RNA–Protein interactions for RNA: YMR305C

SCW10, Transcript of Cell wall protein with similarity to glucanases, yeastyeast

Gene SCW10, Length 1,170 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCW10YMR305C MTC1P47018 478 aaKnown RBP12.38□□□□□ -0.43
SCW10YMR305C FAP1P53971 965 aa12.08□□□□□ -0.48
SCW10YMR305C PRY3P47033 881 aa11.4□□□□□ -0.58
SCW10YMR305C AAD16Q02895 342 aa10.93□□□□□ -0.66
SCW10YMR305C PRI1P10363 409 aa10.91□□□□□ -0.66
SCW10YMR305C YCK3P39962 524 aa10.82□□□□□ -0.68
SCW10YMR305C DRS1P32892 752 aaKnown RBP10.75□□□□□ -0.69
SCW10YMR305C HAA1Q12753 694 aaKnown RBP10.59□□□□□ -0.71
SCW10YMR305C ISW2Q08773 1120 aa10.4□□□□□ -0.74
SCW10YMR305C RPG1P38249 964 aaKnown RBP10.37□□□□□ -0.75
SCW10YMR305C TSR3Q12094 313 aaKnown RBP10.3□□□□□ -0.76
SCW10YMR305C MRPL32P25348 183 aa9.83□□□□□ -0.84
SCW10YMR305C DIP2Q12220 943 aaPredicted RBP9.72□□□□□ -0.85
SCW10YMR305C YGL015CP33199 130 aa9.64□□□□□ -0.87
SCW10YMR305C RSE1Q04693 1361 aaKnown RBP9.6□□□□□ -0.87
SCW10YMR305C RPL17AP05740 184 aaKnown RBP9.38□□□□□ -0.91
SCW10YMR305C REB1P21538 810 aa9.38□□□□□ -0.91
SCW10YMR305C RPL17BP46990 184 aaKnown RBP9.38□□□□□ -0.91
SCW10YMR305C CDC27P38042 758 aa9.27□□□□□ -0.93
SCW10YMR305C BUD31P25337 157 aaPredicted RBP9.23□□□□□ -0.93
SCW10YMR305C AVT3P36062 692 aa9.15□□□□□ -0.94
SCW10YMR305C SGS1P35187 1447 aa9.07□□□□□ -0.96
SCW10YMR305C MAP2P38174 421 aaKnown RBP9.06□□□□□ -0.96
SCW10YMR305C YKR023WP36119 530 aaKnown RBP9.04□□□□□ -0.96
SCW10YMR305C UBP10P53874 792 aaPredicted RBP9.02□□□□□ -0.97
SCW10YMR305C INO80P53115 1489 aa8.98□□□□□ -0.97
SCW10YMR305C SPT21P35209 758 aa8.93□□□□□ -0.98
SCW10YMR305C DCD1P06773 312 aa8.88□□□□□ -0.99
SCW10YMR305C HOP09932 586 aa8.86□□□□□ -0.99
SCW10YMR305C TCB3Q03640 1545 aaKnown RBP8.84□□□□□ -0.99
SCW10YMR305C TFC8Q12308 588 aa8.83□□□□□ -1
SCW10YMR305C SPA2P23201 1466 aaKnown RBP8.73□□□□□ -1.01
SCW10YMR305C BFR2Q06631 534 aaKnown RBP8.73□□□□□ -1.01
SCW10YMR305C TY1B-DR4Q07793 1604 aa8.72□□□□□ -1.01
SCW10YMR305C SCY1P53009 804 aa8.72□□□□□ -1.01
SCW10YMR305C MON2P48563 1636 aaPredicted RBP8.69□□□□□ -1.02
SCW10YMR305C SIS1P25294 352 aaKnown RBP8.69□□□□□ -1.02
SCW10YMR305C SSN2P38931 1420 aa8.66□□□□□ -1.02
SCW10YMR305C TIF4632P39936 914 aaKnown RBP8.64□□□□□ -1.03
SCW10YMR305C TGL3P40308 642 aa8.64□□□□□ -1.03
SCW10YMR305C TFA1P36100 482 aa8.63□□□□□ -1.03
SCW10YMR305C SLX5P32828 619 aaKnown RBP8.62□□□□□ -1.03
SCW10YMR305C UBP9P39967 754 aa8.59□□□□□ -1.03
SCW10YMR305C HSL1P34244 1518 aa8.54□□□□□ -1.04
SCW10YMR305C BCH2P36122 765 aa8.52□□□□□ -1.05
SCW10YMR305C SWR1Q05471 1514 aa8.5□□□□□ -1.05
SCW10YMR305C SPT6P23615 1451 aaKnown RBP8.5□□□□□ -1.05
SCW10YMR305C RIM101P33400 625 aa8.43□□□□□ -1.06
SCW10YMR305C HIR3P47171 1648 aa8.37□□□□□ -1.07
SCW10YMR305C XRN1P22147 1528 aaKnown RBP8.29□□□□□ -1.08
SCW10YMR305C KOG1P38873 1557 aa8.24□□□□□ -1.09
SCW10YMR305C DNA2P38859 1522 aa8.24□□□□□ -1.09
SCW10YMR305C BDF1P35817 686 aa8.23□□□□□ -1.09
SCW10YMR305C EPS1P40557 701 aa8.23□□□□□ -1.09
SCW10YMR305C YBL029C-AQ3E756 94 aa8.23□□□□□ -1.09
SCW10YMR305C RQC2Q12532 1038 aaKnown RBP8.21□□□□□ -1.1
SCW10YMR305C SIN3P22579 1536 aa8.2□□□□□ -1.1
SCW10YMR305C MST1P07236 462 aa8.2□□□□□ -1.1
SCW10YMR305C REV3P14284 1504 aa8.19□□□□□ -1.1
SCW10YMR305C THO2P53552 1597 aaKnown RBP8.15□□□□□ -1.1
SCW10YMR305C OXP1P28273 1286 aa8.15□□□□□ -1.1
SCW10YMR305C SSK2P53599 1579 aa8.12□□□□□ -1.11
SCW10YMR305C YOR238WQ08634 303 aa8.11□□□□□ -1.11
SCW10YMR305C BUD4P47136 1447 aa8.1□□□□□ -1.11
SCW10YMR305C VNX1P42839 908 aa8.09□□□□□ -1.11
SCW10YMR305C ECM5Q03214 1411 aa8.03□□□□□ -1.12
SCW10YMR305C ESP1Q03018 1630 aa8.03□□□□□ -1.12
SCW10YMR305C ATG2P53855 1592 aa8.02□□□□□ -1.13
SCW10YMR305C MYO2P19524 1574 aaKnown RBP8.01□□□□□ -1.13
SCW10YMR305C PTP3P40048 928 aa8□□□□□ -1.13
SCW10YMR305C TAF2P23255 1407 aa7.99□□□□□ -1.13
SCW10YMR305C NSR1P27476 414 aaKnown RBP RIP-Chip data7.99□□□□□ -1.13not detected
SCW10YMR305C SPP1Q03012 353 aa7.99□□□□□ -1.13
SCW10YMR305C PEP1P32319 1579 aa7.97□□□□□ -1.13
SCW10YMR305C WSC3Q12215 556 aa7.97□□□□□ -1.13
SCW10YMR305C YIL055CP40523 627 aaKnown RBP7.96□□□□□ -1.14
SCW10YMR305C YAP5P40574 245 aa7.94□□□□□ -1.14
SCW10YMR305C MDS3P53094 1487 aa7.94□□□□□ -1.14
SCW10YMR305C YPK9Q12697 1472 aa7.94□□□□□ -1.14
SCW10YMR305C AIR2Q12476 344 aaKnown RBP7.93□□□□□ -1.14
SCW10YMR305C SKI3P17883 1432 aaKnown RBP7.9□□□□□ -1.14
SCW10YMR305C POL1P13382 1468 aa7.89□□□□□ -1.15
SCW10YMR305C BBC1P47068 1157 aa7.88□□□□□ -1.15
SCW10YMR305C AI2P03876 854 aa7.87□□□□□ -1.15
SCW10YMR305C FKH1P40466 484 aa7.87□□□□□ -1.15
SCW10YMR305C RSM7P47150 247 aa7.87□□□□□ -1.15
SCW10YMR305C CHD1P32657 1468 aa7.87□□□□□ -1.15
SCW10YMR305C TIF11P38912 153 aaKnown RBP7.86□□□□□ -1.15
SCW10YMR305C SCC2Q04002 1493 aa7.85□□□□□ -1.15
SCW10YMR305C YJL171CP46992 396 aa7.84□□□□□ -1.15
SCW10YMR305C RPO31P04051 1460 aa7.83□□□□□ -1.16
SCW10YMR305C STU1P38198 1513 aa7.81□□□□□ -1.16
SCW10YMR305C YTA7P40340 1379 aa7.79□□□□□ -1.16
SCW10YMR305C GTT3P39996 337 aa7.78□□□□□ -1.16
SCW10YMR305C YAH1Q12184 172 aaKnown RBP7.78□□□□□ -1.16
SCW10YMR305C RKR1Q04781 1562 aa7.78□□□□□ -1.16
SCW10YMR305C YOR1P53049 1477 aa7.77□□□□□ -1.17
SCW10YMR305C TOP2P06786 1428 aaKnown RBP7.77□□□□□ -1.17
SCW10YMR305C MMS22Q06164 1454 aa7.76□□□□□ -1.17
SCW10YMR305C LDB19Q12502 818 aa7.76□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms