RNA–Protein interactions for RNA: YJR024C

MDE1, Transcript of 5'-methylthioribulose-1-phosphate dehydratase, yeastyeast

Gene MDE1, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDE1YJR024C DRS1P32892 752 aaKnown RBP12.87□□□□□ -0.35
MDE1YJR024C MTC1P47018 478 aaKnown RBP12.82□□□□□ -0.36
MDE1YJR024C SGS1P35187 1447 aa11.6□□□□□ -0.55
MDE1YJR024C INO80P53115 1489 aa11.44□□□□□ -0.58
MDE1YJR024C TCB3Q03640 1545 aaKnown RBP11.36□□□□□ -0.59
MDE1YJR024C MON2P48563 1636 aaPredicted RBP11.34□□□□□ -0.59
MDE1YJR024C TY1B-DR4Q07793 1604 aa11.29□□□□□ -0.6
MDE1YJR024C BFR2Q06631 534 aaKnown RBP11.11□□□□□ -0.63
MDE1YJR024C SPA2P23201 1466 aaKnown RBP11.06□□□□□ -0.64
MDE1YJR024C SWR1Q05471 1514 aa11.05□□□□□ -0.64
MDE1YJR024C SSN2P38931 1420 aa11.02□□□□□ -0.64
MDE1YJR024C HSL1P34244 1518 aa11.02□□□□□ -0.65
MDE1YJR024C SPT6P23615 1451 aaKnown RBP10.97□□□□□ -0.65
MDE1YJR024C DIP2Q12220 943 aaPredicted RBP10.96□□□□□ -0.65
MDE1YJR024C HIR3P47171 1648 aa10.82□□□□□ -0.68
MDE1YJR024C AVT3P36062 692 aa10.81□□□□□ -0.68
MDE1YJR024C DNA2P38859 1522 aa10.75□□□□□ -0.69
MDE1YJR024C KOG1P38873 1557 aa10.74□□□□□ -0.69
MDE1YJR024C XRN1P22147 1528 aaKnown RBP10.7□□□□□ -0.7
MDE1YJR024C REV3P14284 1504 aa10.58□□□□□ -0.72
MDE1YJR024C FAP1P53971 965 aa10.54□□□□□ -0.72
MDE1YJR024C THO2P53552 1597 aaKnown RBP10.52□□□□□ -0.72
MDE1YJR024C SIN3P22579 1536 aa10.5□□□□□ -0.73
MDE1YJR024C BUD4P47136 1447 aa10.45□□□□□ -0.74
MDE1YJR024C SSK2P53599 1579 aa10.44□□□□□ -0.74
MDE1YJR024C TFA1P36100 482 aa10.43□□□□□ -0.74
MDE1YJR024C ISW2Q08773 1120 aa10.41□□□□□ -0.74
MDE1YJR024C ECM5Q03214 1411 aa10.41□□□□□ -0.74
MDE1YJR024C ESP1Q03018 1630 aa10.4□□□□□ -0.74
MDE1YJR024C TAF2P23255 1407 aa10.4□□□□□ -0.75
MDE1YJR024C ATG2P53855 1592 aa10.39□□□□□ -0.75
MDE1YJR024C MYO2P19524 1574 aaKnown RBP10.34□□□□□ -0.75
MDE1YJR024C RSE1Q04693 1361 aaKnown RBP10.33□□□□□ -0.76
MDE1YJR024C PRI1P10363 409 aa10.31□□□□□ -0.76
MDE1YJR024C RPG1P38249 964 aaKnown RBP10.31□□□□□ -0.76
MDE1YJR024C MDS3P53094 1487 aa10.3□□□□□ -0.76
MDE1YJR024C PEP1P32319 1579 aa10.29□□□□□ -0.76
MDE1YJR024C SKI3P17883 1432 aaKnown RBP10.26□□□□□ -0.77
MDE1YJR024C YPK9Q12697 1472 aa10.17□□□□□ -0.78
MDE1YJR024C AAD16Q02895 342 aa10.13□□□□□ -0.79
MDE1YJR024C SCC2Q04002 1493 aa10.1□□□□□ -0.79
MDE1YJR024C POL1P13382 1468 aa10.07□□□□□ -0.8
MDE1YJR024C TY2B-LR1P0C2J3 1770 aa10.06□□□□□ -0.8
MDE1YJR024C TY2B-FP0CX63 1770 aa10.06□□□□□ -0.8
MDE1YJR024C TY2B-GR2P0CX64 1770 aa10.06□□□□□ -0.8
MDE1YJR024C TY2B-CP25384 1770 aa10.06□□□□□ -0.8
MDE1YJR024C TY2B-DR2Q03494 1770 aa10.06□□□□□ -0.8
MDE1YJR024C TY1B-DR1Q03855 1755 aa10.06□□□□□ -0.8
MDE1YJR024C TY2B-DR3Q07791 1770 aaKnown RBP10.06□□□□□ -0.8
MDE1YJR024C TY2B-OR1Q12113 1770 aa10.06□□□□□ -0.8
MDE1YJR024C TY2B-DR1Q12472 1770 aa10.06□□□□□ -0.8
MDE1YJR024C TY2B-OR2Q12501 1770 aa10.06□□□□□ -0.8
MDE1YJR024C RKR1Q04781 1562 aa10.05□□□□□ -0.8
MDE1YJR024C STU1P38198 1513 aa10.02□□□□□ -0.8
MDE1YJR024C RPO31P04051 1460 aa10.02□□□□□ -0.81
MDE1YJR024C UFD4P33202 1483 aa10.02□□□□□ -0.81
MDE1YJR024C BPT1P14772 1559 aa10.01□□□□□ -0.81
MDE1YJR024C TY1B-DR3Q99231 1755 aa9.99□□□□□ -0.81
MDE1YJR024C RPL17AP05740 184 aaKnown RBP9.98□□□□□ -0.81
MDE1YJR024C RPL17BP46990 184 aaKnown RBP9.98□□□□□ -0.81
MDE1YJR024C TY2B-BQ12491 1770 aa9.97□□□□□ -0.81
MDE1YJR024C YCF1P39109 1515 aaKnown RBP9.96□□□□□ -0.82
MDE1YJR024C YOR1P53049 1477 aa9.95□□□□□ -0.82
MDE1YJR024C TOP2P06786 1428 aaKnown RBP9.94□□□□□ -0.82
MDE1YJR024C TY1B-BRQ12193 1756 aa9.92□□□□□ -0.82
MDE1YJR024C TY1B-GR3Q12316 1755 aa9.92□□□□□ -0.82
MDE1YJR024C TY1B-ORQ92393 1755 aa9.92□□□□□ -0.82
MDE1YJR024C TY1B-HO13535 1793 aa9.9□□□□□ -0.82
MDE1YJR024C TY1B-DR5P0C2I2 1755 aa9.9□□□□□ -0.82
MDE1YJR024C TY1B-DR6P0C2I3 1755 aa9.9□□□□□ -0.82
MDE1YJR024C TY1B-LR2P0C2I5 1755 aa9.9□□□□□ -0.82
MDE1YJR024C TY1B-LR3P0C2I6 1755 aaKnown RBP9.9□□□□□ -0.82
MDE1YJR024C TY1B-PR1P0C2I9 1755 aaKnown RBP9.9□□□□□ -0.82
MDE1YJR024C TY1B-PR2P0C2J0 1756 aa9.9□□□□□ -0.82
MDE1YJR024C TY1B-PR3P0C2J1 1755 aaKnown RBP9.9□□□□□ -0.82
MDE1YJR024C TY1B-JR1P47098 1755 aa9.9□□□□□ -0.82
MDE1YJR024C TY1B-ML2Q03434 1755 aaKnown RBP9.9□□□□□ -0.82
MDE1YJR024C TY1B-ER1Q03612 1755 aa9.9□□□□□ -0.82
MDE1YJR024C TY1B-ML1Q04711 1755 aaKnown RBP9.9□□□□□ -0.82
MDE1YJR024C TY1B-GR2Q12269 1755 aa9.9□□□□□ -0.82
MDE1YJR024C TY1B-OLQ12273 1755 aa9.9□□□□□ -0.82
MDE1YJR024C TY1B-PLQ12414 1755 aaKnown RBP9.9□□□□□ -0.82
MDE1YJR024C YTA7P40340 1379 aa9.89□□□□□ -0.83
MDE1YJR024C CHD1P32657 1468 aa9.89□□□□□ -0.83
MDE1YJR024C SMC4Q12267 1418 aa9.88□□□□□ -0.83
MDE1YJR024C PRY3P47033 881 aa9.87□□□□□ -0.83
MDE1YJR024C MMS22Q06164 1454 aa9.85□□□□□ -0.83
MDE1YJR024C MYO4P32492 1471 aa9.85□□□□□ -0.83
MDE1YJR024C CDC25P04821 1589 aa9.83□□□□□ -0.84
MDE1YJR024C ESC1Q03661 1658 aaKnown RBP9.83□□□□□ -0.84
MDE1YJR024C REB1P21538 810 aa9.82□□□□□ -0.84
MDE1YJR024C TSR3Q12094 313 aaKnown RBP9.82□□□□□ -0.84
MDE1YJR024C RQC2Q12532 1038 aaKnown RBP9.78□□□□□ -0.84
MDE1YJR024C MLP2P40457 1679 aa9.77□□□□□ -0.84
MDE1YJR024C TY1B-JR2P47100 1755 aaKnown RBP9.73□□□□□ -0.85
MDE1YJR024C TY1B-ER2Q03619 1755 aa9.73□□□□□ -0.85
MDE1YJR024C TY1B-MR1Q04214 1755 aa9.73□□□□□ -0.85
MDE1YJR024C TY1B-MR2Q04670 1755 aaKnown RBP9.73□□□□□ -0.85
MDE1YJR024C TY1B-LR1Q12088 1755 aaKnown RBP9.73□□□□□ -0.85
MDE1YJR024C TY1B-NL1Q12112 1755 aa9.73□□□□□ -0.85
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms