RNA–Protein interactions for RNA: YOR042W

CUE5, Transcript of Ubiquitin-binding protein, yeastyeast

Gene CUE5, Length 1,236 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUE5YOR042W MTC1P47018 478 aaKnown RBP12.51□□□□□ -0.41
CUE5YOR042W DRS1P32892 752 aaKnown RBP12.5□□□□□ -0.41
CUE5YOR042W BFR2Q06631 534 aaKnown RBP10.77□□□□□ -0.69
CUE5YOR042W DIP2Q12220 943 aaPredicted RBP10.67□□□□□ -0.7
CUE5YOR042W AVT3P36062 692 aa10.48□□□□□ -0.73
CUE5YOR042W FAP1P53971 965 aa10.43□□□□□ -0.74
CUE5YOR042W ISW2Q08773 1120 aa10.23□□□□□ -0.77
CUE5YOR042W PRI1P10363 409 aa10.1□□□□□ -0.79
CUE5YOR042W RSE1Q04693 1361 aaKnown RBP10.1□□□□□ -0.79
CUE5YOR042W RPG1P38249 964 aaKnown RBP10.09□□□□□ -0.79
CUE5YOR042W TFA1P36100 482 aa10.04□□□□□ -0.8
CUE5YOR042W AAD16Q02895 342 aa9.95□□□□□ -0.82
CUE5YOR042W PRY3P47033 881 aa9.74□□□□□ -0.85
CUE5YOR042W RPL17AP05740 184 aaKnown RBP9.72□□□□□ -0.85
CUE5YOR042W RPL17BP46990 184 aaKnown RBP9.72□□□□□ -0.85
CUE5YOR042W REB1P21538 810 aa9.63□□□□□ -0.87
CUE5YOR042W TSR3Q12094 313 aaKnown RBP9.6□□□□□ -0.87
CUE5YOR042W SPT21P35209 758 aa9.32□□□□□ -0.92
CUE5YOR042W MON2P48563 1636 aaPredicted RBP9.27□□□□□ -0.92
CUE5YOR042W MRPL32P25348 183 aa9.25□□□□□ -0.93
CUE5YOR042W RIM101P33400 625 aa9.19□□□□□ -0.94
CUE5YOR042W SGS1P35187 1447 aa9.17□□□□□ -0.94
CUE5YOR042W YCK3P39962 524 aa9.17□□□□□ -0.94
CUE5YOR042W HAA1Q12753 694 aaKnown RBP9.17□□□□□ -0.94
CUE5YOR042W INO80P53115 1489 aa9.14□□□□□ -0.95
CUE5YOR042W TCB3Q03640 1545 aaKnown RBP9.12□□□□□ -0.95
CUE5YOR042W TY1B-DR4Q07793 1604 aa9.11□□□□□ -0.95
CUE5YOR042W YKR023WP36119 530 aaKnown RBP9.05□□□□□ -0.96
CUE5YOR042W SWR1Q05471 1514 aa8.96□□□□□ -0.97
CUE5YOR042W OXP1P28273 1286 aa8.9□□□□□ -0.98
CUE5YOR042W HOP09932 586 aa8.89□□□□□ -0.99
CUE5YOR042W CDC27P38042 758 aa8.88□□□□□ -0.99
CUE5YOR042W TFC8Q12308 588 aa8.87□□□□□ -0.99
CUE5YOR042W HSL1P34244 1518 aa8.85□□□□□ -0.99
CUE5YOR042W PTP3P40048 928 aa8.85□□□□□ -0.99
CUE5YOR042W YIL055CP40523 627 aaKnown RBP8.83□□□□□ -1
CUE5YOR042W DCD1P06773 312 aa8.82□□□□□ -1
CUE5YOR042W SPT6P23615 1451 aaKnown RBP8.8□□□□□ -1
CUE5YOR042W YAH1Q12184 172 aaKnown RBP8.79□□□□□ -1
CUE5YOR042W SSP1P38871 571 aa8.76□□□□□ -1.01
CUE5YOR042W DNA2P38859 1522 aa8.75□□□□□ -1.01
CUE5YOR042W KOG1P38873 1557 aa8.73□□□□□ -1.01
CUE5YOR042W SPA2P23201 1466 aaKnown RBP8.71□□□□□ -1.01
CUE5YOR042W SSN2P38931 1420 aa8.68□□□□□ -1.02
CUE5YOR042W HIR3P47171 1648 aa8.68□□□□□ -1.02
CUE5YOR042W RSM7P47150 247 aa8.66□□□□□ -1.02
CUE5YOR042W YGL015CP33199 130 aa8.65□□□□□ -1.02
CUE5YOR042W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.65□□□□□ -1.02not detected
CUE5YOR042W YLR271WQ06152 274 aa8.64□□□□□ -1.03
CUE5YOR042W BCH2P36122 765 aa8.62□□□□□ -1.03
CUE5YOR042W UBP10P53874 792 aaPredicted RBP8.54□□□□□ -1.04
CUE5YOR042W MAP2P38174 421 aaKnown RBP8.53□□□□□ -1.04
CUE5YOR042W XRN1P22147 1528 aaKnown RBP8.53□□□□□ -1.04
CUE5YOR042W AI2P03876 854 aa8.51□□□□□ -1.05
CUE5YOR042W SCY1P53009 804 aa8.51□□□□□ -1.05
CUE5YOR042W BBC1P47068 1157 aa8.49□□□□□ -1.05
CUE5YOR042W THO2P53552 1597 aaKnown RBP8.48□□□□□ -1.05
CUE5YOR042W EPS1P40557 701 aa8.47□□□□□ -1.05
CUE5YOR042W MGA2P40578 1113 aa8.46□□□□□ -1.06
CUE5YOR042W RQC2Q12532 1038 aaKnown RBP8.46□□□□□ -1.06
CUE5YOR042W REV3P14284 1504 aa8.44□□□□□ -1.06
CUE5YOR042W BUD4P47136 1447 aa8.42□□□□□ -1.06
CUE5YOR042W BDF1P35817 686 aa8.41□□□□□ -1.06
CUE5YOR042W PSD2P53037 1138 aaKnown RBP8.41□□□□□ -1.06
CUE5YOR042W SIN3P22579 1536 aa8.39□□□□□ -1.07
CUE5YOR042W CST9Q06032 482 aa8.38□□□□□ -1.07
CUE5YOR042W SLX5P32828 619 aaKnown RBP8.37□□□□□ -1.07
CUE5YOR042W ECM5Q03214 1411 aa8.37□□□□□ -1.07
CUE5YOR042W ATG2P53855 1592 aa8.35□□□□□ -1.07
CUE5YOR042W SSK2P53599 1579 aa8.34□□□□□ -1.07
CUE5YOR042W MDS3P53094 1487 aa8.33□□□□□ -1.08
CUE5YOR042W PEP1P32319 1579 aa8.31□□□□□ -1.08
CUE5YOR042W ESP1Q03018 1630 aa8.29□□□□□ -1.08
CUE5YOR042W MRM1P25270 412 aa8.26□□□□□ -1.09
CUE5YOR042W DMA1P38823 416 aa8.26□□□□□ -1.09
CUE5YOR042W TAF2P23255 1407 aa8.24□□□□□ -1.09
CUE5YOR042W MYO2P19524 1574 aaKnown RBP8.22□□□□□ -1.09
CUE5YOR042W TIF4632P39936 914 aaKnown RBP8.22□□□□□ -1.09
CUE5YOR042W SKI3P17883 1432 aaKnown RBP8.16□□□□□ -1.1
CUE5YOR042W RTG3P38165 486 aa8.14□□□□□ -1.11
CUE5YOR042W TGL3P40308 642 aa8.14□□□□□ -1.11
CUE5YOR042W YPK9Q12697 1472 aa8.12□□□□□ -1.11
CUE5YOR042W RCR1P38212 213 aa8.09□□□□□ -1.11
CUE5YOR042W SCC2Q04002 1493 aa8.07□□□□□ -1.12
CUE5YOR042W BPT1P14772 1559 aa8.07□□□□□ -1.12
CUE5YOR042W RAM2P29703 316 aa8.05□□□□□ -1.12
CUE5YOR042W TY2B-LR1P0C2J3 1770 aa8.05□□□□□ -1.12
CUE5YOR042W TY2B-FP0CX63 1770 aa8.05□□□□□ -1.12
CUE5YOR042W TY2B-GR2P0CX64 1770 aa8.05□□□□□ -1.12
CUE5YOR042W TY2B-CP25384 1770 aa8.05□□□□□ -1.12
CUE5YOR042W TY2B-DR2Q03494 1770 aa8.05□□□□□ -1.12
CUE5YOR042W TY1B-DR1Q03855 1755 aa8.05□□□□□ -1.12
CUE5YOR042W TY2B-DR3Q07791 1770 aaKnown RBP8.05□□□□□ -1.12
CUE5YOR042W TY2B-OR1Q12113 1770 aa8.05□□□□□ -1.12
CUE5YOR042W TY2B-DR1Q12472 1770 aa8.05□□□□□ -1.12
CUE5YOR042W TY2B-OR2Q12501 1770 aa8.05□□□□□ -1.12
CUE5YOR042W VPS29P38759 282 aa8.03□□□□□ -1.12
CUE5YOR042W RPO31P04051 1460 aa8□□□□□ -1.13
CUE5YOR042W UFD4P33202 1483 aa8□□□□□ -1.13
CUE5YOR042W YMR1P47147 688 aaKnown RBP RIP-Chip data8□□□□□ -1.13not detected
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms