RNA–Protein interactions for RNA: YNL301C

RPL18B, Transcript of Ribosomal 60S subunit protein L18B, yeastyeast

Gene RPL18B, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL18BYNL301C MTC1P47018 478 aaKnown RBP11.01□□□□□ -0.65
RPL18BYNL301C DRS1P32892 752 aaKnown RBP10.79□□□□□ -0.68
RPL18BYNL301C DIP2Q12220 943 aaPredicted RBP9.27□□□□□ -0.93
RPL18BYNL301C FAP1P53971 965 aa9.25□□□□□ -0.93
RPL18BYNL301C BFR2Q06631 534 aaKnown RBP9.24□□□□□ -0.93
RPL18BYNL301C AVT3P36062 692 aa9.12□□□□□ -0.95
RPL18BYNL301C ISW2Q08773 1120 aa9.01□□□□□ -0.97
RPL18BYNL301C PRI1P10363 409 aa8.98□□□□□ -0.97
RPL18BYNL301C RPG1P38249 964 aaKnown RBP8.87□□□□□ -0.99
RPL18BYNL301C AAD16Q02895 342 aa8.86□□□□□ -0.99
RPL18BYNL301C RSE1Q04693 1361 aaKnown RBP8.84□□□□□ -0.99
RPL18BYNL301C PRY3P47033 881 aa8.66□□□□□ -1.02
RPL18BYNL301C TFA1P36100 482 aa8.57□□□□□ -1.04
RPL18BYNL301C RPL17AP05740 184 aaKnown RBP8.5□□□□□ -1.05
RPL18BYNL301C RPL17BP46990 184 aaKnown RBP8.5□□□□□ -1.05
RPL18BYNL301C TSR3Q12094 313 aaKnown RBP8.48□□□□□ -1.05
RPL18BYNL301C REB1P21538 810 aa8.41□□□□□ -1.06
RPL18BYNL301C YCK3P39962 524 aa8.22□□□□□ -1.09
RPL18BYNL301C HAA1Q12753 694 aaKnown RBP8.22□□□□□ -1.09
RPL18BYNL301C SPT21P35209 758 aa8.2□□□□□ -1.1
RPL18BYNL301C MRPL32P25348 183 aa8.18□□□□□ -1.1
RPL18BYNL301C RIM101P33400 625 aa8.05□□□□□ -1.12
RPL18BYNL301C YKR023WP36119 530 aaKnown RBP7.97□□□□□ -1.13
RPL18BYNL301C CDC27P38042 758 aa7.85□□□□□ -1.15
RPL18BYNL301C MON2P48563 1636 aaPredicted RBP7.84□□□□□ -1.15
RPL18BYNL301C TFC8Q12308 588 aa7.82□□□□□ -1.16
RPL18BYNL301C HOP09932 586 aa7.78□□□□□ -1.16
RPL18BYNL301C OXP1P28273 1286 aa7.76□□□□□ -1.17
RPL18BYNL301C YGL015CP33199 130 aa7.71□□□□□ -1.18
RPL18BYNL301C DCD1P06773 312 aa7.7□□□□□ -1.18
RPL18BYNL301C YIL055CP40523 627 aaKnown RBP7.66□□□□□ -1.18
RPL18BYNL301C INO80P53115 1489 aa7.61□□□□□ -1.19
RPL18BYNL301C PTP3P40048 928 aa7.6□□□□□ -1.19
RPL18BYNL301C UBP10P53874 792 aaPredicted RBP7.6□□□□□ -1.19
RPL18BYNL301C YAH1Q12184 172 aaKnown RBP7.58□□□□□ -1.2
RPL18BYNL301C BCH2P36122 765 aa7.57□□□□□ -1.2
RPL18BYNL301C SSP1P38871 571 aa7.57□□□□□ -1.2
RPL18BYNL301C RSM7P47150 247 aa7.55□□□□□ -1.2
RPL18BYNL301C TY1B-DR4Q07793 1604 aa7.54□□□□□ -1.2
RPL18BYNL301C MAP2P38174 421 aaKnown RBP7.54□□□□□ -1.2
RPL18BYNL301C YLR271WQ06152 274 aa7.51□□□□□ -1.21
RPL18BYNL301C TCB3Q03640 1545 aaKnown RBP7.49□□□□□ -1.21
RPL18BYNL301C SCY1P53009 804 aa7.49□□□□□ -1.21
RPL18BYNL301C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.48□□□□□ -1.21not detected
RPL18BYNL301C SWR1Q05471 1514 aa7.45□□□□□ -1.22
RPL18BYNL301C AI2P03876 854 aa7.43□□□□□ -1.22
RPL18BYNL301C EPS1P40557 701 aa7.43□□□□□ -1.22
RPL18BYNL301C BBC1P47068 1157 aa7.41□□□□□ -1.22
RPL18BYNL301C SLX5P32828 619 aaKnown RBP7.38□□□□□ -1.23
RPL18BYNL301C BDF1P35817 686 aa7.38□□□□□ -1.23
RPL18BYNL301C PSD2P53037 1138 aaKnown RBP7.35□□□□□ -1.23
RPL18BYNL301C MGA2P40578 1113 aa7.33□□□□□ -1.24
RPL18BYNL301C KOG1P38873 1557 aa7.33□□□□□ -1.24
RPL18BYNL301C SGS1P35187 1447 aa7.32□□□□□ -1.24
RPL18BYNL301C DNA2P38859 1522 aa7.32□□□□□ -1.24
RPL18BYNL301C TIF4632P39936 914 aaKnown RBP7.28□□□□□ -1.24
RPL18BYNL301C CST9Q06032 482 aa7.26□□□□□ -1.25
RPL18BYNL301C TGL3P40308 642 aa7.25□□□□□ -1.25
RPL18BYNL301C HSL1P34244 1518 aa7.23□□□□□ -1.25
RPL18BYNL301C MRM1P25270 412 aa7.18□□□□□ -1.26
RPL18BYNL301C BUD31P25337 157 aaPredicted RBP7.17□□□□□ -1.26
RPL18BYNL301C SPT6P23615 1451 aaKnown RBP7.17□□□□□ -1.26
RPL18BYNL301C NSR1P27476 414 aaKnown RBP RIP-Chip data7.12□□□□□ -1.27not detected
RPL18BYNL301C RQC2Q12532 1038 aaKnown RBP7.1□□□□□ -1.27
RPL18BYNL301C RTG3P38165 486 aa7.09□□□□□ -1.27
RPL18BYNL301C HIR3P47171 1648 aa7.06□□□□□ -1.28
RPL18BYNL301C YAP5P40574 245 aa7.04□□□□□ -1.28
RPL18BYNL301C SPA2P23201 1466 aaKnown RBP7.04□□□□□ -1.28
RPL18BYNL301C VPS29P38759 282 aa7.03□□□□□ -1.28
RPL18BYNL301C MST1P07236 462 aa7.02□□□□□ -1.29
RPL18BYNL301C RCR1P38212 213 aa7.02□□□□□ -1.29
RPL18BYNL301C THO2P53552 1597 aaKnown RBP7.02□□□□□ -1.29
RPL18BYNL301C YOR238WQ08634 303 aa7.01□□□□□ -1.29
RPL18BYNL301C YMR1P47147 688 aaKnown RBP RIP-Chip data6.99□□□□□ -1.29not detected
RPL18BYNL301C RAM2P29703 316 aa6.98□□□□□ -1.29
RPL18BYNL301C DBP1P24784 617 aaKnown RBP6.93□□□□□ -1.3
RPL18BYNL301C MAK11P20484 414 aaKnown RBP6.92□□□□□ -1.3
RPL18BYNL301C STS1P38637 319 aa6.92□□□□□ -1.3
RPL18BYNL301C DMA1P38823 416 aa6.92□□□□□ -1.3
RPL18BYNL301C BUD4P47136 1447 aa6.92□□□□□ -1.3
RPL18BYNL301C YFR006WP43590 535 aa6.89□□□□□ -1.31
RPL18BYNL301C PIB1Q06651 286 aa6.88□□□□□ -1.31
RPL18BYNL301C PEP1P32319 1579 aa6.87□□□□□ -1.31
RPL18BYNL301C XRN1P22147 1528 aaKnown RBP6.87□□□□□ -1.31
RPL18BYNL301C MDS3P53094 1487 aa6.87□□□□□ -1.31
RPL18BYNL301C UBP9P39967 754 aa6.86□□□□□ -1.31
RPL18BYNL301C ATG2P53855 1592 aa6.86□□□□□ -1.31
RPL18BYNL301C ECM5Q03214 1411 aa6.85□□□□□ -1.31
RPL18BYNL301C GTT3P39996 337 aa6.85□□□□□ -1.31
RPL18BYNL301C SIN3P22579 1536 aa6.84□□□□□ -1.31
RPL18BYNL301C SSN2P38931 1420 aa6.84□□□□□ -1.32
RPL18BYNL301C VMA1P17255 1071 aaKnown RBP6.83□□□□□ -1.32
RPL18BYNL301C REV3P14284 1504 aa6.82□□□□□ -1.32
RPL18BYNL301C TAF7Q05021 590 aa6.82□□□□□ -1.32
RPL18BYNL301C COQ8P27697 501 aa6.81□□□□□ -1.32
RPL18BYNL301C SAM3Q08986 587 aa6.8□□□□□ -1.32
RPL18BYNL301C NOP53Q12080 455 aaKnown RBP6.8□□□□□ -1.32
RPL18BYNL301C SSK2P53599 1579 aa6.78□□□□□ -1.32
RPL18BYNL301C MIF2P35201 549 aa6.78□□□□□ -1.32
RPL18BYNL301C SET1P38827 1080 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms