RNA–Protein interactions for RNA: YHR065C

RRP3, Transcript of Protein involved in rRNA processing, yeastyeast

Gene RRP3, Length 1,506 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP3YHR065C MTC1P47018 478 aaKnown RBP12.62□□□□□ -0.39
RRP3YHR065C DRS1P32892 752 aaKnown RBP11.88□□□□□ -0.51
RRP3YHR065C FAP1P53971 965 aa11.21□□□□□ -0.61
RRP3YHR065C PRI1P10363 409 aa10.58□□□□□ -0.72
RRP3YHR065C PRY3P47033 881 aa10.52□□□□□ -0.73
RRP3YHR065C AAD16Q02895 342 aa10.51□□□□□ -0.73
RRP3YHR065C ISW2Q08773 1120 aa10.46□□□□□ -0.74
RRP3YHR065C DIP2Q12220 943 aaPredicted RBP10.39□□□□□ -0.75
RRP3YHR065C RPG1P38249 964 aaKnown RBP10.32□□□□□ -0.76
RRP3YHR065C AVT3P36062 692 aa10.05□□□□□ -0.8
RRP3YHR065C RSE1Q04693 1361 aaKnown RBP10.02□□□□□ -0.8
RRP3YHR065C TSR3Q12094 313 aaKnown RBP9.97□□□□□ -0.81
RRP3YHR065C BFR2Q06631 534 aaKnown RBP9.94□□□□□ -0.82
RRP3YHR065C HAA1Q12753 694 aaKnown RBP9.93□□□□□ -0.82
RRP3YHR065C YCK3P39962 524 aa9.92□□□□□ -0.82
RRP3YHR065C RPL17AP05740 184 aaKnown RBP9.67□□□□□ -0.86
RRP3YHR065C RPL17BP46990 184 aaKnown RBP9.67□□□□□ -0.86
RRP3YHR065C REB1P21538 810 aa9.64□□□□□ -0.87
RRP3YHR065C MRPL32P25348 183 aa9.63□□□□□ -0.87
RRP3YHR065C SPT21P35209 758 aa9.27□□□□□ -0.93
RRP3YHR065C YGL015CP33199 130 aa9.22□□□□□ -0.93
RRP3YHR065C YKR023WP36119 530 aaKnown RBP9.15□□□□□ -0.95
RRP3YHR065C CDC27P38042 758 aa9.13□□□□□ -0.95
RRP3YHR065C RIM101P33400 625 aa9□□□□□ -0.97
RRP3YHR065C TFC8Q12308 588 aa8.97□□□□□ -0.97
RRP3YHR065C HOP09932 586 aa8.94□□□□□ -0.98
RRP3YHR065C UBP10P53874 792 aaPredicted RBP8.9□□□□□ -0.98
RRP3YHR065C DCD1P06773 312 aa8.87□□□□□ -0.99
RRP3YHR065C TFA1P36100 482 aa8.84□□□□□ -0.99
RRP3YHR065C MAP2P38174 421 aaKnown RBP8.84□□□□□ -0.99
RRP3YHR065C SCY1P53009 804 aa8.68□□□□□ -1.02
RRP3YHR065C OXP1P28273 1286 aa8.67□□□□□ -1.02
RRP3YHR065C BCH2P36122 765 aa8.67□□□□□ -1.02
RRP3YHR065C SGS1P35187 1447 aa8.63□□□□□ -1.03
RRP3YHR065C SLX5P32828 619 aaKnown RBP8.59□□□□□ -1.03
RRP3YHR065C YIL055CP40523 627 aaKnown RBP8.57□□□□□ -1.04
RRP3YHR065C TIF4632P39936 914 aaKnown RBP8.54□□□□□ -1.04
RRP3YHR065C PTP3P40048 928 aa8.54□□□□□ -1.04
RRP3YHR065C INO80P53115 1489 aa8.54□□□□□ -1.04
RRP3YHR065C TGL3P40308 642 aa8.51□□□□□ -1.05
RRP3YHR065C EPS1P40557 701 aa8.46□□□□□ -1.05
RRP3YHR065C TCB3Q03640 1545 aaKnown RBP8.45□□□□□ -1.06
RRP3YHR065C RSM7P47150 247 aa8.44□□□□□ -1.06
RRP3YHR065C BDF1P35817 686 aa8.43□□□□□ -1.06
RRP3YHR065C YAH1Q12184 172 aaKnown RBP8.41□□□□□ -1.06
RRP3YHR065C MON2P48563 1636 aaPredicted RBP8.41□□□□□ -1.06
RRP3YHR065C BUD31P25337 157 aaPredicted RBP8.39□□□□□ -1.07
RRP3YHR065C BBC1P47068 1157 aa8.37□□□□□ -1.07
