RNA–Protein interactions for RNA: YPL183C

RTT10, Transcript of WD40 domain-containing protein involved in endosomal recycling, yeastyeast

Gene RTT10, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT10YPL183C DRS1P32892 752 aaKnown RBP6.11□□□□□ -1.43
RTT10YPL183C MTC1P47018 478 aaKnown RBP5.99□□□□□ -1.45
RTT10YPL183C BFR2Q06631 534 aaKnown RBP5.34□□□□□ -1.55
RTT10YPL183C AVT3P36062 692 aa5.32□□□□□ -1.56
RTT10YPL183C TFA1P36100 482 aa5.31□□□□□ -1.56
RTT10YPL183C DIP2Q12220 943 aaPredicted RBP5.18□□□□□ -1.58
RTT10YPL183C INO80P53115 1489 aa4.94□□□□□ -1.62
RTT10YPL183C SPA2P23201 1466 aaKnown RBP4.93□□□□□ -1.62
RTT10YPL183C RQC2Q12532 1038 aaKnown RBP4.83□□□□□ -1.64
RTT10YPL183C RSE1Q04693 1361 aaKnown RBP4.77□□□□□ -1.65
RTT10YPL183C SGS1P35187 1447 aa4.76□□□□□ -1.65
RTT10YPL183C TY1B-DR4Q07793 1604 aa4.75□□□□□ -1.65
RTT10YPL183C PRI1P10363 409 aa4.75□□□□□ -1.65
RTT10YPL183C TCB3Q03640 1545 aaKnown RBP4.74□□□□□ -1.65
RTT10YPL183C RPG1P38249 964 aaKnown RBP4.7□□□□□ -1.66
RTT10YPL183C ISW2Q08773 1120 aa4.69□□□□□ -1.66
RTT10YPL183C SSN2P38931 1420 aa4.68□□□□□ -1.66
RTT10YPL183C SPT21P35209 758 aa4.65□□□□□ -1.67
RTT10YPL183C RIM101P33400 625 aa4.59□□□□□ -1.68
RTT10YPL183C RPL17AP05740 184 aaKnown RBP4.58□□□□□ -1.68
RTT10YPL183C RPL17BP46990 184 aaKnown RBP4.58□□□□□ -1.68
RTT10YPL183C SIN3P22579 1536 aa4.58□□□□□ -1.68
RTT10YPL183C FAP1P53971 965 aa4.57□□□□□ -1.68
RTT10YPL183C CHD1P32657 1468 aa4.55□□□□□ -1.68
RTT10YPL183C MON2P48563 1636 aaPredicted RBP4.53□□□□□ -1.68
RTT10YPL183C HSL1P34244 1518 aa4.53□□□□□ -1.68
RTT10YPL183C SKI3P17883 1432 aaKnown RBP4.53□□□□□ -1.68
RTT10YPL183C SPT6P23615 1451 aaKnown RBP4.51□□□□□ -1.69
RTT10YPL183C AAD16Q02895 342 aa4.51□□□□□ -1.69
RTT10YPL183C THO2P53552 1597 aaKnown RBP4.51□□□□□ -1.69
RTT10YPL183C REB1P21538 810 aa4.49□□□□□ -1.69
RTT10YPL183C XRN1P22147 1528 aaKnown RBP4.48□□□□□ -1.69
RTT10YPL183C OXP1P28273 1286 aa4.48□□□□□ -1.69
RTT10YPL183C SSK2P53599 1579 aa4.45□□□□□ -1.7
RTT10YPL183C HIR3P47171 1648 aa4.45□□□□□ -1.7
RTT10YPL183C YKR023WP36119 530 aaKnown RBP4.44□□□□□ -1.7
RTT10YPL183C PTP3P40048 928 aa4.44□□□□□ -1.7
RTT10YPL183C TSR3Q12094 313 aaKnown RBP4.43□□□□□ -1.7
RTT10YPL183C YCK3P39962 524 aa4.41□□□□□ -1.7
RTT10YPL183C SWR1Q05471 1514 aa4.41□□□□□ -1.7
RTT10YPL183C MYO2P19524 1574 aaKnown RBP4.41□□□□□ -1.7
RTT10YPL183C ESP1Q03018 1630 aa4.39□□□□□ -1.71
RTT10YPL183C REV3P14284 1504 aa4.38□□□□□ -1.71
RTT10YPL183C DMA1P38823 416 aa4.38□□□□□ -1.71
RTT10YPL183C YLR271WQ06152 274 aa4.35□□□□□ -1.71
RTT10YPL183C SSP1P38871 571 aa4.35□□□□□ -1.71
RTT10YPL183C NUP170P38181 1502 aa4.31□□□□□ -1.72
RTT10YPL183C ATG2P53855 1592 aa4.31□□□□□ -1.72
RTT10YPL183C POL1P13382 1468 aa4.31□□□□□ -1.72
RTT10YPL183C ECM5Q03214 1411 aa4.3□□□□□ -1.72
RTT10YPL183C YPK9Q12697 1472 aa4.3□□□□□ -1.72
RTT10YPL183C TFC8Q12308 588 aa4.29□□□□□ -1.72
RTT10YPL183C STU1P38198 1513 aa4.28□□□□□ -1.72
RTT10YPL183C MMS22Q06164 1454 aa4.28□□□□□ -1.72
RTT10YPL183C YAH1Q12184 172 aaKnown RBP4.28□□□□□ -1.72
RTT10YPL183C MYO4P32492 1471 aa4.27□□□□□ -1.73
RTT10YPL183C CDC27P38042 758 aa4.27□□□□□ -1.73
RTT10YPL183C PEP1P32319 1579 aa4.27□□□□□ -1.73
RTT10YPL183C YIL055CP40523 627 aaKnown RBP4.25□□□□□ -1.73
RTT10YPL183C SAS10Q12136 610 aaPredicted RBP4.25□□□□□ -1.73
RTT10YPL183C DCD1P06773 312 aa4.24□□□□□ -1.73
RTT10YPL183C KOG1P38873 1557 aa4.24□□□□□ -1.73
RTT10YPL183C PSD2P53037 1138 aaKnown RBP4.24□□□□□ -1.73
RTT10YPL183C HOP09932 586 aa4.23□□□□□ -1.73
RTT10YPL183C CST9Q06032 482 aa4.23□□□□□ -1.73
RTT10YPL183C PRY3P47033 881 aa4.23□□□□□ -1.73
RTT10YPL183C TY1B-DR3Q99231 1755 aa4.22□□□□□ -1.73
RTT10YPL183C YOR1P53049 1477 aa4.22□□□□□ -1.73
RTT10YPL183C BUD4P47136 1447 aa4.21□□□□□ -1.74
RTT10YPL183C RPO31P04051 1460 aa4.21□□□□□ -1.74
RTT10YPL183C ARP8Q12386 881 aaKnown RBP RIP-Chip data4.21□□□□□ -1.74not detected
RTT10YPL183C TY2B-LR1P0C2J3 1770 aa4.21□□□□□ -1.74
RTT10YPL183C TY2B-FP0CX63 1770 aa4.21□□□□□ -1.74
RTT10YPL183C TY2B-GR2P0CX64 1770 aa4.21□□□□□ -1.74
RTT10YPL183C TY2B-CP25384 1770 aa4.21□□□□□ -1.74
RTT10YPL183C TY2B-DR2Q03494 1770 aa4.21□□□□□ -1.74
RTT10YPL183C TY1B-DR1Q03855 1755 aa4.21□□□□□ -1.74
RTT10YPL183C TY2B-DR3Q07791 1770 aaKnown RBP4.21□□□□□ -1.74
RTT10YPL183C TY2B-OR1Q12113 1770 aa4.21□□□□□ -1.74
RTT10YPL183C TY2B-DR1Q12472 1770 aa4.21□□□□□ -1.74
RTT10YPL183C TY2B-OR2Q12501 1770 aa4.21□□□□□ -1.74
RTT10YPL183C UFD4P33202 1483 aa4.21□□□□□ -1.74
RTT10YPL183C RSM7P47150 247 aa4.2□□□□□ -1.74
RTT10YPL183C PDR10P51533 1564 aa4.2□□□□□ -1.74
RTT10YPL183C SMC4Q12267 1418 aa4.19□□□□□ -1.74
RTT10YPL183C DNA2P38859 1522 aa4.19□□□□□ -1.74
RTT10YPL183C MGA2P40578 1113 aa4.19□□□□□ -1.74
RTT10YPL183C TY2B-BQ12491 1770 aa4.19□□□□□ -1.74
RTT10YPL183C BCH2P36122 765 aa4.19□□□□□ -1.74
RTT10YPL183C SCC2Q04002 1493 aa4.18□□□□□ -1.74
RTT10YPL183C TY1B-HO13535 1793 aa4.18□□□□□ -1.74
RTT10YPL183C TY1B-DR5P0C2I2 1755 aa4.18□□□□□ -1.74
RTT10YPL183C TY1B-DR6P0C2I3 1755 aa4.18□□□□□ -1.74
RTT10YPL183C TY1B-LR2P0C2I5 1755 aa4.18□□□□□ -1.74
RTT10YPL183C TY1B-LR3P0C2I6 1755 aaKnown RBP4.18□□□□□ -1.74
RTT10YPL183C TY1B-PR1P0C2I9 1755 aaKnown RBP4.18□□□□□ -1.74
RTT10YPL183C TY1B-PR2P0C2J0 1756 aa4.18□□□□□ -1.74
RTT10YPL183C TY1B-PR3P0C2J1 1755 aaKnown RBP4.18□□□□□ -1.74
RTT10YPL183C TY1B-JR1P47098 1755 aa4.18□□□□□ -1.74
RTT10YPL183C TY1B-ML2Q03434 1755 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms