RNA–Protein interactions for RNA: YNL049C

SFB2, Transcript of Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB2, Length 2,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB2YNL049C FAP1P53971 965 aa5.57□□□□□ -1.52
SFB2YNL049C PRY3P47033 881 aa5.27□□□□□ -1.57
SFB2YNL049C MTC1P47018 478 aaKnown RBP5.05□□□□□ -1.6
SFB2YNL049C YCK3P39962 524 aa4.89□□□□□ -1.63
SFB2YNL049C HAA1Q12753 694 aaKnown RBP4.85□□□□□ -1.63
SFB2YNL049C AAD16Q02895 342 aa4.83□□□□□ -1.64
SFB2YNL049C PRI1P10363 409 aa4.73□□□□□ -1.65
SFB2YNL049C DRS1P32892 752 aaKnown RBP4.65□□□□□ -1.67
SFB2YNL049C TSR3Q12094 313 aaKnown RBP4.47□□□□□ -1.69
SFB2YNL049C RPG1P38249 964 aaKnown RBP4.39□□□□□ -1.71
SFB2YNL049C ISW2Q08773 1120 aa4.38□□□□□ -1.71
SFB2YNL049C BUD31P25337 157 aaPredicted RBP4.33□□□□□ -1.72
SFB2YNL049C YGL015CP33199 130 aa4.33□□□□□ -1.72
SFB2YNL049C MON2P48563 1636 aaPredicted RBP4.32□□□□□ -1.72
SFB2YNL049C MRPL32P25348 183 aa4.29□□□□□ -1.72
SFB2YNL049C BFR2Q06631 534 aaKnown RBP4.09□□□□□ -1.75
SFB2YNL049C SIS1P25294 352 aaKnown RBP4.08□□□□□ -1.76
SFB2YNL049C INO80P53115 1489 aa4.06□□□□□ -1.76
SFB2YNL049C KOG1P38873 1557 aa4.01□□□□□ -1.77
SFB2YNL049C TFA1P36100 482 aa3.97□□□□□ -1.77
SFB2YNL049C TY1B-DR4Q07793 1604 aa3.97□□□□□ -1.77
SFB2YNL049C TCB3Q03640 1545 aaKnown RBP3.96□□□□□ -1.78
SFB2YNL049C SWR1Q05471 1514 aa3.96□□□□□ -1.78
SFB2YNL049C CDC27P38042 758 aa3.91□□□□□ -1.78
SFB2YNL049C DNA2P38859 1522 aa3.91□□□□□ -1.78
SFB2YNL049C AVT3P36062 692 aa3.91□□□□□ -1.78
SFB2YNL049C MAP2P38174 421 aaKnown RBP3.9□□□□□ -1.79
SFB2YNL049C DIP2Q12220 943 aaPredicted RBP3.9□□□□□ -1.79
SFB2YNL049C UBP9P39967 754 aa3.89□□□□□ -1.79
SFB2YNL049C UBP10P53874 792 aaPredicted RBP3.87□□□□□ -1.79
SFB2YNL049C REB1P21538 810 aa3.85□□□□□ -1.79
SFB2YNL049C RSE1Q04693 1361 aaKnown RBP3.83□□□□□ -1.8
SFB2YNL049C RPL17AP05740 184 aaKnown RBP3.78□□□□□ -1.8
SFB2YNL049C RPL17BP46990 184 aaKnown RBP3.78□□□□□ -1.8
SFB2YNL049C THO2P53552 1597 aaKnown RBP3.78□□□□□ -1.8
SFB2YNL049C TIF4632P39936 914 aaKnown RBP3.74□□□□□ -1.81
SFB2YNL049C TGL3P40308 642 aa3.73□□□□□ -1.81
SFB2YNL049C SPA2P23201 1466 aaKnown RBP3.72□□□□□ -1.81
SFB2YNL049C HSL1P34244 1518 aa3.68□□□□□ -1.82
SFB2YNL049C YKR023WP36119 530 aaKnown RBP3.68□□□□□ -1.82
SFB2YNL049C SCY1P53009 804 aa3.67□□□□□ -1.82
SFB2YNL049C DCD1P06773 312 aa3.66□□□□□ -1.82
SFB2YNL049C SLX5P32828 619 aaKnown RBP3.66□□□□□ -1.82
SFB2YNL049C SSK2P53599 1579 aa3.65□□□□□ -1.83
SFB2YNL049C HOP09932 586 aa3.65□□□□□ -1.83
SFB2YNL049C SPT6P23615 1451 aaKnown RBP3.64□□□□□ -1.83
SFB2YNL049C PEP1P32319 1579 aa3.64□□□□□ -1.83
SFB2YNL049C BUD4P47136 1447 aa3.62□□□□□ -1.83
SFB2YNL049C REV3P14284 1504 aa3.61□□□□□ -1.83
SFB2YNL049C TFC8Q12308 588 aa3.6□□□□□ -1.83
SFB2YNL049C MDS3P53094 1487 aa3.6□□□□□ -1.83
SFB2YNL049C YBL029C-AQ3E756 94 aa3.58□□□□□ -1.84
SFB2YNL049C HIR3P47171 1648 aa3.58□□□□□ -1.84
SFB2YNL049C SGS1P35187 1447 aa3.57□□□□□ -1.84
SFB2YNL049C SIN3P22579 1536 aa3.55□□□□□ -1.84
SFB2YNL049C ATG2P53855 1592 aa3.53□□□□□ -1.84
SFB2YNL049C MYO2P19524 1574 aaKnown RBP3.52□□□□□ -1.85
SFB2YNL049C YJL171CP46992 396 aa3.52□□□□□ -1.85
SFB2YNL049C ECM5Q03214 1411 aa3.52□□□□□ -1.85
SFB2YNL049C BPT1P14772 1559 aa3.52□□□□□ -1.85
SFB2YNL049C SPT21P35209 758 aa3.51□□□□□ -1.85
SFB2YNL049C RQC2Q12532 1038 aaKnown RBP3.49□□□□□ -1.85
SFB2YNL049C YCF1P39109 1515 aaKnown RBP3.48□□□□□ -1.85
SFB2YNL049C VNX1P42839 908 aa3.48□□□□□ -1.85
SFB2YNL049C MET5P47169 1442 aa3.47□□□□□ -1.85
SFB2YNL049C SPP1Q03012 353 aa3.47□□□□□ -1.85
SFB2YNL049C AIR2Q12476 344 aaKnown RBP3.47□□□□□ -1.85
SFB2YNL049C BCH2P36122 765 aa3.46□□□□□ -1.86
SFB2YNL049C LTE1P07866 1435 aa3.45□□□□□ -1.86
SFB2YNL049C ESC1Q03661 1658 aaKnown RBP3.45□□□□□ -1.86
SFB2YNL049C MST1P07236 462 aa3.45□□□□□ -1.86
SFB2YNL049C YOR238WQ08634 303 aa3.43□□□□□ -1.86
SFB2YNL049C ESP1Q03018 1630 aa3.43□□□□□ -1.86
SFB2YNL049C DNF1P32660 1571 aa3.42□□□□□ -1.86
SFB2YNL049C WSC3Q12215 556 aa3.42□□□□□ -1.86
SFB2YNL049C MIF2P35201 549 aa3.41□□□□□ -1.86
SFB2YNL049C FKH1P40466 484 aa3.41□□□□□ -1.86
SFB2YNL049C RPA190P10964 1664 aaKnown RBP3.4□□□□□ -1.87
SFB2YNL049C RKR1Q04781 1562 aa3.39□□□□□ -1.87
SFB2YNL049C IRC20Q06554 1556 aa3.39□□□□□ -1.87
SFB2YNL049C CDC25P04821 1589 aa3.39□□□□□ -1.87
SFB2YNL049C XRN1P22147 1528 aaKnown RBP3.38□□□□□ -1.87
SFB2YNL049C BMT6Q12291 365 aa3.38□□□□□ -1.87
SFB2YNL049C YPK9Q12697 1472 aa3.37□□□□□ -1.87
SFB2YNL049C PTP3P40048 928 aa3.37□□□□□ -1.87
SFB2YNL049C BNI1P41832 1953 aa3.36□□□□□ -1.87
SFB2YNL049C RIM101P33400 625 aa3.36□□□□□ -1.87
SFB2YNL049C TY1B-BRQ12193 1756 aa3.36□□□□□ -1.87
SFB2YNL049C TY1B-GR3Q12316 1755 aa3.36□□□□□ -1.87
SFB2YNL049C TY1B-ORQ92393 1755 aa3.36□□□□□ -1.87
SFB2YNL049C TIF11P38912 153 aaKnown RBP3.36□□□□□ -1.87
SFB2YNL049C DMA1P38823 416 aa3.35□□□□□ -1.87
SFB2YNL049C RPO31P04051 1460 aa3.35□□□□□ -1.87
SFB2YNL049C GEA2P39993 1459 aaKnown RBP3.34□□□□□ -1.88
SFB2YNL049C BDF1P35817 686 aa3.32□□□□□ -1.88
SFB2YNL049C LDB19Q12502 818 aa3.32□□□□□ -1.88
SFB2YNL049C TY2B-LR1P0C2J3 1770 aa3.32□□□□□ -1.88
SFB2YNL049C TY2B-FP0CX63 1770 aa3.32□□□□□ -1.88
SFB2YNL049C TY2B-GR2P0CX64 1770 aa3.32□□□□□ -1.88
SFB2YNL049C TY2B-CP25384 1770 aa3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms