	Q03496	1420 aa		9.99	□□□□□ -0.81
SNT309	YPR101W	TOP2	P06786	1428 aa	Known RBP	9.98	□□□□□ -0.81
SNT309	YPR101W	SAS10	Q12136	610 aa	Predicted RBP	9.97	□□□□□ -0.81
SNT309	YPR101W	IKI3	Q06706	1349 aa	Known RBP	9.94	□□□□□ -0.82
SNT309	YPR101W	UBP9	P39967	754 aa		9.94	□□□□□ -0.82
SNT309	YPR101W	SPT21	P35209	758 aa		9.93	□□□□□ -0.82
SNT309	YPR101W	YCF1	P39109	1515 aa	Known RBP	9.92	□□□□□ -0.82
SNT309	YPR101W	TAF7	Q05021	590 aa		9.92	□□□□□ -0.82
SNT309	YPR101W	TIF4632	P39936	914 aa	Known RBP	9.9	□□□□□ -0.82
SNT309	YPR101W	SNQ2	P32568	1501 aa	Known RBP	9.9	□□□□□ -0.82
SNT309	YPR101W	HO	P09932	586 aa		9.89	□□□□□ -0.83
SNT309	YPR101W	TFC8	Q12308	588 aa		9.89	□□□□□ -0.83
SNT309	YPR101W	NUP170	P38181	1502 aa		9.88	□□□□□ -0.83
SNT309	YPR101W	DCD1	P06773	312 aa		9.87	□□□□□ -0.83
SNT309	YPR101W	TGL3	P40308	642 aa		9.87	□□□□□ -0.83
SNT309	YPR101W	TY2B-LR1	P0C2J3	1770 aa		9.86	□□□□□ -0.83
SNT309	YPR101W	TY2B-F	P0CX63	1770 aa		9.86	□□□□□ -0.83
SNT309	YPR101W	TY2B-GR2	P0CX64	1770 aa		9.86	□□□□□ -0.83
SNT309	YPR101W	TY2B-C	P25384	1770 aa		9.86	□□□□□ -0.83
SNT309	YPR101W	TY2B-DR2	Q03494	1770 aa		9.86	□□□□□ -0.83
SNT309	YPR101W	TY1B-DR1	Q03855	1755 aa		9.86	□□□□□ -0.83
SNT309	YPR101W	TY2B-DR3	Q07791	1770 aa	Known RBP	9.86	□□□□□ -0.83
SNT309	YPR101W	TY2B-OR1	Q12113	1770 aa		9.86	□□□□□ -0.83
SNT309	YPR101W	TY2B-DR1	Q12472	1770 aa		9.86	□□□□□ -0.83
SNT309	YPR101W	TY2B-OR2	Q12501	1770 aa		9.86	□□□□□ -0.83
SNT309	YPR101W	STH1	P32597	1359 aa		9.85	□□□□□ -0.83
SNT309	YPR101W	SPP41	P38904	1435 aa		9.84	□□□□□ -0.83
SNT309	YPR101W	TY1B-DR3	Q99231	1755 aa		9.84	□□□□□ -0.83
SNT309	YPR101W	MLP2	P40457	1679 aa		9.83	□□□□□ -0.84
SNT309	YPR101W	SCY1	P53009	804 aa		9.82	□□□□□ -0.84
SNT309	YPR101W	PDR15	Q04182	1529 aa	Known RBP	9.79	□□□□□ -0.84
SNT309	YPR101W	TY2B-B	Q12491	1770 aa		9.78	□□□□□ -0.84
SNT309	YPR101W	SLX5	P32828	619 aa	Known RBP	9.78	□□□□□ -0.84
SNT309	YPR101W	GEA1	P47102	1408 aa	Predicted RBP	9.75	□□□□□ -0.85

Retrieved 100 of 5,963 RNA–protein pairs in 51.2 ms