RNA–Protein interactions for RNA: YML043C

RRN11, Transcript of Component of the core factor (CF) rDNA transcription factor complex, yeastyeast

Gene RRN11, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRN11YML043C FAP1P53971 965 aa11.81□□□□□ -0.52
RRN11YML043C MTC1P47018 478 aaKnown RBP11.55□□□□□ -0.56
RRN11YML043C PRY3P47033 881 aa11.19□□□□□ -0.62
RRN11YML043C YCK3P39962 524 aa10.71□□□□□ -0.69
RRN11YML043C AAD16Q02895 342 aa10.56□□□□□ -0.72
RRN11YML043C PRI1P10363 409 aa10.49□□□□□ -0.73
RRN11YML043C HAA1Q12753 694 aaKnown RBP10.41□□□□□ -0.74
RRN11YML043C DRS1P32892 752 aaKnown RBP10□□□□□ -0.81
RRN11YML043C TSR3Q12094 313 aaKnown RBP9.83□□□□□ -0.84
RRN11YML043C ISW2Q08773 1120 aa9.78□□□□□ -0.84
RRN11YML043C RPG1P38249 964 aaKnown RBP9.77□□□□□ -0.85
RRN11YML043C BUD31P25337 157 aaPredicted RBP9.46□□□□□ -0.9
RRN11YML043C MRPL32P25348 183 aa9.38□□□□□ -0.91
RRN11YML043C YGL015CP33199 130 aa9.37□□□□□ -0.91
RRN11YML043C DIP2Q12220 943 aaPredicted RBP8.94□□□□□ -0.98
RRN11YML043C CDC27P38042 758 aa8.8□□□□□ -1
RRN11YML043C RSE1Q04693 1361 aaKnown RBP8.79□□□□□ -1
RRN11YML043C UBP10P53874 792 aaPredicted RBP8.66□□□□□ -1.02
RRN11YML043C REB1P21538 810 aa8.65□□□□□ -1.02
RRN11YML043C SIS1P25294 352 aaKnown RBP8.64□□□□□ -1.03
RRN11YML043C MAP2P38174 421 aaKnown RBP8.64□□□□□ -1.03
RRN11YML043C RPL17AP05740 184 aaKnown RBP8.63□□□□□ -1.03
RRN11YML043C RPL17BP46990 184 aaKnown RBP8.63□□□□□ -1.03
RRN11YML043C AVT3P36062 692 aa8.52□□□□□ -1.05
RRN11YML043C YKR023WP36119 530 aaKnown RBP8.44□□□□□ -1.06
RRN11YML043C UBP9P39967 754 aa8.36□□□□□ -1.07
RRN11YML043C TGL3P40308 642 aa8.27□□□□□ -1.09
RRN11YML043C DCD1P06773 312 aa8.25□□□□□ -1.09
RRN11YML043C SPT21P35209 758 aa8.24□□□□□ -1.09
RRN11YML043C TIF4632P39936 914 aaKnown RBP8.24□□□□□ -1.09
RRN11YML043C TFC8Q12308 588 aa8.24□□□□□ -1.09
RRN11YML043C HOP09932 586 aa8.22□□□□□ -1.09
RRN11YML043C SCY1P53009 804 aa8.19□□□□□ -1.1
RRN11YML043C SLX5P32828 619 aaKnown RBP8.15□□□□□ -1.1
RRN11YML043C BFR2Q06631 534 aaKnown RBP8.11□□□□□ -1.11
RRN11YML043C BCH2P36122 765 aa7.91□□□□□ -1.14
RRN11YML043C YBL029C-AQ3E756 94 aa7.88□□□□□ -1.15
RRN11YML043C TFA1P36100 482 aa7.86□□□□□ -1.15
RRN11YML043C MST1P07236 462 aa7.83□□□□□ -1.16
RRN11YML043C RIM101P33400 625 aa7.77□□□□□ -1.17
RRN11YML043C VNX1P42839 908 aa7.74□□□□□ -1.17
RRN11YML043C RGA2Q06407 1009 aa7.7□□□□□ -1.18
RRN11YML043C AIR2Q12476 344 aaKnown RBP7.68□□□□□ -1.18
RRN11YML043C YOR238WQ08634 303 aa7.66□□□□□ -1.18
RRN11YML043C FKH1P40466 484 aa7.62□□□□□ -1.19
RRN11YML043C BDF1P35817 686 aa7.62□□□□□ -1.19
RRN11YML043C EPS1P40557 701 aa7.61□□□□□ -1.19
RRN11YML043C SPP1Q03012 353 aa7.6□□□□□ -1.19
RRN11YML043C NSR1P27476 414 aaKnown RBP RIP-Chip data7.56□□□□□ -1.2not detected
RRN11YML043C YJL171CP46992 396 aa7.55□□□□□ -1.2
RRN11YML043C WSC3Q12215 556 aa7.52□□□□□ -1.21
RRN11YML043C OXP1P28273 1286 aa7.48□□□□□ -1.21
RRN11YML043C TIF11P38912 153 aaKnown RBP7.47□□□□□ -1.21
RRN11YML043C YAP5P40574 245 aa7.42□□□□□ -1.22
RRN11YML043C BMT6Q12291 365 aa7.39□□□□□ -1.23
RRN11YML043C LDB19Q12502 818 aa7.37□□□□□ -1.23
RRN11YML043C PTP3P40048 928 aa7.35□□□□□ -1.23
RRN11YML043C YIL055CP40523 627 aaKnown RBP7.34□□□□□ -1.23
RRN11YML043C IOC2Q12072 812 aa7.34□□□□□ -1.23
RRN11YML043C ULI1P43604 169 aa7.29□□□□□ -1.24
RRN11YML043C GTT3P39996 337 aa7.26□□□□□ -1.25
RRN11YML043C BBC1P47068 1157 aa7.26□□□□□ -1.25
RRN11YML043C RSM7P47150 247 aa7.26□□□□□ -1.25
RRN11YML043C AI2P03876 854 aa7.22□□□□□ -1.25
RRN11YML043C RQC2Q12532 1038 aaKnown RBP7.2□□□□□ -1.26
RRN11YML043C YAH1Q12184 172 aaKnown RBP7.15□□□□□ -1.27
RRN11YML043C RTG1P32607 177 aa7.11□□□□□ -1.27
RRN11YML043C PIB1Q06651 286 aa7.09□□□□□ -1.27
RRN11YML043C MSB4Q12317 492 aa7.09□□□□□ -1.27
RRN11YML043C YLR271WQ06152 274 aa7.06□□□□□ -1.28
RRN11YML043C NCR1Q12200 1170 aa7.06□□□□□ -1.28
RRN11YML043C EAP1P36041 632 aaKnown RBP7.04□□□□□ -1.28
RRN11YML043C TRP5P00931 707 aaKnown RBP7.03□□□□□ -1.28
RRN11YML043C PSD2P53037 1138 aaKnown RBP7.02□□□□□ -1.29
RRN11YML043C BCK2P33306 851 aa7.01□□□□□ -1.29
RRN11YML043C YOL036WQ08206 761 aa7.01□□□□□ -1.29
RRN11YML043C SEC61P32915 480 aa6.99□□□□□ -1.29
RRN11YML043C YNL035CP53962 389 aaKnown RBP6.99□□□□□ -1.29
RRN11YML043C SET4P42948 560 aa6.97□□□□□ -1.29
RRN11YML043C MRM1P25270 412 aa6.92□□□□□ -1.3
RRN11YML043C SAP30P38429 201 aa6.88□□□□□ -1.31
RRN11YML043C CHL1P22516 861 aaPredicted RBP6.87□□□□□ -1.31
RRN11YML043C SSP1P38871 571 aa6.86□□□□□ -1.31
RRN11YML043C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.86□□□□□ -1.31not detected
RRN11YML043C DAN4P47179 1161 aa6.83□□□□□ -1.32
RRN11YML043C PRE3P38624 215 aa6.82□□□□□ -1.32
RRN11YML043C YMR1P47147 688 aaKnown RBP RIP-Chip data6.82□□□□□ -1.32not detected
RRN11YML043C VPS29P38759 282 aa6.81□□□□□ -1.32
RRN11YML043C TFG1P41895 735 aaPredicted RBP6.8□□□□□ -1.32
RRN11YML043C YDL129WQ07555 291 aa6.8□□□□□ -1.32
RRN11YML043C DBP1P24784 617 aaKnown RBP6.79□□□□□ -1.32
RRN11YML043C SAM3Q08986 587 aa6.79□□□□□ -1.32
RRN11YML043C CST9Q06032 482 aa6.78□□□□□ -1.32
RRN11YML043C RTG3P38165 486 aa6.77□□□□□ -1.33
RRN11YML043C XDJ1P39102 459 aa6.77□□□□□ -1.33
RRN11YML043C VMA1P17255 1071 aaKnown RBP6.76□□□□□ -1.33
RRN11YML043C RGA1P39083 1007 aa6.76□□□□□ -1.33
RRN11YML043C MGA2P40578 1113 aa6.76□□□□□ -1.33
RRN11YML043C STS1P38637 319 aa6.75□□□□□ -1.33
RRN11YML043C YFR006WP43590 535 aa6.74□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 6.7 ms