RNA–Protein interactions for RNA: YPL026C

SKS1, Transcript of Putative serine/threonine protein kinase, yeastyeast

Gene SKS1, Length 1,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKS1YPL026C FAP1P53971 965 aa15.64■□□□□ 0.09
SKS1YPL026C MTC1P47018 478 aaKnown RBP15.56■□□□□ 0.08
SKS1YPL026C PRY3P47033 881 aa14.71□□□□□ -0.05
SKS1YPL026C AAD16Q02895 342 aa14.05□□□□□ -0.16
SKS1YPL026C PRI1P10363 409 aa13.91□□□□□ -0.18
SKS1YPL026C HAA1Q12753 694 aaKnown RBP13.84□□□□□ -0.19
SKS1YPL026C DRS1P32892 752 aaKnown RBP13.8□□□□□ -0.2
SKS1YPL026C YCK3P39962 524 aa13.64□□□□□ -0.23
SKS1YPL026C ISW2Q08773 1120 aa13.32□□□□□ -0.28
SKS1YPL026C RPG1P38249 964 aaKnown RBP13.11□□□□□ -0.31
SKS1YPL026C TSR3Q12094 313 aaKnown RBP13.01□□□□□ -0.33
SKS1YPL026C MRPL32P25348 183 aa12.67□□□□□ -0.38
SKS1YPL026C YGL015CP33199 130 aa12.57□□□□□ -0.4
SKS1YPL026C BUD31P25337 157 aaPredicted RBP12.08□□□□□ -0.48
SKS1YPL026C INO80P53115 1489 aa12.08□□□□□ -0.48
SKS1YPL026C RSE1Q04693 1361 aaKnown RBP12.07□□□□□ -0.48
SKS1YPL026C MON2P48563 1636 aaPredicted RBP12.06□□□□□ -0.48
SKS1YPL026C DIP2Q12220 943 aaPredicted RBP12.02□□□□□ -0.48
SKS1YPL026C REB1P21538 810 aa11.87□□□□□ -0.51
SKS1YPL026C BFR2Q06631 534 aaKnown RBP11.73□□□□□ -0.53
SKS1YPL026C RPL17AP05740 184 aaKnown RBP11.71□□□□□ -0.53
SKS1YPL026C RPL17BP46990 184 aaKnown RBP11.71□□□□□ -0.53
SKS1YPL026C UBP10P53874 792 aaPredicted RBP11.64□□□□□ -0.55
SKS1YPL026C TCB3Q03640 1545 aaKnown RBP11.63□□□□□ -0.55
SKS1YPL026C AVT3P36062 692 aa11.62□□□□□ -0.55
SKS1YPL026C CDC27P38042 758 aa11.59□□□□□ -0.55
SKS1YPL026C SGS1P35187 1447 aa11.59□□□□□ -0.55
SKS1YPL026C SWR1Q05471 1514 aa11.55□□□□□ -0.56
SKS1YPL026C TY1B-DR4Q07793 1604 aa11.53□□□□□ -0.56
SKS1YPL026C DNA2P38859 1522 aa11.49□□□□□ -0.57
SKS1YPL026C MAP2P38174 421 aaKnown RBP11.45□□□□□ -0.58
SKS1YPL026C SIS1P25294 352 aaKnown RBP11.42□□□□□ -0.58
SKS1YPL026C KOG1P38873 1557 aa11.36□□□□□ -0.59
SKS1YPL026C UBP9P39967 754 aa11.35□□□□□ -0.59
SKS1YPL026C TIF4632P39936 914 aaKnown RBP11.25□□□□□ -0.61
SKS1YPL026C YKR023WP36119 530 aaKnown RBP11.24□□□□□ -0.61
SKS1YPL026C HSL1P34244 1518 aa11.17□□□□□ -0.62
SKS1YPL026C TGL3P40308 642 aa11.17□□□□□ -0.62
SKS1YPL026C SPT6P23615 1451 aaKnown RBP11.17□□□□□ -0.62
SKS1YPL026C SPA2P23201 1466 aaKnown RBP11.09□□□□□ -0.63
SKS1YPL026C TFC8Q12308 588 aa11.05□□□□□ -0.64
SKS1YPL026C SPT21P35209 758 aa11.04□□□□□ -0.64
SKS1YPL026C SLX5P32828 619 aaKnown RBP11.01□□□□□ -0.65
SKS1YPL026C HOP09932 586 aa11□□□□□ -0.65
SKS1YPL026C SCY1P53009 804 aa10.99□□□□□ -0.65
SKS1YPL026C HIR3P47171 1648 aa10.94□□□□□ -0.66
SKS1YPL026C DCD1P06773 312 aa10.93□□□□□ -0.66
SKS1YPL026C ECM5Q03214 1411 aa10.88□□□□□ -0.67
SKS1YPL026C BUD4P47136 1447 aa10.82□□□□□ -0.68
SKS1YPL026C THO2P53552 1597 aaKnown RBP10.8□□□□□ -0.68
SKS1YPL026C XRN1P22147 1528 aaKnown RBP10.79□□□□□ -0.68
SKS1YPL026C TFA1P36100 482 aa10.74□□□□□ -0.69
SKS1YPL026C SSN2P38931 1420 aa10.74□□□□□ -0.69
SKS1YPL026C MDS3P53094 1487 aa10.66□□□□□ -0.7
SKS1YPL026C BCH2P36122 765 aa10.62□□□□□ -0.71
SKS1YPL026C REV3P14284 1504 aa10.58□□□□□ -0.72
SKS1YPL026C PEP1P32319 1579 aa10.57□□□□□ -0.72
SKS1YPL026C ATG2P53855 1592 aa10.53□□□□□ -0.72
SKS1YPL026C MST1P07236 462 aa10.48□□□□□ -0.73
SKS1YPL026C YBL029C-AQ3E756 94 aa10.47□□□□□ -0.73
SKS1YPL026C TAF2P23255 1407 aa10.47□□□□□ -0.73
SKS1YPL026C SIN3P22579 1536 aa10.46□□□□□ -0.73
SKS1YPL026C SKI3P17883 1432 aaKnown RBP10.44□□□□□ -0.74
SKS1YPL026C YOR238WQ08634 303 aa10.42□□□□□ -0.74
SKS1YPL026C RIM101P33400 625 aa10.4□□□□□ -0.74
SKS1YPL026C BPT1P14772 1559 aa10.38□□□□□ -0.75
SKS1YPL026C SSK2P53599 1579 aa10.38□□□□□ -0.75
SKS1YPL026C VNX1P42839 908 aa10.34□□□□□ -0.75
SKS1YPL026C ESP1Q03018 1630 aa10.32□□□□□ -0.76
SKS1YPL026C YJL171CP46992 396 aa10.31□□□□□ -0.76
SKS1YPL026C SPP1Q03012 353 aa10.3□□□□□ -0.76
SKS1YPL026C EPS1P40557 701 aa10.28□□□□□ -0.76
SKS1YPL026C BDF1P35817 686 aa10.27□□□□□ -0.77
SKS1YPL026C NSR1P27476 414 aaKnown RBP RIP-Chip data10.26□□□□□ -0.77not detected
SKS1YPL026C UFD4P33202 1483 aa10.23□□□□□ -0.77
SKS1YPL026C YPK9Q12697 1472 aa10.22□□□□□ -0.77
SKS1YPL026C MYO2P19524 1574 aaKnown RBP10.21□□□□□ -0.78
SKS1YPL026C YCF1P39109 1515 aaKnown RBP10.21□□□□□ -0.78
SKS1YPL026C SCC2Q04002 1493 aa10.18□□□□□ -0.78
SKS1YPL026C AIR2Q12476 344 aaKnown RBP10.17□□□□□ -0.78
SKS1YPL026C YAP5P40574 245 aa10.15□□□□□ -0.78
SKS1YPL026C RPO31P04051 1460 aa10.14□□□□□ -0.79
SKS1YPL026C FKH1P40466 484 aa10.12□□□□□ -0.79
SKS1YPL026C WSC3Q12215 556 aa10.12□□□□□ -0.79
SKS1YPL026C TIF11P38912 153 aaKnown RBP10.09□□□□□ -0.79
SKS1YPL026C CHD1P32657 1468 aa10.05□□□□□ -0.8
SKS1YPL026C CDC25P04821 1589 aa10.02□□□□□ -0.81
SKS1YPL026C TOP2P06786 1428 aaKnown RBP10.01□□□□□ -0.81
SKS1YPL026C RQC2Q12532 1038 aaKnown RBP10.01□□□□□ -0.81
SKS1YPL026C TY2B-LR1P0C2J3 1770 aa10.01□□□□□ -0.81
SKS1YPL026C TY2B-FP0CX63 1770 aa10.01□□□□□ -0.81
SKS1YPL026C TY2B-GR2P0CX64 1770 aa10.01□□□□□ -0.81
SKS1YPL026C TY2B-CP25384 1770 aa10.01□□□□□ -0.81
SKS1YPL026C TY2B-DR2Q03494 1770 aa10.01□□□□□ -0.81
SKS1YPL026C TY1B-DR1Q03855 1755 aa10.01□□□□□ -0.81
SKS1YPL026C TY2B-DR3Q07791 1770 aaKnown RBP10.01□□□□□ -0.81
SKS1YPL026C TY2B-OR1Q12113 1770 aa10.01□□□□□ -0.81
SKS1YPL026C TY2B-DR1Q12472 1770 aa10.01□□□□□ -0.81
SKS1YPL026C TY2B-OR2Q12501 1770 aa10.01□□□□□ -0.81
SKS1YPL026C GTT3P39996 337 aa10□□□□□ -0.81
Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms