Protein–RNA interactions for Protein: Q04670
TY1B-MR2, Transposon Ty1-MR2 Gag-Pol polyprotein, yeast
Protein |
RNA |
Prediction (catRAPID) |
Interaction (RIP-Chip) |
Gene |
UniProt Accession |
Gene |
Ensembl Transcript ID |
Length |
Transcript Status |
Prediction Score |
Prediction z-Score |
Detected Interaction |
TY1B-MR2 | Q04670 | YML009W-B | YML009W-B | 477 nt | | 32,47 | ■■■□□ 2,79 | |
TY1B-MR2 | Q04670 | NOP1 | YDL014W | 984 nt | | 31,1 | ■■■□□ 2,57 | |
TY1B-MR2 | Q04670 | NSR1 | YGR159C | 1245 nt | | 30,89 | ■■■□□ 2,54 | |
TY1B-MR2 | Q04670 | YKL036C | YKL036C | 393 nt | | 29,87 | ■■■□□ 2,37 | |
TY1B-MR2 | Q04670 | YJL027C | YJL027C | 417 nt | | 28,01 | ■■■□□ 2,07 | |
TY1B-MR2 | Q04670 | SCS3 | YGL126W | 1143 nt | | 27,87 | ■■■□□ 2,05 | |
TY1B-MR2 | Q04670 | Q0297 | Q0297 | 156 nt | | 27,78 | ■■■□□ 2,04 | |
TY1B-MR2 | Q04670 | SRX1 | YKL086W | 384 nt | | 27,68 | ■■■□□ 2,02 | |
TY1B-MR2 | Q04670 | MDJ1 | YFL016C | 1536 nt | | 27,4 | ■■□□□ 1,98 | |
TY1B-MR2 | Q04670 | YCR051W | YCR051W | 669 nt | | 26,38 | ■■□□□ 1,81 | |
TY1B-MR2 | Q04670 | YOL085C | YOL085C | 342 nt | | 25,69 | ■■□□□ 1,7 | |
TY1B-MR2 | Q04670 | PKP1 | YIL042C | 1185 nt | | 25,66 | ■■□□□ 1,7 | |
TY1B-MR2 | Q04670 | SCJ1 | YMR214W | 1134 nt | | 25,11 | ■■□□□ 1,61 | |
TY1B-MR2 | Q04670 | RPP1B | YDL130W | 321 nt | | 24,89 | ■■□□□ 1,57 | |
TY1B-MR2 | Q04670 | ATS1 | YAL020C | 1002 nt | | 24,8 | ■■□□□ 1,56 | |
TY1B-MR2 | Q04670 | TRN1 | tP(UGG)A | 72 nt | | 24,67 | ■■□□□ 1,54 | |
TY1B-MR2 | Q04670 | SUF9 | tP(UGG)F | 72 nt | | 24,67 | ■■□□□ 1,54 | |
TY1B-MR2 | Q04670 | SUF8 | tP(UGG)H | 72 nt | | 24,67 | ■■□□□ 1,54 | |
TY1B-MR2 | Q04670 | tP(UGG)L | tP(UGG)L | 72 nt | | 24,67 | ■■□□□ 1,54 | |
TY1B-MR2 | Q04670 | SUF7 | tP(UGG)M | 72 nt | | 24,67 | ■■□□□ 1,54 | |
TY1B-MR2 | Q04670 | tP(UGG)N1 | tP(UGG)N1 | 72 nt | | 24,67 | ■■□□□ 1,54 | |
TY1B-MR2 | Q04670 | tP(UGG)N2 | tP(UGG)N2 | 72 nt | | 24,67 | ■■□□□ 1,54 | |
TY1B-MR2 | Q04670 | tP(UGG)O1 | tP(UGG)O1 | 72 nt | | 24,67 | ■■□□□ 1,54 | |
TY1B-MR2 | Q04670 | SUF11 | tP(UGG)O2 | 72 nt | | 24,67 | ■■□□□ 1,54 | |
TY1B-MR2 | Q04670 | DBP2 | YNL112W | 1641 nt | | 24,43 | ■■□□□ 1,5 | |
TY1B-MR2 | Q04670 | CCC1 | YLR220W | 969 nt | | 24,36 | ■■□□□ 1,49 | |
TY1B-MR2 | Q04670 | PET122 | YER153C | 765 nt | | 24,03 | ■■□□□ 1,44 | |
TY1B-MR2 | Q04670 | SCR1 | SCR1 | 522 nt | | 23,67 | ■■□□□ 1,38 | |
TY1B-MR2 | Q04670 | tP(UGG)O3 | tP(UGG)O3 | 72 nt | | 23,45 | ■■□□□ 1,34 | |
TY1B-MR2 | Q04670 | RTC3 | YHR087W | 336 nt | | 23,25 | ■■□□□ 1,31 | |
TY1B-MR2 | Q04670 | RRN5 | YLR141W | 1092 nt | | 23,18 | ■■□□□ 1,3 | |
TY1B-MR2 | Q04670 | RSB1 | YOR049C | 1065 nt | | 23,15 | ■■□□□ 1,3 | |
TY1B-MR2 | Q04670 | RVS167 | YDR388W | 1449 nt | | 22,82 | ■■□□□ 1,24 | |
TY1B-MR2 | Q04670 | PST2 | YDR032C | 597 nt | | 22,8 | ■■□□□ 1,24 | |
TY1B-MR2 | Q04670 | YER088W-B | YER088W-B | 147 nt | | 22,76 | ■■□□□ 1,23 | |
TY1B-MR2 | Q04670 | YBR190W | YBR190W | 312 nt | | 22,61 | ■■□□□ 1,21 | |
TY1B-MR2 | Q04670 | YKL097C | YKL097C | 411 nt | | 22,51 | ■■□□□ 1,19 | |
TY1B-MR2 | Q04670 | YDJ1 | YNL064C | 1230 nt | | 22,43 | ■■□□□ 1,18 | |
TY1B-MR2 | Q04670 | SHR5 | YOL110W | 714 nt | | 22,32 | ■■□□□ 1,16 | |
TY1B-MR2 | Q04670 | GAR1 | YHR089C | 618 nt | | 22,09 | ■■□□□ 1,13 | |
TY1B-MR2 | Q04670 | SHU1 | YHL006C | 453 nt | | 21,99 | ■■□□□ 1,11 | |
TY1B-MR2 | Q04670 | DEP1 | YAL013W | 1218 nt | | 21,79 | ■■□□□ 1,08 | |
TY1B-MR2 | Q04670 | YOR139C | YOR139C | 393 nt | | 21,66 | ■■□□□ 1,06 | |
TY1B-MR2 | Q04670 | YAL037C-B | YAL037C-B | 975 nt | | 21,64 | ■■□□□ 1,05 | |
TY1B-MR2 | Q04670 | URN1 | YPR152C | 1398 nt | | 21,41 | ■■□□□ 1,02 | |
TY1B-MR2 | Q04670 | TIR1 | YER011W | 765 nt | | 21,23 | ■□□□□ 0,99 | |
TY1B-MR2 | Q04670 | SRB2 | YHR041C | 633 nt | | 21,12 | ■□□□□ 0,97 | |
TY1B-MR2 | Q04670 | NPL3 | YDR432W | 1245 nt | | 21,11 | ■□□□□ 0,97 | |
TY1B-MR2 | Q04670 | MNP1 | YGL068W | 585 nt | | 21,06 | ■□□□□ 0,96 | |
TY1B-MR2 | Q04670 | YNL208W | YNL208W | 600 nt | | 21,01 | ■□□□□ 0,95 | |
TY1B-MR2 | Q04670 | SSA1 | YAL005C | 1929 nt | | 20,93 | ■□□□□ 0,94 | |
TY1B-MR2 | Q04670 | RPN10 | YHR200W | 807 nt | | 20,88 | ■□□□□ 0,93 | |
TY1B-MR2 | Q04670 | WWM1 | YFL010C | 636 nt | | 20,71 | ■□□□□ 0,91 | |
TY1B-MR2 | Q04670 | OPI9 | YLR338W | 858 nt | | 20,68 | ■□□□□ 0,9 | |
TY1B-MR2 | Q04670 | HOM6 | YJR139C | 1080 nt | | 20,64 | ■□□□□ 0,89 | |
TY1B-MR2 | Q04670 | SAH1 | YER043C | 1350 nt | | 20,61 | ■□□□□ 0,89 | |
TY1B-MR2 | Q04670 | YJR120W | YJR120W | 351 nt | | 20,57 | ■□□□□ 0,88 | |
TY1B-MR2 | Q04670 | YOL037C | YOL037C | 354 nt | | 20,57 | ■□□□□ 0,88 | |
TY1B-MR2 | Q04670 | YGR021W | YGR021W | 873 nt | | 20,47 | ■□□□□ 0,87 | |
TY1B-MR2 | Q04670 | tM(CAU)C | tM(CAU)C | 72 nt | | 20,39 | ■□□□□ 0,86 | |
TY1B-MR2 | Q04670 | IMT4 | tM(CAU)E | 72 nt | | 20,39 | ■□□□□ 0,86 | |
TY1B-MR2 | Q04670 | IMT3 | tM(CAU)J3 | 72 nt | | 20,39 | ■□□□□ 0,86 | |
TY1B-MR2 | Q04670 | IMT1 | tM(CAU)O1 | 72 nt | | 20,39 | ■□□□□ 0,86 | |
TY1B-MR2 | Q04670 | IMT2 | tM(CAU)P | 72 nt | | 20,39 | ■□□□□ 0,86 | |
TY1B-MR2 | Q04670 | YJR018W | YJR018W | 363 nt | | 20,32 | ■□□□□ 0,84 | |
TY1B-MR2 | Q04670 | RKM5 | YLR137W | 1104 nt | | 20,25 | ■□□□□ 0,83 | |
TY1B-MR2 | Q04670 | ARE1 | YCR048W | 1833 nt | | 20,15 | ■□□□□ 0,82 | |
TY1B-MR2 | Q04670 | PUS2 | YGL063W | 1113 nt | | 20,13 | ■□□□□ 0,81 | |
TY1B-MR2 | Q04670 | MOT3 | YMR070W | 1473 nt | | 20,12 | ■□□□□ 0,81 | |
TY1B-MR2 | Q04670 | YHR049C-A | YHR049C-A | 297 nt | | 20,11 | ■□□□□ 0,81 | |
TY1B-MR2 | Q04670 | SSA3 | YBL075C | 1950 nt | | 20,11 | ■□□□□ 0,81 | |
TY1B-MR2 | Q04670 | PUT4 | YOR348C | 1884 nt | | 20,1 | ■□□□□ 0,81 | |
TY1B-MR2 | Q04670 | YFL021C-A | YFL021C-A | 855 nt | | 20,07 | ■□□□□ 0,8 | |
TY1B-MR2 | Q04670 | PUN1 | YLR414C | 792 nt | | 20,01 | ■□□□□ 0,79 | |
TY1B-MR2 | Q04670 | YLR281C | YLR281C | 468 nt | | 19,95 | ■□□□□ 0,78 | |
TY1B-MR2 | Q04670 | RPP2B | YDR382W | 333 nt | | 19,94 | ■□□□□ 0,78 | |
TY1B-MR2 | Q04670 | WHI5 | YOR083W | 888 nt | | 19,87 | ■□□□□ 0,77 | |
TY1B-MR2 | Q04670 | BDH2 | YAL061W | 1254 nt | | 19,85 | ■□□□□ 0,77 | |
TY1B-MR2 | Q04670 | BSC6 | YOL137W | 1494 nt | | 19,83 | ■□□□□ 0,76 | |
TY1B-MR2 | Q04670 | YLR236C | YLR236C | 324 nt | | 19,83 | ■□□□□ 0,76 | |
TY1B-MR2 | Q04670 | FMP45 | YDL222C | 930 nt | | 19,77 | ■□□□□ 0,76 | |
TY1B-MR2 | Q04670 | YPR011C | YPR011C | 981 nt | | 19,73 | ■□□□□ 0,75 | |
TY1B-MR2 | Q04670 | PTC2 | YER089C | 1395 nt | | 19,72 | ■□□□□ 0,75 | |
TY1B-MR2 | Q04670 | POA1 | YBR022W | 534 nt | | 19,62 | ■□□□□ 0,73 | |
TY1B-MR2 | Q04670 | BUD23 | YCR047C | 828 nt | | 19,6 | ■□□□□ 0,73 | |
TY1B-MR2 | Q04670 | DSK2 | YMR276W | 1122 nt | | 19,53 | ■□□□□ 0,72 | |
TY1B-MR2 | Q04670 | FIS1 | YIL065C | 468 nt | | 19,52 | ■□□□□ 0,72 | |
TY1B-MR2 | Q04670 | YBL100C | YBL100C | 315 nt | | 19,52 | ■□□□□ 0,71 | |
TY1B-MR2 | Q04670 | LPX1 | YOR084W | 1164 nt | | 19,39 | ■□□□□ 0,7 | |
TY1B-MR2 | Q04670 | YLR154C-G | YLR154C-G | 150 nt | | 19,37 | ■□□□□ 0,69 | |
TY1B-MR2 | Q04670 | LSM3 | YLR438C-A | 270 nt | | 19,35 | ■□□□□ 0,69 | |
TY1B-MR2 | Q04670 | PHO4 | YFR034C | 939 nt | | 19,33 | ■□□□□ 0,68 | |
TY1B-MR2 | Q04670 | YCH1 | YGR203W | 447 nt | | 19,32 | ■□□□□ 0,68 | |
TY1B-MR2 | Q04670 | FPR4 | YLR449W | 1179 nt | | 19,31 | ■□□□□ 0,68 | |
TY1B-MR2 | Q04670 | SPP1 | YPL138C | 1062 nt | | 19,31 | ■□□□□ 0,68 | |
TY1B-MR2 | Q04670 | NAB2 | YGL122C | 1578 nt | | 19,31 | ■□□□□ 0,68 | |
TY1B-MR2 | Q04670 | UBX6 | YJL048C | 1191 nt | | 19,29 | ■□□□□ 0,68 | |
TY1B-MR2 | Q04670 | MRPL8 | YJL063C | 717 nt | | 19,29 | ■□□□□ 0,68 | |
TY1B-MR2 | Q04670 | RTG1 | YOL067C | 534 nt | | 19,28 | ■□□□□ 0,68 | |
TY1B-MR2 | Q04670 | IMP2' | YIL154C | 1041 nt | | 19,21 | ■□□□□ 0,67 | |
Retrieved 100 of 7,029 protein–RNA pairs in 10,4 ms