RRP3YHR065C TY1B-DR4Q07793 1604 aa8.34□□□□□ -1.07
RRP3YHR065C AI2P03876 854 aa8.34□□□□□ -1.07
RRP3YHR065C YLR271WQ06152 274 aa8.3□□□□□ -1.08
RRP3YHR065C SSP1P38871 571 aa8.24□□□□□ -1.09
RRP3YHR065C UBP9P39967 754 aa8.23□□□□□ -1.09
RRP3YHR065C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.21□□□□□ -1.1not detected
RRP3YHR065C SPA2P23201 1466 aaKnown RBP8.2□□□□□ -1.1
RRP3YHR065C SWR1Q05471 1514 aa8.19□□□□□ -1.1
RRP3YHR065C NSR1P27476 414 aaKnown RBP RIP-Chip data8.19□□□□□ -1.1not detected
RRP3YHR065C PSD2P53037 1138 aaKnown RBP8.18□□□□□ -1.1
RRP3YHR065C SSN2P38931 1420 aa8.18□□□□□ -1.1
RRP3YHR065C MST1P07236 462 aa8.17□□□□□ -1.1
RRP3YHR065C HSL1P34244 1518 aa8.14□□□□□ -1.11
RRP3YHR065C YOR238WQ08634 303 aa8.14□□□□□ -1.11
RRP3YHR065C SPT6P23615 1451 aaKnown RBP8.12□□□□□ -1.11
RRP3YHR065C YAP5P40574 245 aa8.1□□□□□ -1.11
RRP3YHR065C MRM1P25270 412 aa8.04□□□□□ -1.12
RRP3YHR065C MGA2P40578 1113 aa8.04□□□□□ -1.12
RRP3YHR065C CST9Q06032 482 aa8□□□□□ -1.13
RRP3YHR065C SIS1P25294 352 aaKnown RBP7.99□□□□□ -1.13
RRP3YHR065C HIR3P47171 1648 aa7.99□□□□□ -1.13
RRP3YHR065C DNA2P38859 1522 aa7.98□□□□□ -1.13
RRP3YHR065C YBL029C-AQ3E756 94 aa7.97□□□□□ -1.13
RRP3YHR065C KOG1P38873 1557 aa7.97□□□□□ -1.13
RRP3YHR065C VNX1P42839 908 aa7.93□□□□□ -1.14
RRP3YHR065C XRN1P22147 1528 aaKnown RBP7.91□□□□□ -1.14
RRP3YHR065C RTG3P38165 486 aa7.91□□□□□ -1.14
RRP3YHR065C GTT3P39996 337 aa7.91□□□□□ -1.14
RRP3YHR065C YMR1P47147 688 aaKnown RBP RIP-Chip data7.88□□□□□ -1.15not detected
RRP3YHR065C VPS29P38759 282 aa7.87□□□□□ -1.15
RRP3YHR065C PIB1Q06651 286 aa7.87□□□□□ -1.15
RRP3YHR065C WSC3Q12215 556 aa7.87□□□□□ -1.15
RRP3YHR065C SPP1Q03012 353 aa7.85□□□□□ -1.15
RRP3YHR065C DBP1P24784 617 aaKnown RBP7.81□□□□□ -1.16
RRP3YHR065C REV3P14284 1504 aa7.8□□□□□ -1.16
RRP3YHR065C TIF11P38912 153 aaKnown RBP7.8□□□□□ -1.16
RRP3YHR065C THO2P53552 1597 aaKnown RBP7.8□□□□□ -1.16
RRP3YHR065C RCR1P38212 213 aa7.78□□□□□ -1.16
RRP3YHR065C SIN3P22579 1536 aa7.78□□□□□ -1.16
RRP3YHR065C BUD4P47136 1447 aa7.77□□□□□ -1.17
RRP3YHR065C STS1P38637 319 aa7.77□□□□□ -1.17
RRP3YHR065C YFR006WP43590 535 aa7.77□□□□□ -1.17
RRP3YHR065C MSB4Q12317 492 aa7.75□□□□□ -1.17
RRP3YHR065C ECM5Q03214 1411 aa7.74□□□□□ -1.17
RRP3YHR065C VMA1P17255 1071 aaKnown RBP7.73□□□□□ -1.17
RRP3YHR065C SSK2P53599 1579 aa7.71□□□□□ -1.18
RRP3YHR065C EAP1P36041 632 aaKnown RBP7.71□□□□□ -1.18
RRP3YHR065C ULI1P43604 169 aa7.71□□□□□ -1.18
RRP3YHR065C YOL036WQ08206 761 aa7.7□□□□□ -1.18
RRP3YHR065C SAM3Q08986 587 aa7.7□□□□□ -1.18
RRP3YHR065C IOC2Q12072 812 aa7.68□□□□□ -1.18
RRP3YHR065C SET4P42948 560 aa7.68□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms