RNA–Protein interactions for RNA: YJL138C

TIF2, Transcript of Translation initiation factor eIF4A, yeast

Gene TIF2, Length 1,188 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF2	YJL138C	DRS1	P32892	752 aa	Known RBP	15.13	■□□□□ 0.01
TIF2	YJL138C	MTC1	P47018	478 aa	Known RBP	15.1	■□□□□ 0.01
TIF2	YJL138C	FAP1	P53971	965 aa		14.14	□□□□□ -0.15
TIF2	YJL138C	BFR2	Q06631	534 aa	Known RBP	13.6	□□□□□ -0.23
TIF2	YJL138C	TFA1	P36100	482 aa		13.45	□□□□□ -0.26
TIF2	YJL138C	MON2	P48563	1636 aa	Predicted RBP	13.3	□□□□□ -0.28
TIF2	YJL138C	PRY3	P47033	881 aa		13.26	□□□□□ -0.29
TIF2	YJL138C	INO80	P53115	1489 aa		13.19	□□□□□ -0.3
TIF2	YJL138C	PRI1	P10363	409 aa		12.94	□□□□□ -0.34
TIF2	YJL138C	AAD16	Q02895	342 aa		12.93	□□□□□ -0.34
TIF2	YJL138C	RQC2	Q12532	1038 aa	Known RBP	12.86	□□□□□ -0.35
TIF2	YJL138C	ISW2	Q08773	1120 aa		12.63	□□□□□ -0.39
TIF2	YJL138C	DNA2	P38859	1522 aa		12.57	□□□□□ -0.4
TIF2	YJL138C	SWR1	Q05471	1514 aa		12.57	□□□□□ -0.4
TIF2	YJL138C	RPG1	P38249	964 aa	Known RBP	12.55	□□□□□ -0.4
TIF2	YJL138C	AVT3	P36062	692 aa		12.53	□□□□□ -0.4
TIF2	YJL138C	TCB3	Q03640	1545 aa	Known RBP	12.5	□□□□□ -0.41
TIF2	YJL138C	DIP2	Q12220	943 aa	Predicted RBP	12.49	□□□□□ -0.41
TIF2	YJL138C	KOG1	P38873	1557 aa		12.45	□□□□□ -0.42
TIF2	YJL138C	TY1B-DR4	Q07793	1604 aa		12.44	□□□□□ -0.42
TIF2	YJL138C	YCK3	P39962	524 aa		12.4	□□□□□ -0.42
TIF2	YJL138C	HAA1	Q12753	694 aa	Known RBP	12.34	□□□□□ -0.43
TIF2	YJL138C	TSR3	Q12094	313 aa	Known RBP	12.29	□□□□□ -0.44
TIF2	YJL138C	SGS1	P35187	1447 aa		12.13	□□□□□ -0.47
TIF2	YJL138C	RSE1	Q04693	1361 aa	Known RBP	12.12	□□□□□ -0.47
TIF2	YJL138C	HSL1	P34244	1518 aa		11.94	□□□□□ -0.5
TIF2	YJL138C	SPT6	P23615	1451 aa	Known RBP	11.93	□□□□□ -0.5
TIF2	YJL138C	MRPL32	P25348	183 aa		11.78	□□□□□ -0.52
TIF2	YJL138C	SPA2	P23201	1466 aa	Known RBP	11.76	□□□□□ -0.53
TIF2	YJL138C	ECM5	Q03214	1411 aa		11.7	□□□□□ -0.54
TIF2	YJL138C	TAF7	Q05021	590 aa		11.69	□□□□□ -0.54
TIF2	YJL138C	THO2	P53552	1597 aa	Known RBP	11.68	□□□□□ -0.54
TIF2	YJL138C	HIR3	P47171	1648 aa		11.67	□□□□□ -0.54
TIF2	YJL138C	BUD4	P47136	1447 aa		11.65	□□□□□ -0.54
TIF2	YJL138C	RPL17A	P05740	184 aa	Known RBP	11.59	□□□□□ -0.55
TIF2	YJL138C	REB1	P21538	810 aa		11.59	□□□□□ -0.55
TIF2	YJL138C	RPL17B	P46990	184 aa	Known RBP	11.59	□□□□□ -0.55
TIF2	YJL138C	DMA1	P38823	416 aa		11.52	□□□□□ -0.57
TIF2	YJL138C	MDS3	P53094	1487 aa		11.51	□□□□□ -0.57
TIF2	YJL138C	PEP1	P32319	1579 aa		11.43	□□□□□ -0.58
TIF2	YJL138C	XRN1	P22147	1528 aa	Known RBP	11.39	□□□□□ -0.59
TIF2	YJL138C	REV3	P14284	1504 aa		11.37	□□□□□ -0.59
TIF2	YJL138C	YGL015C	P33199	130 aa		11.37	□□□□□ -0.59
TIF2	YJL138C	ATG2	P53855	1592 aa		11.29	□□□□□ -0.6
TIF2	YJL138C	BPT1	P14772	1559 aa		11.22	□□□□□ -0.61
TIF2	YJL138C	SIN3	P22579	1536 aa		11.14	□□□□□ -0.63
TIF2	YJL138C	SSK2	P53599	1579 aa		11.14	□□□□□ -0.63
TIF2	YJL138C	LEO1	P38439	464 aa		11.13	□□□□□ -0.63
TIF2	YJL138C	CDC27	P38042	758 aa		11.11	□□□□□ -0.63
TIF2	YJL138C	SSN2	P38931	1420 aa		11.1	□□□□□ -0.63
TIF2	YJL138C	PTP3	P40048	928 aa		11.1	□□□□□ -0.63
TIF2	YJL138C	YCF1	P39109	1515 aa	Known RBP	11.04	□□□□□ -0.64
TIF2	YJL138C	SKI3	P17883	1432 aa	Known RBP	11.01	□□□□□ -0.65
TIF2	YJL138C	YKR023W	P36119	530 aa	Known RBP	10.99	□□□□□ -0.65
TIF2	YJL138C	SPT21	P35209	758 aa		10.97	□□□□□ -0.65
TIF2	YJL138C	TAF2	P23255	1407 aa		10.92	□□□□□ -0.66
TIF2	YJL138C	ESP1	Q03018	1630 aa		10.91	□□□□□ -0.66
TIF2	YJL138C	UFD4	P33202	1483 aa		10.87	□□□□□ -0.67
TIF2	YJL138C	YPK9	Q12697	1472 aa		10.86	□□□□□ -0.67
TIF2	YJL138C	HO	P09932	586 aa		10.84	□□□□□ -0.67
TIF2	YJL138C	MET5	P47169	1442 aa		10.84	□□□□□ -0.67
TIF2	YJL138C	DCD1	P06773	312 aa		10.83	□□□□□ -0.68
TIF2	YJL138C	SCC2	Q04002	1493 aa		10.82	□□□□□ -0.68
TIF2	YJL138C	MAP2	P38174	421 aa	Known RBP	10.81	□□□□□ -0.68
TIF2	YJL138C	RPO31	P04051	1460 aa		10.8	□□□□□ -0.68
TIF2	YJL138C	MYO2	P19524	1574 aa	Known RBP	10.78	□□□□□ -0.68
TIF2	YJL138C	SSP1	P38871	571 aa		10.78	□□□□□ -0.68
TIF2	YJL138C	CHD1	P32657	1468 aa		10.77	□□□□□ -0.69
TIF2	YJL138C	TFC8	Q12308	588 aa		10.76	□□□□□ -0.69
TIF2	YJL138C	CDC25	P04821	1589 aa		10.75	□□□□□ -0.69
TIF2	YJL138C	UBP10	P53874	792 aa	Predicted RBP	10.75	□□□□□ -0.69
TIF2	YJL138C	LTE1	P07866	1435 aa		10.72	□□□□□ -0.69
TIF2	YJL138C	DNF1	P32660	1571 aa		10.7	□□□□□ -0.7
TIF2	YJL138C	RIM101	P33400	625 aa		10.7	□□□□□ -0.7
TIF2	YJL138C	MIF2	P35201	549 aa		10.69	□□□□□ -0.7
TIF2	YJL138C	PAN1	P32521	1480 aa		10.66	□□□□□ -0.7
TIF2	YJL138C	TY2B-LR1	P0C2J3	1770 aa		10.65	□□□□□ -0.71
TIF2	YJL138C	TY2B-F	P0CX63	1770 aa		10.65	□□□□□ -0.71
TIF2	YJL138C	TY2B-GR2	P0CX64	1770 aa		10.65	□□□□□ -0.71
TIF2	YJL138C	TY2B-C	P25384	1770 aa		10.65	□□□□□ -0.71
TIF2	YJL138C	TY2B-DR2	Q03494	1770 aa		10.65	□□□□□ -0.71
TIF2	YJL138C	TY1B-DR1	Q03855	1755 aa		10.65	□□□□□ -0.71
TIF2	YJL138C	TY2B-DR3	Q07791	1770 aa	Known RBP	10.65	□□□□□ -0.71
TIF2	YJL138C	TY2B-OR1	Q12113	1770 aa		10.65	□□□□□ -0.71
TIF2	YJL138C	TY2B-DR1	Q12472	1770 aa		10.65	□□□□□ -0.71
TIF2	YJL138C	TY2B-OR2	Q12501	1770 aa		10.65	□□□□□ -0.71
TIF2	YJL138C	RKR1	Q04781	1562 aa		10.65	□□□□□ -0.71
TIF2	YJL138C	LEU3	P08638	886 aa		10.64	□□□□□ -0.71
TIF2	YJL138C	ESC1	Q03661	1658 aa	Known RBP	10.63	□□□□□ -0.71
TIF2	YJL138C	TY1B-BR	Q12193	1756 aa		10.63	□□□□□ -0.71
TIF2	YJL138C	TY1B-GR3	Q12316	1755 aa		10.63	□□□□□ -0.71
TIF2	YJL138C	TY1B-OR	Q92393	1755 aa		10.63	□□□□□ -0.71
TIF2	YJL138C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	10.62	□□□□□ -0.71	not detected
TIF2	YJL138C	TOP2	P06786	1428 aa	Known RBP	10.59	□□□□□ -0.71
TIF2	YJL138C	RPA190	P10964	1664 aa	Known RBP	10.59	□□□□□ -0.71
TIF2	YJL138C	BNI1	P41832	1953 aa		10.58	□□□□□ -0.72
TIF2	YJL138C	SCY1	P53009	804 aa		10.56	□□□□□ -0.72
TIF2	YJL138C	GEA2	P39993	1459 aa	Known RBP	10.54	□□□□□ -0.72
TIF2	YJL138C	TY1B-H	O13535	1793 aa		10.52	□□□□□ -0.72
TIF2	YJL138C	TY1B-DR5	P0C2I2	1755 aa		10.52	□□□□□ -0.72

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms