RNA–Protein interactions for RNA: YJL052W

TDH1, Transcript of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), isozyme 1, yeastyeast

Gene TDH1, Length 999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDH1YJL052W MTC1P47018 478 aaKnown RBP16.83■□□□□ 0.28
TDH1YJL052W DRS1P32892 752 aaKnown RBP16.73■□□□□ 0.27
TDH1YJL052W MON2P48563 1636 aaPredicted RBP15.48■□□□□ 0.07
TDH1YJL052W INO80P53115 1489 aa15.43■□□□□ 0.06
TDH1YJL052W TCB3Q03640 1545 aaKnown RBP14.95□□□□□ -0.02
TDH1YJL052W SGS1P35187 1447 aa14.87□□□□□ -0.03
TDH1YJL052W TY1B-DR4Q07793 1604 aa14.86□□□□□ -0.03
TDH1YJL052W SWR1Q05471 1514 aa14.85□□□□□ -0.03
TDH1YJL052W DNA2P38859 1522 aa14.71□□□□□ -0.05
TDH1YJL052W KOG1P38873 1557 aa14.59□□□□□ -0.07
TDH1YJL052W HSL1P34244 1518 aa14.41□□□□□ -0.1
TDH1YJL052W BFR2Q06631 534 aaKnown RBP14.4□□□□□ -0.1
TDH1YJL052W SPT6P23615 1451 aaKnown RBP14.38□□□□□ -0.11
TDH1YJL052W DIP2Q12220 943 aaPredicted RBP14.3□□□□□ -0.12
TDH1YJL052W SPA2P23201 1466 aaKnown RBP14.27□□□□□ -0.12
TDH1YJL052W HIR3P47171 1648 aa14.11□□□□□ -0.15
TDH1YJL052W AVT3P36062 692 aa14.05□□□□□ -0.16
TDH1YJL052W FAP1P53971 965 aa14.03□□□□□ -0.16
TDH1YJL052W RSE1Q04693 1361 aaKnown RBP14.02□□□□□ -0.17
TDH1YJL052W ECM5Q03214 1411 aa13.92□□□□□ -0.18
TDH1YJL052W THO2P53552 1597 aaKnown RBP13.92□□□□□ -0.18
TDH1YJL052W BUD4P47136 1447 aa13.89□□□□□ -0.19
TDH1YJL052W XRN1P22147 1528 aaKnown RBP13.88□□□□□ -0.19
TDH1YJL052W SSN2P38931 1420 aa13.83□□□□□ -0.2
TDH1YJL052W ISW2Q08773 1120 aa13.76□□□□□ -0.21
TDH1YJL052W MDS3P53094 1487 aa13.72□□□□□ -0.21
TDH1YJL052W REV3P14284 1504 aa13.65□□□□□ -0.22
TDH1YJL052W PEP1P32319 1579 aa13.62□□□□□ -0.23
TDH1YJL052W PRI1P10363 409 aa13.61□□□□□ -0.23
TDH1YJL052W ATG2P53855 1592 aa13.59□□□□□ -0.23
TDH1YJL052W RPG1P38249 964 aaKnown RBP13.56□□□□□ -0.24
TDH1YJL052W SIN3P22579 1536 aa13.52□□□□□ -0.25
TDH1YJL052W TAF2P23255 1407 aa13.45□□□□□ -0.26
TDH1YJL052W AAD16Q02895 342 aa13.42□□□□□ -0.26
TDH1YJL052W TFA1P36100 482 aa13.41□□□□□ -0.26
TDH1YJL052W SSK2P53599 1579 aa13.41□□□□□ -0.26
TDH1YJL052W SKI3P17883 1432 aaKnown RBP13.4□□□□□ -0.26
TDH1YJL052W BPT1P14772 1559 aa13.36□□□□□ -0.27
TDH1YJL052W ESP1Q03018 1630 aa13.35□□□□□ -0.27
TDH1YJL052W MYO2P19524 1574 aaKnown RBP13.22□□□□□ -0.29
TDH1YJL052W YPK9Q12697 1472 aa13.16□□□□□ -0.3
TDH1YJL052W UFD4P33202 1483 aa13.14□□□□□ -0.31
TDH1YJL052W YCF1P39109 1515 aaKnown RBP13.13□□□□□ -0.31
TDH1YJL052W PRY3P47033 881 aa13.13□□□□□ -0.31
TDH1YJL052W SCC2Q04002 1493 aa13.11□□□□□ -0.31
TDH1YJL052W RPL17AP05740 184 aaKnown RBP13.06□□□□□ -0.32
TDH1YJL052W RPL17BP46990 184 aaKnown RBP13.06□□□□□ -0.32
TDH1YJL052W RPO31P04051 1460 aa13.03□□□□□ -0.32
TDH1YJL052W TY2B-LR1P0C2J3 1770 aa12.95□□□□□ -0.34
TDH1YJL052W TY2B-FP0CX63 1770 aa12.95□□□□□ -0.34
TDH1YJL052W TY2B-GR2P0CX64 1770 aa12.95□□□□□ -0.34
TDH1YJL052W TY2B-CP25384 1770 aa12.95□□□□□ -0.34
TDH1YJL052W TY2B-DR2Q03494 1770 aa12.95□□□□□ -0.34
TDH1YJL052W TY1B-DR1Q03855 1755 aa12.95□□□□□ -0.34
TDH1YJL052W TY2B-DR3Q07791 1770 aaKnown RBP12.95□□□□□ -0.34
TDH1YJL052W TY2B-OR1Q12113 1770 aa12.95□□□□□ -0.34
TDH1YJL052W TY2B-DR1Q12472 1770 aa12.95□□□□□ -0.34
TDH1YJL052W TY2B-OR2Q12501 1770 aa12.95□□□□□ -0.34
TDH1YJL052W REB1P21538 810 aa12.93□□□□□ -0.34
TDH1YJL052W TSR3Q12094 313 aaKnown RBP12.93□□□□□ -0.34
TDH1YJL052W CDC25P04821 1589 aa12.92□□□□□ -0.34
TDH1YJL052W CHD1P32657 1468 aa12.9□□□□□ -0.34
TDH1YJL052W ESC1Q03661 1658 aaKnown RBP12.86□□□□□ -0.35
TDH1YJL052W TY1B-BRQ12193 1756 aa12.86□□□□□ -0.35
TDH1YJL052W TY1B-GR3Q12316 1755 aa12.86□□□□□ -0.35
TDH1YJL052W TY1B-ORQ92393 1755 aa12.86□□□□□ -0.35
TDH1YJL052W TOP2P06786 1428 aaKnown RBP12.86□□□□□ -0.35
TDH1YJL052W RKR1Q04781 1562 aa12.84□□□□□ -0.35
TDH1YJL052W RQC2Q12532 1038 aaKnown RBP12.83□□□□□ -0.36
TDH1YJL052W POL1P13382 1468 aa12.83□□□□□ -0.36
TDH1YJL052W TY2B-BQ12491 1770 aa12.81□□□□□ -0.36
TDH1YJL052W PAN1P32521 1480 aa12.79□□□□□ -0.36
TDH1YJL052W TY1B-DR3Q99231 1755 aa12.79□□□□□ -0.36
TDH1YJL052W DNF1P32660 1571 aa12.78□□□□□ -0.36
TDH1YJL052W TY1B-HO13535 1793 aa12.77□□□□□ -0.36
TDH1YJL052W TY1B-DR5P0C2I2 1755 aa12.77□□□□□ -0.36
TDH1YJL052W TY1B-DR6P0C2I3 1755 aa12.77□□□□□ -0.36
TDH1YJL052W TY1B-LR2P0C2I5 1755 aa12.77□□□□□ -0.36
TDH1YJL052W TY1B-LR3P0C2I6 1755 aaKnown RBP12.77□□□□□ -0.36
TDH1YJL052W TY1B-PR1P0C2I9 1755 aaKnown RBP12.77□□□□□ -0.36
TDH1YJL052W TY1B-PR2P0C2J0 1756 aa12.77□□□□□ -0.36
TDH1YJL052W TY1B-PR3P0C2J1 1755 aaKnown RBP12.77□□□□□ -0.36
TDH1YJL052W TY1B-JR1P47098 1755 aa12.77□□□□□ -0.36
TDH1YJL052W TY1B-ML2Q03434 1755 aaKnown RBP12.77□□□□□ -0.36
TDH1YJL052W TY1B-ER1Q03612 1755 aa12.77□□□□□ -0.36
TDH1YJL052W TY1B-ML1Q04711 1755 aaKnown RBP12.77□□□□□ -0.36
TDH1YJL052W TY1B-GR2Q12269 1755 aa12.77□□□□□ -0.36
TDH1YJL052W TY1B-OLQ12273 1755 aa12.77□□□□□ -0.36
TDH1YJL052W TY1B-PLQ12414 1755 aaKnown RBP12.77□□□□□ -0.36
TDH1YJL052W MET5P47169 1442 aa12.73□□□□□ -0.37
TDH1YJL052W STU1P38198 1513 aa12.72□□□□□ -0.37
TDH1YJL052W MMS22Q06164 1454 aa12.72□□□□□ -0.37
TDH1YJL052W RPA190P10964 1664 aaKnown RBP12.71□□□□□ -0.37
TDH1YJL052W YOR1P53049 1477 aa12.71□□□□□ -0.38
TDH1YJL052W SMC4Q12267 1418 aa12.7□□□□□ -0.38
TDH1YJL052W TRM732Q03496 1420 aa12.62□□□□□ -0.39
TDH1YJL052W SPP41P38904 1435 aa12.59□□□□□ -0.39
TDH1YJL052W LTE1P07866 1435 aa12.56□□□□□ -0.4
TDH1YJL052W SPT21P35209 758 aa12.54□□□□□ -0.4
TDH1YJL052W TY1B-JR2P47100 1755 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms